RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 SYAP1Q96A49 352 aaPredicted RBP10.92□□□□□ -0.66
VPS25-205ENST00000590339 HOOK2Q96ED9 719 aa10.92□□□□□ -0.66
VPS25-205ENST00000590339 CCDC196A0A1B0GTZ2 297 aa10.91□□□□□ -0.66
VPS25-205ENST00000590339 ALDH1A1P00352 501 aa10.91□□□□□ -0.66
VPS25-205ENST00000590339 INPP5BP32019 993 aa10.91□□□□□ -0.66
VPS25-205ENST00000590339 FUT2Q10981 343 aa10.91□□□□□ -0.66
VPS25-205ENST00000590339 TROAPQ12815 778 aa10.91□□□□□ -0.66
VPS25-205ENST00000590339 IFIT1BQ5T764 474 aaKnown RBP10.91□□□□□ -0.66
VPS25-205ENST00000590339 OTUD7BQ6GQQ9 843 aa10.91□□□□□ -0.66
VPS25-205ENST00000590339 RCSD1Q6JBY9 416 aa10.91□□□□□ -0.66
VPS25-205ENST00000590339 C16orf86Q6ZW13 317 aa10.91□□□□□ -0.66
VPS25-205ENST00000590339 BRAPQ7Z569 592 aa10.91□□□□□ -0.66
VPS25-205ENST00000590339 MAPKAPK5Q8IW41 473 aa10.91□□□□□ -0.66
VPS25-205ENST00000590339 AMOTL1Q8IY63 956 aa10.91□□□□□ -0.66
VPS25-205ENST00000590339 PTPN18Q99952 460 aa10.91□□□□□ -0.66
VPS25-205ENST00000590339 ALG1Q9BT22 464 aa10.91□□□□□ -0.66
VPS25-205ENST00000590339 ZNF341Q9BYN7 854 aa10.91□□□□□ -0.66
VPS25-205ENST00000590339 TCP11L1Q9NUJ3 509 aa10.91□□□□□ -0.66
VPS25-205ENST00000590339 CNTNAP5Q8WYK1 1306 aa10.9□□□□□ -0.66
VPS25-205ENST00000590339 COL2A1P02458 1487 aaPredicted RBP10.9□□□□□ -0.66
VPS25-205ENST00000590339 CCL15-CCL14A0A0B4J2E2 113 aa10.9□□□□□ -0.66
VPS25-205ENST00000590339 KIF28PB7ZC32 967 aa10.9□□□□□ -0.66
VPS25-205ENST00000590339 FKTNO75072 461 aa10.9□□□□□ -0.66
VPS25-205ENST00000590339 PPFIA3O75145 1194 aa10.9□□□□□ -0.66
VPS25-205ENST00000590339 CALM1P0DP23 149 aa10.9□□□□□ -0.66
VPS25-205ENST00000590339 CALM2P0DP24 149 aa10.9□□□□□ -0.66
VPS25-205ENST00000590339 CALM3P0DP25 149 aa10.9□□□□□ -0.66
VPS25-205ENST00000590339 SLURP2P0DP57 97 aa10.9□□□□□ -0.66
VPS25-205ENST00000590339 RASA1P20936 1047 aa10.9□□□□□ -0.66
VPS25-205ENST00000590339 MRE11P49959 708 aa10.9□□□□□ -0.66
VPS25-205ENST00000590339 GUCY1B3Q02153 619 aa10.9□□□□□ -0.66
VPS25-205ENST00000590339 CCL15Q16663 113 aa10.9□□□□□ -0.66
VPS25-205ENST00000590339 CCDC178Q5BJE1 867 aa10.9□□□□□ -0.66
VPS25-205ENST00000590339 CCDC183Q5T5S1 534 aa10.9□□□□□ -0.66
VPS25-205ENST00000590339 KRT40Q6A162 431 aa10.9□□□□□ -0.66
VPS25-205ENST00000590339 CTU1Q7Z7A3 348 aaKnown RBP10.9□□□□□ -0.66
VPS25-205ENST00000590339 CCDC144CPQ8IYA2 1237 aa10.9□□□□□ -0.66
VPS25-205ENST00000590339 FANCBQ8NB91 859 aa10.9□□□□□ -0.66
VPS25-205ENST00000590339 WASF1Q92558 559 aa10.9□□□□□ -0.66
VPS25-205ENST00000590339 PHKBQ93100 1093 aa10.9□□□□□ -0.66
VPS25-205ENST00000590339 DYNLL2Q96FJ2 89 aa10.9□□□□□ -0.66
VPS25-205ENST00000590339 MS4A4AQ96JQ5 239 aa10.9□□□□□ -0.66
VPS25-205ENST00000590339 SPATA32Q96LK8 384 aa10.9□□□□□ -0.66
VPS25-205ENST00000590339 ZNF396Q96N95 335 aaPredicted RBP10.9□□□□□ -0.66
VPS25-205ENST00000590339 AIFM3Q96NN9 605 aa10.9□□□□□ -0.66
VPS25-205ENST00000590339 RNF26Q9BY78 433 aaPredicted RBP10.9□□□□□ -0.66
VPS25-205ENST00000590339 RBM28Q9NW13 759 aaKnown RBP10.9□□□□□ -0.66
VPS25-205ENST00000590339 CFAP45Q9UL16 551 aa10.9□□□□□ -0.66
VPS25-205ENST00000590339 SNCAIPQ9Y6H5 919 aa10.9□□□□□ -0.66
VPS25-205ENST00000590339 DDTLA6NHG4 134 aaPredicted RBP10.89□□□□□ -0.67
VPS25-205ENST00000590339 SPDYE5A6NIY4 337 aa10.89□□□□□ -0.67
VPS25-205ENST00000590339 IRF6O14896 467 aa10.89□□□□□ -0.67
VPS25-205ENST00000590339 ENTPD3O75355 529 aa10.89□□□□□ -0.67
VPS25-205ENST00000590339 WDHD1O75717 1129 aaPredicted RBP10.89□□□□□ -0.67
VPS25-205ENST00000590339 DEXIO95424 95 aa10.89□□□□□ -0.67
VPS25-205ENST00000590339 NOVP48745 357 aa10.89□□□□□ -0.67
VPS25-205ENST00000590339 PLCD1P51178 756 aa10.89□□□□□ -0.67
VPS25-205ENST00000590339 GTF2A2P52657 109 aa10.89□□□□□ -0.67
VPS25-205ENST00000590339 GABPAQ06546 454 aa10.89□□□□□ -0.67
VPS25-205ENST00000590339 SSRP1Q08945 709 aaKnown RBP10.89□□□□□ -0.67
VPS25-205ENST00000590339 FAM47AQ5JRC9 791 aa10.89□□□□□ -0.67
VPS25-205ENST00000590339 MYSM1Q5VVJ2 828 aa10.89□□□□□ -0.67
VPS25-205ENST00000590339 LRSAM1Q6UWE0 723 aa10.89□□□□□ -0.67
VPS25-205ENST00000590339 TMTC3Q6ZXV5 915 aa10.89□□□□□ -0.67
VPS25-205ENST00000590339 SH3BP5LQ7L8J4 393 aa10.89□□□□□ -0.67
VPS25-205ENST00000590339 CATIPQ7Z7H3 387 aa10.89□□□□□ -0.67
VPS25-205ENST00000590339 DGKHQ86XP1 1220 aa10.89□□□□□ -0.67
VPS25-205ENST00000590339 ERO1BQ86YB8 467 aa10.89□□□□□ -0.67
VPS25-205ENST00000590339 CRACR2BQ8N4Y2 399 aaPredicted RBP10.89□□□□□ -0.67
VPS25-205ENST00000590339 BRI3BPQ8WY22 251 aa10.89□□□□□ -0.67
VPS25-205ENST00000590339 PGBD1Q96JS3 809 aa10.89□□□□□ -0.67
VPS25-205ENST00000590339 USP28Q96RU2 1077 aa10.89□□□□□ -0.67
VPS25-205ENST00000590339 MAP3K14Q99558 947 aa10.89□□□□□ -0.67
VPS25-205ENST00000590339 IDI2Q9BXS1 227 aa10.89□□□□□ -0.67
VPS25-205ENST00000590339 SLC26A6Q9BXS9 759 aa10.89□□□□□ -0.67
VPS25-205ENST00000590339 GRPEL1Q9HAV7 217 aa10.89□□□□□ -0.67
VPS25-205ENST00000590339 DDX4Q9NQI0 724 aaKnown RBP10.89□□□□□ -0.67
VPS25-205ENST00000590339 IL17RBQ9NRM6 502 aa10.89□□□□□ -0.67
VPS25-205ENST00000590339 SAP30BPQ9UHR5 308 aaKnown RBP10.89□□□□□ -0.67
VPS25-205ENST00000590339 RCOR1Q9UKL0 485 aa10.89□□□□□ -0.67
VPS25-205ENST00000590339 TESPA1A2RU30 521 aaPredicted RBP10.88□□□□□ -0.67
VPS25-205ENST00000590339 TSPY2A6NKD2 308 aa10.88□□□□□ -0.67
VPS25-205ENST00000590339 NMT2O60551 498 aa10.88□□□□□ -0.67
VPS25-205ENST00000590339 ECM2O94769 699 aaPredicted RBP10.88□□□□□ -0.67
VPS25-205ENST00000590339 POLR3DP05423 398 aaPredicted RBP10.88□□□□□ -0.67
VPS25-205ENST00000590339 U2AF2P26368 475 aaKnown RBP eCLIP10.88□□□□□ -0.674e-8■□□□□ 9.6
VPS25-205ENST00000590339 NASPP49321 788 aaPredicted RBP10.88□□□□□ -0.67
VPS25-205ENST00000590339 CDK8P49336 464 aa10.88□□□□□ -0.67
VPS25-205ENST00000590339 CRHR2Q13324 411 aa10.88□□□□□ -0.67
VPS25-205ENST00000590339 TRIM22Q8IYM9 498 aa10.88□□□□□ -0.67
VPS25-205ENST00000590339 FAM43AQ8N2R8 423 aa10.88□□□□□ -0.67
VPS25-205ENST00000590339 SLC44A5Q8NCS7 719 aa10.88□□□□□ -0.67
VPS25-205ENST00000590339 ZNF287Q9HBT7 754 aa10.88□□□□□ -0.67
VPS25-205ENST00000590339 GJB4Q9NTQ9 266 aa10.88□□□□□ -0.67
VPS25-205ENST00000590339 POLR3EQ9NVU0 708 aa10.88□□□□□ -0.67
VPS25-205ENST00000590339 RTEL1Q9NZ71 1219 aa10.88□□□□□ -0.67
VPS25-205ENST00000590339 TFIP11Q9UBB9 837 aaKnown RBP10.88□□□□□ -0.67
VPS25-205ENST00000590339 CASP8AP2Q9UKL3 1982 aa10.87□□□□□ -0.67
VPS25-205ENST00000590339 SYCE3A1L190 88 aa10.87□□□□□ -0.67
VPS25-205ENST00000590339 FAM196BA6NMK8 535 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms