RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 TMEM179Q6ZVK1 233 aa21■□□□□ 0.95
RETREG3-210ENST00000590541 CLEC10AQ8IUN9 316 aa21■□□□□ 0.95
RETREG3-210ENST00000590541 SPICE1Q8N0Z3 855 aa21■□□□□ 0.95
RETREG3-210ENST00000590541 SLC44A5Q8NCS7 719 aa21■□□□□ 0.95
RETREG3-210ENST00000590541 TINF2Q9BSI4 451 aa21■□□□□ 0.95
RETREG3-210ENST00000590541 ZNF576Q9H609 170 aa21■□□□□ 0.95
RETREG3-210ENST00000590541 TMEM39AQ9NV64 488 aa21■□□□□ 0.95
RETREG3-210ENST00000590541 ZNFX1Q9P2E3 1918 aaKnown RBP21■□□□□ 0.95
RETREG3-210ENST00000590541 PARP14Q460N5 1801 aa20.99■□□□□ 0.95
RETREG3-210ENST00000590541 ADAMTS4O75173 837 aa20.99■□□□□ 0.95
RETREG3-210ENST00000590541 SLC25A27O95847 323 aa20.99■□□□□ 0.95
RETREG3-210ENST00000590541 PGK2P07205 417 aa20.99■□□□□ 0.95
RETREG3-210ENST00000590541 ZNF865P0CJ78 1059 aaPredicted RBP20.99■□□□□ 0.95
RETREG3-210ENST00000590541 ZNF792Q3KQV3 632 aa20.99■□□□□ 0.95
RETREG3-210ENST00000590541 ANKRD33Q7Z3H0 272 aa20.99■□□□□ 0.95
RETREG3-210ENST00000590541 FTSJ3Q8IY81 847 aaKnown RBP20.99■□□□□ 0.95
RETREG3-210ENST00000590541 LENG1Q96BZ8 264 aaPredicted RBP20.99■□□□□ 0.95
RETREG3-210ENST00000590541 VCPKMTQ9H867 229 aa20.99■□□□□ 0.95
RETREG3-210ENST00000590541 TMX2Q9Y320 296 aa20.99■□□□□ 0.95
RETREG3-210ENST00000590541 CYP2D6P10635 497 aa20.98■□□□□ 0.95
RETREG3-210ENST00000590541 SAMD1Q6SPF0 538 aaPredicted RBP20.98■□□□□ 0.95
RETREG3-210ENST00000590541 SDR42E1Q8WUS8 393 aa20.98■□□□□ 0.95
RETREG3-210ENST00000590541 TOX2Q96NM4 488 aa20.98■□□□□ 0.95
RETREG3-210ENST00000590541 MMP19Q99542 508 aa20.98■□□□□ 0.95
RETREG3-210ENST00000590541 CRNKL1Q9BZJ0 848 aaKnown RBP20.98■□□□□ 0.95
RETREG3-210ENST00000590541 DCP1AQ9NPI6 582 aaPredicted RBP20.98■□□□□ 0.95
RETREG3-210ENST00000590541 ADAMTS5Q9UNA0 930 aa20.98■□□□□ 0.95
RETREG3-210ENST00000590541 DIS3Q9Y2L1 958 aaKnown RBP20.98■□□□□ 0.95
RETREG3-210ENST00000590541 AKR1A1P14550 325 aa20.97■□□□□ 0.95
RETREG3-210ENST00000590541 TIFAQ96CG3 184 aa20.97■□□□□ 0.95
RETREG3-210ENST00000590541 DYNLL2Q96FJ2 89 aa20.97■□□□□ 0.95
RETREG3-210ENST00000590541 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.97■□□□□ 0.95
RETREG3-210ENST00000590541 ARHGEF10LQ9HCE6 1279 aa20.97■□□□□ 0.95
RETREG3-210ENST00000590541 COL11A1P12107 1806 aaPredicted RBP20.97■□□□□ 0.95
RETREG3-210ENST00000590541 WDR46O15213 610 aaKnown RBP20.96■□□□□ 0.95
RETREG3-210ENST00000590541 AKR1B1P15121 316 aa20.96■□□□□ 0.95
RETREG3-210ENST00000590541 PDE6AP16499 860 aa20.96■□□□□ 0.95
RETREG3-210ENST00000590541 ICA1Q05084 483 aa20.96■□□□□ 0.95
RETREG3-210ENST00000590541 RIOX2Q8IUF8 465 aa20.96■□□□□ 0.95
RETREG3-210ENST00000590541 TSEN34Q9BSV6 310 aaKnown RBP20.96■□□□□ 0.95
RETREG3-210ENST00000590541 STARD7Q9NQZ5 370 aa20.96■□□□□ 0.95
RETREG3-210ENST00000590541 SWAP70Q9UH65 585 aa20.96■□□□□ 0.95
RETREG3-210ENST00000590541 PLXNA1Q9UIW2 1896 aa20.95■□□□□ 0.94
RETREG3-210ENST00000590541 DCDC2CA8MYV0 355 aa20.95■□□□□ 0.94
RETREG3-210ENST00000590541 TIMP1P01033 207 aa20.95■□□□□ 0.94
RETREG3-210ENST00000590541 MS4A1P11836 297 aa20.95■□□□□ 0.94
RETREG3-210ENST00000590541 ACLYP53396 1101 aa20.95■□□□□ 0.94
RETREG3-210ENST00000590541 KCTD2Q14681 263 aa20.95■□□□□ 0.94
RETREG3-210ENST00000590541 SLC9C2Q5TAH2 1124 aa20.95■□□□□ 0.94
RETREG3-210ENST00000590541 C16orf59Q7L2K0 433 aa20.95■□□□□ 0.94
RETREG3-210ENST00000590541 LCORLQ8N3X6 602 aa20.95■□□□□ 0.94
RETREG3-210ENST00000590541 SH2D4AQ9H788 454 aa20.95■□□□□ 0.94
RETREG3-210ENST00000590541 FBXO28Q9NVF7 368 aa20.95■□□□□ 0.94
RETREG3-210ENST00000590541 RAPGEFL1Q9UHV5 662 aa20.95■□□□□ 0.94
RETREG3-210ENST00000590541 TBX21Q9UL17 535 aa20.95■□□□□ 0.94
RETREG3-210ENST00000590541 PBX2P40425 430 aa20.94■□□□□ 0.94
RETREG3-210ENST00000590541 CCSAPQ6IQ19 270 aaPredicted RBP20.94■□□□□ 0.94
RETREG3-210ENST00000590541 AACSQ86V21 672 aa20.94■□□□□ 0.94
RETREG3-210ENST00000590541 KLHDC9Q8NEP7 349 aa20.94■□□□□ 0.94
RETREG3-210ENST00000590541 PBX4Q9BYU1 374 aa20.94■□□□□ 0.94
RETREG3-210ENST00000590541 ZNF532Q9HCE3 1301 aa20.94■□□□□ 0.94
RETREG3-210ENST00000590541 SYNRGQ9UMZ2 1314 aa20.94■□□□□ 0.94
RETREG3-210ENST00000590541 TCRBV5S4A2TA0A5A2 114 aa20.93■□□□□ 0.94
RETREG3-210ENST00000590541 GRXCR1A8MXD5 290 aa20.93■□□□□ 0.94
RETREG3-210ENST00000590541 SMIM22K7EJ46 135 aa20.93■□□□□ 0.94
RETREG3-210ENST00000590541 STAT3P40763 770 aa20.93■□□□□ 0.94
RETREG3-210ENST00000590541 TTF1Q15361 905 aaPredicted RBP20.93■□□□□ 0.94
RETREG3-210ENST00000590541 RASIP1Q5U651 963 aa20.93■□□□□ 0.94
RETREG3-210ENST00000590541 MFSD5Q6N075 450 aa20.93■□□□□ 0.94
RETREG3-210ENST00000590541 REPS2Q8NFH8 660 aa20.93■□□□□ 0.94
RETREG3-210ENST00000590541 NUP133Q8WUM0 1156 aa20.93■□□□□ 0.94
RETREG3-210ENST00000590541 ATXN2LQ8WWM7 1075 aaKnown RBP20.93■□□□□ 0.94
RETREG3-210ENST00000590541 PPM1EQ8WY54 764 aa20.93■□□□□ 0.94
RETREG3-210ENST00000590541 ZNF214Q9UL59 606 aaPredicted RBP20.93■□□□□ 0.94
RETREG3-210ENST00000590541 MOXD2PA6NHM9 499 aa20.92■□□□□ 0.94
RETREG3-210ENST00000590541 VWA5AO00534 786 aa20.92■□□□□ 0.94
RETREG3-210ENST00000590541 KCNA10Q16322 511 aa20.92■□□□□ 0.94
RETREG3-210ENST00000590541 TMEM240Q5SV17 173 aa20.92■□□□□ 0.94
RETREG3-210ENST00000590541 ITPRIPQ8IWB1 547 aa20.92■□□□□ 0.94
RETREG3-210ENST00000590541 GAS2L1Q99501 681 aaPredicted RBP20.92■□□□□ 0.94
RETREG3-210ENST00000590541 PRDM12Q9H4Q4 367 aa20.92■□□□□ 0.94
RETREG3-210ENST00000590541 CNPY2Q9Y2B0 182 aa20.92■□□□□ 0.94
RETREG3-210ENST00000590541 MYADML2A6NDP7 307 aa20.91■□□□□ 0.94
RETREG3-210ENST00000590541 SNAI1O95863 264 aaPredicted RBP20.91■□□□□ 0.94
RETREG3-210ENST00000590541 MYH8P13535 1937 aa20.91■□□□□ 0.94
RETREG3-210ENST00000590541 EEF2P13639 858 aaKnown RBP20.91■□□□□ 0.94
RETREG3-210ENST00000590541 IRX5P78411 483 aaPredicted RBP20.91■□□□□ 0.94
RETREG3-210ENST00000590541 AKNAD1Q5T1N1 836 aa20.91■□□□□ 0.94
RETREG3-210ENST00000590541 ASB2Q96Q27 587 aa20.91■□□□□ 0.94
RETREG3-210ENST00000590541 ARMT1Q9H993 441 aa20.91■□□□□ 0.94
RETREG3-210ENST00000590541 PPP1R9AQ9ULJ8 1098 aa20.91■□□□□ 0.94
RETREG3-210ENST00000590541 EXOC6BQ9Y2D4 811 aa20.91■□□□□ 0.94
RETREG3-210ENST00000590541 PRKAB2O43741 272 aa20.9■□□□□ 0.94
RETREG3-210ENST00000590541 CDK7P50613 346 aa20.9■□□□□ 0.94
RETREG3-210ENST00000590541 PPIGQ13427 754 aaKnown RBP eCLIP20.9■□□□□ 0.94
RETREG3-210ENST00000590541 CCDC17Q96LX7 622 aa20.9■□□□□ 0.94
RETREG3-210ENST00000590541 THEGQ9P2T0 379 aa20.9■□□□□ 0.94
RETREG3-210ENST00000590541 FAM184BQ9ULE4 1060 aa20.9■□□□□ 0.94
RETREG3-210ENST00000590541 ELP1O95163 1332 aa20.89■□□□□ 0.93
RETREG3-210ENST00000590541 SYNGAP1Q96PV0 1343 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms