RNA–Protein interactions for RNA: ENST00000607959.5

USF2-216, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 5

Gene USF2, Length 1,920 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-216ENST00000607959 GMCL1P1Q8NEA9 526 aa25.31■■□□□ 1.64
USF2-216ENST00000607959 GLIS2Q9BZE0 524 aaPredicted RBP25.31■■□□□ 1.64
USF2-216ENST00000607959 ZNF112Q9UJU3 913 aa25.31■■□□□ 1.64
USF2-216ENST00000607959 PPP2R3BQ9Y5P8 575 aa25.31■■□□□ 1.64
USF2-216ENST00000607959 F5H6K3 240 aa25.31■■□□□ 1.64
USF2-216ENST00000607959 EPHX2P34913 555 aa25.31■■□□□ 1.64
USF2-216ENST00000607959 KLRC3Q07444 240 aa25.31■■□□□ 1.64
USF2-216ENST00000607959 SLFN13Q68D06 897 aa25.31■■□□□ 1.64
USF2-216ENST00000607959 KCTD1Q719H9 257 aa25.31■■□□□ 1.64
USF2-216ENST00000607959 SCN4AP35499 1836 aa25.31■■□□□ 1.64
USF2-216ENST00000607959 PRPF40AO75400 957 aaKnown RBP25.3■■□□□ 1.64
USF2-216ENST00000607959 NDUFB10O96000 172 aa25.3■■□□□ 1.64
USF2-216ENST00000607959 INPP5BP32019 993 aa25.3■■□□□ 1.64
USF2-216ENST00000607959 PHF20Q9BVI0 1012 aa25.3■■□□□ 1.64
USF2-216ENST00000607959 TFIP11Q9UBB9 837 aaKnown RBP25.3■■□□□ 1.64
USF2-216ENST00000607959 TMX2Q9Y320 296 aa25.3■■□□□ 1.64
USF2-216ENST00000607959 WDR90Q96KV7 1748 aa25.3■■□□□ 1.64
USF2-216ENST00000607959 U2AF2P26368 475 aaKnown RBP eCLIP25.29■■□□□ 1.64
USF2-216ENST00000607959 TYW1BQ6NUM6 668 aa25.29■■□□□ 1.64
USF2-216ENST00000607959 USP48Q86UV5 1035 aa25.29■■□□□ 1.64
USF2-216ENST00000607959 TMEM87AQ8NBN3 555 aa25.29■■□□□ 1.64
USF2-216ENST00000607959 ADM5C9JUS6 153 aa25.29■■□□□ 1.64
USF2-216ENST00000607959 ADAMTS3O15072 1205 aa25.29■■□□□ 1.64
USF2-216ENST00000607959 ASNSP08243 561 aa25.29■■□□□ 1.64
USF2-216ENST00000607959 TRIM29Q14134 588 aa25.29■■□□□ 1.64
USF2-216ENST00000607959 USP50Q70EL3 339 aaPredicted RBP25.29■■□□□ 1.64
USF2-216ENST00000607959 OXER1Q8TDS5 423 aa25.29■■□□□ 1.64
USF2-216ENST00000607959 DCAF4Q8WV16 495 aa25.29■■□□□ 1.64
USF2-216ENST00000607959 GPKOWQ92917 476 aaPredicted RBP eCLIP25.29■■□□□ 1.64
USF2-216ENST00000607959 NUP88Q99567 741 aaPredicted RBP25.29■■□□□ 1.64
USF2-216ENST00000607959 SYNPO2Q9UMS6 1093 aa25.29■■□□□ 1.64
USF2-216ENST00000607959 BTBD18B2RXH4 712 aa25.28■■□□□ 1.64
USF2-216ENST00000607959 CTNND1O60716 968 aaKnown RBP25.28■■□□□ 1.64
USF2-216ENST00000607959 GMCL1Q96IK5 515 aa25.28■■□□□ 1.64
USF2-216ENST00000607959 PIGSQ96S52 555 aa25.28■■□□□ 1.64
USF2-216ENST00000607959 ZNF341Q9BYN7 854 aa25.28■■□□□ 1.64
USF2-216ENST00000607959 FTOQ9C0B1 505 aaKnown RBP eCLIP25.28■■□□□ 1.64
USF2-216ENST00000607959 RBM27Q9P2N5 1060 aaKnown RBP25.28■■□□□ 1.64
USF2-216ENST00000607959 DOCK1Q14185 1865 aa25.28■■□□□ 1.64
USF2-216ENST00000607959 GOLGA6L22H0YM25 854 aa25.27■■□□□ 1.64
USF2-216ENST00000607959 FIBPO43427 364 aa25.27■■□□□ 1.64
USF2-216ENST00000607959 SLC16A2P36021 539 aa25.27■■□□□ 1.64
USF2-216ENST00000607959 CCDC96Q2M329 555 aa25.27■■□□□ 1.64
USF2-216ENST00000607959 GPATCH4Q5T3I0 446 aaKnown RBP25.27■■□□□ 1.64
USF2-216ENST00000607959 WWC2Q6AWC2 1192 aa25.27■■□□□ 1.64
USF2-216ENST00000607959 DIS3L2Q8IYB7 885 aaKnown RBP25.27■■□□□ 1.64
USF2-216ENST00000607959 TAF1DQ9H5J8 278 aaPredicted RBP25.27■■□□□ 1.64
USF2-216ENST00000607959 JMJD4Q9H9V9 463 aa25.27■■□□□ 1.64
USF2-216ENST00000607959 VAT1LQ9HCJ6 419 aa25.27■■□□□ 1.64
USF2-216ENST00000607959 NCLP19338 710 aaKnown RBP25.27■■□□□ 1.64
USF2-216ENST00000607959 DCAF15Q66K64 600 aa25.27■■□□□ 1.64
USF2-216ENST00000607959 ARHGEF10LQ9HCE6 1279 aa25.27■■□□□ 1.64
USF2-216ENST00000607959 GADD45BO75293 160 aaPredicted RBP25.26■■□□□ 1.63
USF2-216ENST00000607959 SLC1A4P43007 532 aa25.26■■□□□ 1.63
USF2-216ENST00000607959 NR5A1Q13285 461 aa25.26■■□□□ 1.63
USF2-216ENST00000607959 BRAPQ7Z569 592 aa25.26■■□□□ 1.63
USF2-216ENST00000607959 ADGRF4Q8IZF3 695 aa25.26■■□□□ 1.63
USF2-216ENST00000607959 DCPSQ96C86 337 aaKnown RBP25.26■■□□□ 1.63
USF2-216ENST00000607959 RAD21O60216 631 aa25.25■■□□□ 1.63
USF2-216ENST00000607959 KRT85P78386 507 aa25.25■■□□□ 1.63
USF2-216ENST00000607959 MYSM1Q5VVJ2 828 aa25.25■■□□□ 1.63
USF2-216ENST00000607959 ZKSCAN4Q969J2 545 aaPredicted RBP25.25■■□□□ 1.63
USF2-216ENST00000607959 MTMR8Q96EF0 704 aa25.25■■□□□ 1.63
USF2-216ENST00000607959 USP28Q96RU2 1077 aa25.25■■□□□ 1.63
USF2-216ENST00000607959 STXBP3O00186 592 aa25.25■■□□□ 1.63
USF2-216ENST00000607959 TRAK2O60296 914 aa25.25■■□□□ 1.63
USF2-216ENST00000607959 HOMER1Q86YM7 354 aa25.25■■□□□ 1.63
USF2-216ENST00000607959 SPICE1Q8N0Z3 855 aa25.25■■□□□ 1.63
USF2-216ENST00000607959 KLRG1Q96E93 195 aa25.25■■□□□ 1.63
USF2-216ENST00000607959 PAPPA2Q9BXP8 1791 aa25.24■■□□□ 1.63
USF2-216ENST00000607959 ZC3H15Q8WU90 426 aaKnown RBP25.24■■□□□ 1.63
USF2-216ENST00000607959 HOOK2Q96ED9 719 aa25.24■■□□□ 1.63
USF2-216ENST00000607959 RRP36Q96EU6 259 aaKnown RBP25.24■■□□□ 1.63
USF2-216ENST00000607959 WRNIP1Q96S55 665 aa25.24■■□□□ 1.63
USF2-216ENST00000607959 GINM1Q9NU53 330 aa25.24■■□□□ 1.63
USF2-216ENST00000607959 BARHL2Q9NY43 387 aa25.24■■□□□ 1.63
USF2-216ENST00000607959 USP17L10C9JJH3 530 aa25.24■■□□□ 1.63
USF2-216ENST00000607959 KRT26Q7Z3Y9 468 aa25.24■■□□□ 1.63
USF2-216ENST00000607959 TNFRSF25Q93038 417 aa25.24■■□□□ 1.63
USF2-216ENST00000607959 FOXP1Q9H334 677 aaPredicted RBP25.24■■□□□ 1.63
USF2-216ENST00000607959 SH3GLB2Q9NR46 395 aa25.24■■□□□ 1.63
USF2-216ENST00000607959 PPP1R11O60927 126 aaPredicted RBP25.23■■□□□ 1.63
USF2-216ENST00000607959 USP2O75604 605 aaPredicted RBP25.23■■□□□ 1.63
USF2-216ENST00000607959 XBP1P17861 261 aa25.23■■□□□ 1.63
USF2-216ENST00000607959 EARS2Q5JPH6 523 aaKnown RBP25.23■■□□□ 1.63
USF2-216ENST00000607959 NOSTRINQ8IVI9 506 aa25.23■■□□□ 1.63
USF2-216ENST00000607959 SULF1Q8IWU6 871 aa25.23■■□□□ 1.63
USF2-216ENST00000607959 GPT2Q8TD30 523 aa25.23■■□□□ 1.63
USF2-216ENST00000607959 LEO1Q8WVC0 666 aaPredicted RBP25.23■■□□□ 1.63
USF2-216ENST00000607959 VCPKMTQ9H867 229 aa25.23■■□□□ 1.63
USF2-216ENST00000607959 PHIPQ8WWQ0 1821 aa25.23■■□□□ 1.63
USF2-216ENST00000607959 BMP3P12645 472 aa25.22■■□□□ 1.63
USF2-216ENST00000607959 SUPT20HL1Q3ZLR7 823 aa25.22■■□□□ 1.63
USF2-216ENST00000607959 NOM1Q5C9Z4 860 aaKnown RBP25.22■■□□□ 1.63
USF2-216ENST00000607959 HEATR3Q7Z4Q2 680 aa25.22■■□□□ 1.63
USF2-216ENST00000607959 SCYL3Q8IZE3 742 aa25.22■■□□□ 1.63
USF2-216ENST00000607959 FAM205CA6NFA0 338 aa25.22■■□□□ 1.63
USF2-216ENST00000607959 ZYXQ15942 572 aaKnown RBP25.22■■□□□ 1.63
USF2-216ENST00000607959 POTEIP0CG38 1075 aa25.21■■□□□ 1.63
USF2-216ENST00000607959 POTEJP0CG39 1038 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms