RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 EEF2P13639 858 aaKnown RBP22.81■■□□□ 1.24
SMN2-215ENST00000628696 C16orf86Q6ZW13 317 aa22.81■■□□□ 1.24
SMN2-215ENST00000628696 FCER1AP12319 257 aa22.8■■□□□ 1.24
SMN2-215ENST00000628696 TMEM132BQ14DG7 1078 aa22.8■■□□□ 1.24
SMN2-215ENST00000628696 ZSCAN25Q6NSZ9 544 aa22.8■■□□□ 1.24
SMN2-215ENST00000628696 LRRCC1Q9C099 1032 aa22.8■■□□□ 1.24
SMN2-215ENST00000628696 FBXO28Q9NVF7 368 aa22.8■■□□□ 1.24
SMN2-215ENST00000628696 MTMR10Q9NXD2 777 aa22.8■■□□□ 1.24
SMN2-215ENST00000628696 SMARCA5O60264 1052 aaPredicted RBP22.79■■□□□ 1.24
SMN2-215ENST00000628696 SLC25A27O95847 323 aa22.79■■□□□ 1.24
SMN2-215ENST00000628696 CTR9Q6PD62 1173 aa22.79■■□□□ 1.24
SMN2-215ENST00000628696 ABRAQ8N0Z2 381 aa22.79■■□□□ 1.24
SMN2-215ENST00000628696 MAML3Q96JK9 1138 aa22.79■■□□□ 1.24
SMN2-215ENST00000628696 PUS7LQ9H0K6 701 aaKnown RBP22.79■■□□□ 1.24
SMN2-215ENST00000628696 KANSL2Q9H9L4 492 aa22.79■■□□□ 1.24
SMN2-215ENST00000628696 DNAH12Q6ZR08 3092 aa22.78■■□□□ 1.24
SMN2-215ENST00000628696 COL6A3P12111 3177 aa22.78■■□□□ 1.24
SMN2-215ENST00000628696 SLC39A5Q6ZMH5 540 aa22.78■■□□□ 1.24
SMN2-215ENST00000628696 STK11IPQ8N1F8 1099 aa22.78■■□□□ 1.24
SMN2-215ENST00000628696 MMP19Q99542 508 aa22.78■■□□□ 1.24
SMN2-215ENST00000628696 GOPCQ9HD26 462 aa22.78■■□□□ 1.24
SMN2-215ENST00000628696 RCAN3Q9UKA8 241 aa22.78■■□□□ 1.24
SMN2-215ENST00000628696 FERMT2Q96AC1 680 aa22.77■■□□□ 1.24
SMN2-215ENST00000628696 PRDM5Q9NQX1 630 aaPredicted RBP22.77■■□□□ 1.24
SMN2-215ENST00000628696 STXBP5LQ9Y2K9 1186 aa22.77■■□□□ 1.24
SMN2-215ENST00000628696 PGK2P07205 417 aa22.76■■□□□ 1.23
SMN2-215ENST00000628696 ADCYAP1R1P41586 468 aa22.76■■□□□ 1.23
SMN2-215ENST00000628696 FAM83BQ5T0W9 1011 aa22.76■■□□□ 1.23
SMN2-215ENST00000628696 ADAMTS5Q9UNA0 930 aa22.76■■□□□ 1.23
SMN2-215ENST00000628696 PLXNA1Q9UIW2 1896 aa22.76■■□□□ 1.23
SMN2-215ENST00000628696 STAT3P40763 770 aa22.75■■□□□ 1.23
SMN2-215ENST00000628696 KCTD2Q14681 263 aa22.75■■□□□ 1.23
SMN2-215ENST00000628696 LRRC41Q15345 812 aa22.75■■□□□ 1.23
SMN2-215ENST00000628696 TRIM60Q495X7 471 aa22.75■■□□□ 1.23
SMN2-215ENST00000628696 FAM47AQ5JRC9 791 aa22.75■■□□□ 1.23
SMN2-215ENST00000628696 C20orf194Q5TEA3 1177 aa22.75■■□□□ 1.23
SMN2-215ENST00000628696 RIOX2Q8IUF8 465 aa22.75■■□□□ 1.23
SMN2-215ENST00000628696 ARPP21Q9UBL0 812 aaPredicted RBP22.75■■□□□ 1.23
SMN2-215ENST00000628696 PPP1R9AQ9ULJ8 1098 aa22.75■■□□□ 1.23
SMN2-215ENST00000628696 VWA5AO00534 786 aa22.74■■□□□ 1.23
SMN2-215ENST00000628696 STRBPQ96SI9 672 aaKnown RBP22.74■■□□□ 1.23
SMN2-215ENST00000628696 MKNK2Q9HBH9 465 aa22.74■■□□□ 1.23
SMN2-215ENST00000628696 ECHDC1Q9NTX5 307 aa22.74■■□□□ 1.23
SMN2-215ENST00000628696 MINDY4BA8MYZ0 360 aa22.73■■□□□ 1.23
SMN2-215ENST00000628696 RARBP10826 455 aa22.73■■□□□ 1.23
SMN2-215ENST00000628696 NUP88Q99567 741 aaPredicted RBP22.73■■□□□ 1.23
SMN2-215ENST00000628696 TINF2Q9BSI4 451 aa22.73■■□□□ 1.23
SMN2-215ENST00000628696 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.73■■□□□ 1.23
SMN2-215ENST00000628696 LTBP2Q14767 1821 aa22.73■■□□□ 1.23
SMN2-215ENST00000628696 FAM161BQ96MY7 647 aa22.72■■□□□ 1.23
SMN2-215ENST00000628696 XPNPEP3Q9NQH7 507 aa22.72■■□□□ 1.23
SMN2-215ENST00000628696 SLC4A3P48751 1232 aa22.71■■□□□ 1.23
SMN2-215ENST00000628696 ZNF792Q3KQV3 632 aa22.71■■□□□ 1.23
SMN2-215ENST00000628696 SBK1Q52WX2 424 aa22.71■■□□□ 1.23
SMN2-215ENST00000628696 BADQ92934 168 aa22.71■■□□□ 1.23
SMN2-215ENST00000628696 NRBP1Q9UHY1 535 aa22.71■■□□□ 1.23
SMN2-215ENST00000628696 ZNF214Q9UL59 606 aaPredicted RBP22.71■■□□□ 1.23
SMN2-215ENST00000628696 GSG1L2A8MUP6 293 aa22.7■■□□□ 1.22
SMN2-215ENST00000628696 POTEB2H3BUK9 544 aa22.7■■□□□ 1.22
SMN2-215ENST00000628696 PGK1P00558 417 aa22.7■■□□□ 1.22
SMN2-215ENST00000628696 TAL1P17542 331 aaPredicted RBP22.7■■□□□ 1.22
SMN2-215ENST00000628696 RASA1P20936 1047 aa22.7■■□□□ 1.22
SMN2-215ENST00000628696 COPB2P35606 906 aa22.7■■□□□ 1.22
SMN2-215ENST00000628696 SNX17Q15036 470 aa22.7■■□□□ 1.22
SMN2-215ENST00000628696 SHHQ15465 462 aa22.7■■□□□ 1.22
SMN2-215ENST00000628696 REPS2Q8NFH8 660 aa22.7■■□□□ 1.22
SMN2-215ENST00000628696 SLF1Q9BQI6 1058 aa22.7■■□□□ 1.22
SMN2-215ENST00000628696 DIS3Q9Y2L1 958 aaKnown RBP22.7■■□□□ 1.22
SMN2-215ENST00000628696 TSHZ3Q63HK5 1081 aa22.69■■□□□ 1.22
SMN2-215ENST00000628696 FAM109BQ6ICB4 259 aaPredicted RBP22.69■■□□□ 1.22
SMN2-215ENST00000628696 SH3RF1Q7Z6J0 888 aa22.69■■□□□ 1.22
SMN2-215ENST00000628696 RNF180Q86T96 592 aa22.69■■□□□ 1.22
SMN2-215ENST00000628696 KBTBD3Q8NAB2 608 aa22.69■■□□□ 1.22
SMN2-215ENST00000628696 OSBP2Q969R2 916 aa22.69■■□□□ 1.22
SMN2-215ENST00000628696 GPATCH3Q96I76 525 aa22.69■■□□□ 1.22
SMN2-215ENST00000628696 PDLIM7Q9NR12 457 aa22.69■■□□□ 1.22
SMN2-215ENST00000628696 PHF24Q9UPV7 400 aa22.69■■□□□ 1.22
SMN2-215ENST00000628696 GREB1LQ9C091 1923 aaPredicted RBP22.69■■□□□ 1.22
SMN2-215ENST00000628696 MYH4Q9Y623 1939 aa22.69■■□□□ 1.22
SMN2-215ENST00000628696 F5H6K3 240 aa22.68■■□□□ 1.22
SMN2-215ENST00000628696 RNF113AO15541 343 aaKnown RBP22.68■■□□□ 1.22
SMN2-215ENST00000628696 APPP05067 770 aa22.68■■□□□ 1.22
SMN2-215ENST00000628696 TLE2Q04725 743 aa22.68■■□□□ 1.22
SMN2-215ENST00000628696 KLRC3Q07444 240 aa22.68■■□□□ 1.22
SMN2-215ENST00000628696 C9orf50Q5SZB4 431 aa22.68■■□□□ 1.22
SMN2-215ENST00000628696 SNRNP48Q6IEG0 339 aaKnown RBP22.68■■□□□ 1.22
SMN2-215ENST00000628696 GIMAP6Q6P9H5 292 aa22.68■■□□□ 1.22
SMN2-215ENST00000628696 APPBP2Q92624 585 aa22.68■■□□□ 1.22
SMN2-215ENST00000628696 DDX11Q96FC9 970 aa22.68■■□□□ 1.22
SMN2-215ENST00000628696 NYAP2Q9P242 653 aa22.68■■□□□ 1.22
SMN2-215ENST00000628696 CLIP2Q9UDT6 1046 aa22.68■■□□□ 1.22
SMN2-215ENST00000628696 CNPY2Q9Y2B0 182 aa22.68■■□□□ 1.22
SMN2-215ENST00000628696 CTDP1Q9Y5B0 961 aaPredicted RBP22.68■■□□□ 1.22
SMN2-215ENST00000628696 TRIM43BA6NCK2 446 aa22.67■■□□□ 1.22
SMN2-215ENST00000628696 NDUFB10O96000 172 aa22.67■■□□□ 1.22
SMN2-215ENST00000628696 TDO2P48775 406 aa22.67■■□□□ 1.22
SMN2-215ENST00000628696 ZNF697Q5TEC3 545 aa22.67■■□□□ 1.22
SMN2-215ENST00000628696 ZNF444Q8N0Y2 327 aaPredicted RBP22.67■■□□□ 1.22
SMN2-215ENST00000628696 CPXCR1Q8N123 301 aa22.67■■□□□ 1.22
SMN2-215ENST00000628696 TRIM43Q96BQ3 446 aaPredicted RBP22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms