RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 SLC39A5Q6ZMH5 540 aa21.43■■□□□ 1.02
SMN2-213ENST00000614240 MAML3Q96JK9 1138 aa21.43■■□□□ 1.02
SMN2-213ENST00000614240 PUS7LQ9H0K6 701 aaKnown RBP21.43■■□□□ 1.02
SMN2-213ENST00000614240 SMARCA5O60264 1052 aaPredicted RBP21.42■■□□□ 1.02
SMN2-213ENST00000614240 KCTD2Q14681 263 aa21.42■■□□□ 1.02
SMN2-213ENST00000614240 PRDM5Q9NQX1 630 aaPredicted RBP21.42■■□□□ 1.02
SMN2-213ENST00000614240 FBXO28Q9NVF7 368 aa21.42■■□□□ 1.02
SMN2-213ENST00000614240 MTMR10Q9NXD2 777 aa21.42■■□□□ 1.02
SMN2-213ENST00000614240 ARPP21Q9UBL0 812 aaPredicted RBP21.42■■□□□ 1.02
SMN2-213ENST00000614240 STAT3P40763 770 aa21.41■■□□□ 1.02
SMN2-213ENST00000614240 ADCYAP1R1P41586 468 aa21.41■■□□□ 1.02
SMN2-213ENST00000614240 FAM83BQ5T0W9 1011 aa21.41■■□□□ 1.02
SMN2-213ENST00000614240 STK11IPQ8N1F8 1099 aa21.41■■□□□ 1.02
SMN2-213ENST00000614240 FERMT2Q96AC1 680 aa21.41■■□□□ 1.02
SMN2-213ENST00000614240 STXBP5LQ9Y2K9 1186 aa21.41■■□□□ 1.02
SMN2-213ENST00000614240 VWA5AO00534 786 aa21.4■■□□□ 1.02
SMN2-213ENST00000614240 PGK2P07205 417 aa21.4■■□□□ 1.02
SMN2-213ENST00000614240 RIOX2Q8IUF8 465 aa21.4■■□□□ 1.02
SMN2-213ENST00000614240 GPATCH3Q96I76 525 aa21.4■■□□□ 1.02
SMN2-213ENST00000614240 MKNK2Q9HBH9 465 aa21.4■■□□□ 1.02
SMN2-213ENST00000614240 ECHDC1Q9NTX5 307 aa21.4■■□□□ 1.02
SMN2-213ENST00000614240 PPP1R9AQ9ULJ8 1098 aa21.4■■□□□ 1.02
SMN2-213ENST00000614240 ADAMTS5Q9UNA0 930 aa21.4■■□□□ 1.02
SMN2-213ENST00000614240 FRMPD3Q5JV73 1810 aa21.4■■□□□ 1.02
SMN2-213ENST00000614240 ZNF236Q9UL36 1845 aa21.4■■□□□ 1.02
SMN2-213ENST00000614240 SZT2Q5T011 3432 aa21.39■■□□□ 1.01
SMN2-213ENST00000614240 MINDY4BA8MYZ0 360 aa21.39■■□□□ 1.01
SMN2-213ENST00000614240 RARBP10826 455 aa21.39■■□□□ 1.01
SMN2-213ENST00000614240 COPB2P35606 906 aa21.39■■□□□ 1.01
SMN2-213ENST00000614240 LRRC41Q15345 812 aa21.39■■□□□ 1.01
SMN2-213ENST00000614240 TRIM60Q495X7 471 aa21.39■■□□□ 1.01
SMN2-213ENST00000614240 FAM47AQ5JRC9 791 aa21.39■■□□□ 1.01
SMN2-213ENST00000614240 STRBPQ96SI9 672 aaKnown RBP21.39■■□□□ 1.01
SMN2-213ENST00000614240 NRBP1Q9UHY1 535 aa21.39■■□□□ 1.01
SMN2-213ENST00000614240 BAZ2AQ9UIF9 1905 aaKnown RBP21.39■■□□□ 1.01
SMN2-213ENST00000614240 XPNPEP3Q9NQH7 507 aa21.38■■□□□ 1.01
SMN2-213ENST00000614240 A0A0G2JMZ2 1700 aa21.38■■□□□ 1.01
SMN2-213ENST00000614240 MYH8P13535 1937 aa21.37■■□□□ 1.01
SMN2-213ENST00000614240 RLFQ13129 1914 aa21.37■■□□□ 1.01
SMN2-213ENST00000614240 SLC4A3P48751 1232 aa21.37■■□□□ 1.01
SMN2-213ENST00000614240 SBK1Q52WX2 424 aa21.37■■□□□ 1.01
SMN2-213ENST00000614240 C20orf194Q5TEA3 1177 aa21.37■■□□□ 1.01
SMN2-213ENST00000614240 SLF1Q9BQI6 1058 aa21.37■■□□□ 1.01
SMN2-213ENST00000614240 TINF2Q9BSI4 451 aa21.37■■□□□ 1.01
SMN2-213ENST00000614240 CNPY2Q9Y2B0 182 aa21.37■■□□□ 1.01
SMN2-213ENST00000614240 DIS3Q9Y2L1 958 aaKnown RBP21.37■■□□□ 1.01
SMN2-213ENST00000614240 CTDP1Q9Y5B0 961 aaPredicted RBP21.37■■□□□ 1.01
SMN2-213ENST00000614240 APPP05067 770 aa21.36■■□□□ 1.01
SMN2-213ENST00000614240 RNF180Q86T96 592 aa21.36■■□□□ 1.01
SMN2-213ENST00000614240 KBTBD3Q8NAB2 608 aa21.36■■□□□ 1.01
SMN2-213ENST00000614240 NUP88Q99567 741 aaPredicted RBP21.36■■□□□ 1.01
SMN2-213ENST00000614240 ZNF214Q9UL59 606 aaPredicted RBP21.36■■□□□ 1.01
SMN2-213ENST00000614240 GSG1L2A8MUP6 293 aa21.35■■□□□ 1.01
SMN2-213ENST00000614240 RNF113AO15541 343 aaKnown RBP21.35■■□□□ 1.01
SMN2-213ENST00000614240 PGK1P00558 417 aa21.35■■□□□ 1.01
SMN2-213ENST00000614240 RASA1P20936 1047 aa21.35■■□□□ 1.01
SMN2-213ENST00000614240 ZNF792Q3KQV3 632 aa21.35■■□□□ 1.01
SMN2-213ENST00000614240 GIMAP6Q6P9H5 292 aa21.35■■□□□ 1.01
SMN2-213ENST00000614240 APPBP2Q92624 585 aa21.35■■□□□ 1.01
SMN2-213ENST00000614240 BADQ92934 168 aa21.35■■□□□ 1.01
SMN2-213ENST00000614240 DDX11Q96FC9 970 aa21.35■■□□□ 1.01
SMN2-213ENST00000614240 FAM161BQ96MY7 647 aa21.35■■□□□ 1.01
SMN2-213ENST00000614240 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.35■■□□□ 1.01
SMN2-213ENST00000614240 NYAP2Q9P242 653 aa21.35■■□□□ 1.01
SMN2-213ENST00000614240 F5H6K3 240 aa21.34■■□□□ 1.01
SMN2-213ENST00000614240 TAL1P17542 331 aaPredicted RBP21.34■■□□□ 1.01
SMN2-213ENST00000614240 TDO2P48775 406 aa21.34■■□□□ 1.01
SMN2-213ENST00000614240 KLRC3Q07444 240 aa21.34■■□□□ 1.01
SMN2-213ENST00000614240 SNX17Q15036 470 aa21.34■■□□□ 1.01
SMN2-213ENST00000614240 SHHQ15465 462 aa21.34■■□□□ 1.01
SMN2-213ENST00000614240 FAM109BQ6ICB4 259 aaPredicted RBP21.34■■□□□ 1.01
SMN2-213ENST00000614240 SNRNP48Q6IEG0 339 aaKnown RBP21.34■■□□□ 1.01
SMN2-213ENST00000614240 ZNF444Q8N0Y2 327 aaPredicted RBP21.34■■□□□ 1.01
SMN2-213ENST00000614240 OSBP2Q969R2 916 aa21.34■■□□□ 1.01
SMN2-213ENST00000614240 TEX13BQ9BXU2 312 aa21.34■■□□□ 1.01
SMN2-213ENST00000614240 ZNF287Q9HBT7 754 aa21.34■■□□□ 1.01
SMN2-213ENST00000614240 CLIP2Q9UDT6 1046 aa21.34■■□□□ 1.01
SMN2-213ENST00000614240 PHF24Q9UPV7 400 aa21.34■■□□□ 1.01
SMN2-213ENST00000614240 POTEB2H3BUK9 544 aa21.33■■□□□ 1.01
SMN2-213ENST00000614240 ZBED4O75132 1171 aa21.33■■□□□ 1.01
SMN2-213ENST00000614240 ZFYP08048 801 aaPredicted RBP21.33■■□□□ 1.01
SMN2-213ENST00000614240 AKR1A1P14550 325 aa21.33■■□□□ 1.01
SMN2-213ENST00000614240 GNAT2P19087 354 aa21.33■■□□□ 1.01
SMN2-213ENST00000614240 TLE2Q04725 743 aa21.33■■□□□ 1.01
SMN2-213ENST00000614240 ZNF697Q5TEC3 545 aa21.33■■□□□ 1.01
SMN2-213ENST00000614240 TSHZ3Q63HK5 1081 aa21.33■■□□□ 1.01
SMN2-213ENST00000614240 CPXCR1Q8N123 301 aa21.33■■□□□ 1.01
SMN2-213ENST00000614240 PRPF38AQ8NAV1 312 aaKnown RBP21.33■■□□□ 1.01
SMN2-213ENST00000614240 REPS2Q8NFH8 660 aa21.33■■□□□ 1.01
SMN2-213ENST00000614240 PDLIM7Q9NR12 457 aa21.33■■□□□ 1.01
SMN2-213ENST00000614240 NDUFB10O96000 172 aa21.32■■□□□ 1
SMN2-213ENST00000614240 LRRFIP1Q32MZ4 808 aaKnown RBP21.32■■□□□ 1
SMN2-213ENST00000614240 C1orf53Q5VUE5 145 aa21.32■■□□□ 1
SMN2-213ENST00000614240 SH3RF1Q7Z6J0 888 aa21.32■■□□□ 1
SMN2-213ENST00000614240 DCTPP1Q9H773 170 aa21.32■■□□□ 1
SMN2-213ENST00000614240 TACC3Q9Y6A5 838 aa21.32■■□□□ 1
SMN2-213ENST00000614240 TRIM43BA6NCK2 446 aa21.31■■□□□ 1
SMN2-213ENST00000614240 GPAA1O43292 621 aa21.31■■□□□ 1
SMN2-213ENST00000614240 ZNF865P0CJ78 1059 aaPredicted RBP21.31■■□□□ 1
SMN2-213ENST00000614240 C9orf50Q5SZB4 431 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms