RNA–Protein interactions for RNA: ENST00000581273.5

TVP23C-208, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 3

Gene TVP23C, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-208ENST00000581273 MICALCLQ6ZW33 695 aa8.5□□□□□ -1.05
TVP23C-208ENST00000581273 TICAM2Q86XR7 235 aa8.5□□□□□ -1.05
TVP23C-208ENST00000581273 SULF1Q8IWU6 871 aa8.5□□□□□ -1.05
TVP23C-208ENST00000581273 REXO1L1PQ8IX06 675 aa8.5□□□□□ -1.05
TVP23C-208ENST00000581273 DHX40Q8IX18 779 aaKnown RBP8.5□□□□□ -1.05
TVP23C-208ENST00000581273 DDX60Q8IY21 1712 aaKnown RBP8.5□□□□□ -1.05
TVP23C-208ENST00000581273 SSH3Q8TE77 659 aa8.5□□□□□ -1.05
TVP23C-208ENST00000581273 DPF2Q92785 391 aa8.5□□□□□ -1.05
TVP23C-208ENST00000581273 FAM89AQ96GI7 184 aa8.5□□□□□ -1.05
TVP23C-208ENST00000581273 PARD6BQ9BYG5 372 aa8.5□□□□□ -1.05
TVP23C-208ENST00000581273 VPS18Q9P253 973 aa8.5□□□□□ -1.05
TVP23C-208ENST00000581273 RAB21Q9UL25 225 aa8.5□□□□□ -1.05
TVP23C-208ENST00000581273 EXOC6BQ9Y2D4 811 aa8.5□□□□□ -1.05
TVP23C-208ENST00000581273 CHMP3Q9Y3E7 222 aa8.5□□□□□ -1.05
TVP23C-208ENST00000581273 MRFAP1Q9Y605 127 aa8.5□□□□□ -1.05
TVP23C-208ENST00000581273 ASTN2O75129 1339 aaPredicted RBP8.5□□□□□ -1.05
TVP23C-208ENST00000581273 DUOX1Q9NRD9 1551 aa8.49□□□□□ -1.05
TVP23C-208ENST00000581273 ATP5J2-PTCD1G3V325 749 aa8.49□□□□□ -1.05
TVP23C-208ENST00000581273 TNFRSF10AO00220 468 aa8.49□□□□□ -1.05
TVP23C-208ENST00000581273 STX10O60499 249 aa8.49□□□□□ -1.05
TVP23C-208ENST00000581273 ERLIN2O94905 339 aa8.49□□□□□ -1.05
TVP23C-208ENST00000581273 UBTFL1P0CB47 393 aaPredicted RBP8.49□□□□□ -1.05
TVP23C-208ENST00000581273 NLRP12P59046 1061 aa8.49□□□□□ -1.05
TVP23C-208ENST00000581273 RESTQ13127 1097 aa8.49□□□□□ -1.05
TVP23C-208ENST00000581273 ME3Q16798 604 aa8.49□□□□□ -1.05
TVP23C-208ENST00000581273 KIF4BQ2VIQ3 1234 aa8.49□□□□□ -1.05
TVP23C-208ENST00000581273 B4GALNT4Q76KP1 1039 aa8.49□□□□□ -1.05
TVP23C-208ENST00000581273 LRP10Q7Z4F1 713 aa8.49□□□□□ -1.05
TVP23C-208ENST00000581273 SRGAP1Q7Z6B7 1085 aa8.49□□□□□ -1.05
TVP23C-208ENST00000581273 CERS3Q8IU89 383 aa8.49□□□□□ -1.05
TVP23C-208ENST00000581273 CCDC50Q8IVM0 306 aa8.49□□□□□ -1.05
TVP23C-208ENST00000581273 AOPEPQ8N6M6 819 aa8.49□□□□□ -1.05
TVP23C-208ENST00000581273 GPATCH11Q8N954 259 aa8.49□□□□□ -1.05
TVP23C-208ENST00000581273 MSANTD4Q8NCY6 345 aa8.49□□□□□ -1.05
TVP23C-208ENST00000581273 GIMAP7Q8NHV1 300 aa8.49□□□□□ -1.05
TVP23C-208ENST00000581273 MRPS27Q92552 414 aaKnown RBP8.49□□□□□ -1.05
TVP23C-208ENST00000581273 CELF1Q92879 486 aaKnown RBP8.49□□□□□ -1.05
TVP23C-208ENST00000581273 ZNF333Q96JL9 665 aa8.49□□□□□ -1.05
TVP23C-208ENST00000581273 SDF4Q9BRK5 362 aa8.49□□□□□ -1.05
TVP23C-208ENST00000581273 NAA15Q9BXJ9 866 aaKnown RBP8.49□□□□□ -1.05
TVP23C-208ENST00000581273 SNRKQ9NRH2 765 aa8.49□□□□□ -1.05
TVP23C-208ENST00000581273 GGA3Q9NZ52 723 aa8.49□□□□□ -1.05
TVP23C-208ENST00000581273 RAI14Q9P0K7 980 aa8.49□□□□□ -1.05
TVP23C-208ENST00000581273 POLLQ9UGP5 575 aa8.49□□□□□ -1.05
TVP23C-208ENST00000581273 HOOK1Q9UJC3 728 aaKnown RBP8.49□□□□□ -1.05
TVP23C-208ENST00000581273 SCAF8Q9UPN6 1271 aaKnown RBP8.49□□□□□ -1.05
TVP23C-208ENST00000581273 RPTORQ8N122 1335 aa8.49□□□□□ -1.05
TVP23C-208ENST00000581273 EBAG9O00559 213 aa8.48□□□□□ -1.05
TVP23C-208ENST00000581273 TOP1P11387 765 aaKnown RBP8.48□□□□□ -1.05
TVP23C-208ENST00000581273 RPS6KB1P23443 525 aa8.48□□□□□ -1.05
TVP23C-208ENST00000581273 RPS12P25398 132 aaKnown RBP8.48□□□□□ -1.05
TVP23C-208ENST00000581273 CHMP4BP1P59074 171 aa8.48□□□□□ -1.05
TVP23C-208ENST00000581273 GNG11P61952 73 aa8.48□□□□□ -1.05
TVP23C-208ENST00000581273 NECTIN1Q15223 517 aa8.48□□□□□ -1.05
TVP23C-208ENST00000581273 WHAMMP3Q1A5X7 153 aa8.48□□□□□ -1.05
TVP23C-208ENST00000581273 KRT24Q2M2I5 525 aa8.48□□□□□ -1.05
TVP23C-208ENST00000581273 TRIM65Q6PJ69 517 aa8.48□□□□□ -1.05
TVP23C-208ENST00000581273 SLC4A10Q6U841 1118 aa8.48□□□□□ -1.05
TVP23C-208ENST00000581273 C11orf57Q6ZUT1 292 aaPredicted RBP8.48□□□□□ -1.05
TVP23C-208ENST00000581273 TMC4Q7Z404 712 aa8.48□□□□□ -1.05
TVP23C-208ENST00000581273 ALYREFQ86V81 257 aaKnown RBP8.48□□□□□ -1.05
TVP23C-208ENST00000581273 PACS2Q86VP3 889 aa8.48□□□□□ -1.05
TVP23C-208ENST00000581273 FMNL3Q8IVF7 1028 aa8.48□□□□□ -1.05
TVP23C-208ENST00000581273 CLASRPQ8N2M8 674 aaKnown RBP8.48□□□□□ -1.05
TVP23C-208ENST00000581273 RHPN1Q8TCX5 695 aa8.48□□□□□ -1.05
TVP23C-208ENST00000581273 KCNG4Q8TDN1 519 aa8.48□□□□□ -1.05
TVP23C-208ENST00000581273 AFAP1L1Q8TED9 768 aa8.48□□□□□ -1.05
TVP23C-208ENST00000581273 CDCA5Q96FF9 252 aa8.48□□□□□ -1.05
TVP23C-208ENST00000581273 EYA3Q99504 573 aa8.48□□□□□ -1.05
TVP23C-208ENST00000581273 ZC3H12CQ9C0D7 883 aaKnown RBP8.48□□□□□ -1.05
TVP23C-208ENST00000581273 TMX1Q9H3N1 280 aa8.48□□□□□ -1.05
TVP23C-208ENST00000581273 IFNKQ9P0W0 207 aa8.48□□□□□ -1.05
TVP23C-208ENST00000581273 CHPF2Q9P2E5 772 aa8.48□□□□□ -1.05
TVP23C-208ENST00000581273 MYO1AQ9UBC5 1043 aa8.48□□□□□ -1.05
TVP23C-208ENST00000581273 DACH1Q9UI36 760 aa8.48□□□□□ -1.05
TVP23C-208ENST00000581273 LRRC37AA6NMS7 1700 aa8.48□□□□□ -1.05
TVP23C-208ENST00000581273 SYNGAP1Q96PV0 1343 aa8.48□□□□□ -1.05
TVP23C-208ENST00000581273 RTL9Q8NET4 1388 aa8.48□□□□□ -1.05
TVP23C-208ENST00000581273 COL4A1P02462 1669 aa8.47□□□□□ -1.05
TVP23C-208ENST00000581273 KIF5CO60282 957 aa8.47□□□□□ -1.05
TVP23C-208ENST00000581273 UFL1O94874 794 aa8.47□□□□□ -1.05
TVP23C-208ENST00000581273 ARHGAP25P42331 645 aa8.47□□□□□ -1.05
TVP23C-208ENST00000581273 MNAT1P51948 309 aa8.47□□□□□ -1.05
TVP23C-208ENST00000581273 SCARF1Q14162 830 aa8.47□□□□□ -1.05
TVP23C-208ENST00000581273 TTLL12Q14166 644 aaPredicted RBP8.47□□□□□ -1.05
TVP23C-208ENST00000581273 ANGEL2Q5VTE6 544 aaKnown RBP8.47□□□□□ -1.05
TVP23C-208ENST00000581273 CREB3L3Q68CJ9 461 aa8.47□□□□□ -1.05
TVP23C-208ENST00000581273 ADALQ6DHV7 355 aa8.47□□□□□ -1.05
TVP23C-208ENST00000581273 CCDC70Q6NSX1 233 aa8.47□□□□□ -1.05
TVP23C-208ENST00000581273 ARMCX5Q6P1M9 558 aa8.47□□□□□ -1.05
TVP23C-208ENST00000581273 MOB2Q70IA6 237 aa8.47□□□□□ -1.05
TVP23C-208ENST00000581273 MICALL1Q8N3F8 863 aa8.47□□□□□ -1.05
TVP23C-208ENST00000581273 FSIP1Q8NA03 581 aa8.47□□□□□ -1.05
TVP23C-208ENST00000581273 TBC1D16Q8TBP0 767 aa8.47□□□□□ -1.05
TVP23C-208ENST00000581273 PI4K2BQ8TCG2 481 aa8.47□□□□□ -1.05
TVP23C-208ENST00000581273 RUBCNQ92622 972 aa8.47□□□□□ -1.05
TVP23C-208ENST00000581273 CCDC34Q96HJ3 373 aa8.47□□□□□ -1.05
TVP23C-208ENST00000581273 PGBD1Q96JS3 809 aa8.47□□□□□ -1.05
TVP23C-208ENST00000581273 RPGRIP1Q96KN7 1286 aa8.47□□□□□ -1.05
TVP23C-208ENST00000581273 GUCD1Q96NT3 240 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms