RNA–Protein interactions for RNA: ENST00000562078.5

CLK3-206, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-206ENST00000562078 CHUKO15111 745 aa14.99□□□□□ -0.01
CLK3-206ENST00000562078 CHRNDQ07001 517 aa14.99□□□□□ -0.01
CLK3-206ENST00000562078 SMARCC2Q8TAQ2 1214 aa14.99□□□□□ -0.01
CLK3-206ENST00000562078 LLPHQ9BRT6 129 aaKnown RBP14.99□□□□□ -0.01
CLK3-206ENST00000562078 KLHL33A6NCF5 533 aa14.99□□□□□ -0.01
CLK3-206ENST00000562078 CBFA2T2O43439 604 aa14.99□□□□□ -0.01
CLK3-206ENST00000562078 PRC1O43663 620 aa14.99□□□□□ -0.01
CLK3-206ENST00000562078 SLC3A2P08195 630 aaKnown RBP14.99□□□□□ -0.01
CLK3-206ENST00000562078 PDIA3P30101 505 aaKnown RBP14.99□□□□□ -0.01
CLK3-206ENST00000562078 BCAMP50895 628 aa14.99□□□□□ -0.01
CLK3-206ENST00000562078 SF3B2Q13435 895 aaKnown RBP14.99□□□□□ -0.01
CLK3-206ENST00000562078 SF3B3Q15393 1217 aaKnown RBP14.99□□□□□ -0.01
CLK3-206ENST00000562078 EZH2Q15910 746 aaKnown RBP14.99□□□□□ -0.01
CLK3-206ENST00000562078 RALYLQ86SE5 291 aaKnown RBP14.99□□□□□ -0.01
CLK3-206ENST00000562078 MB21D2Q8IYB1 491 aaPredicted RBP14.99□□□□□ -0.01
CLK3-206ENST00000562078 STX10O60499 249 aa14.98□□□□□ -0.01
CLK3-206ENST00000562078 ZNF202O95125 648 aa14.98□□□□□ -0.01
CLK3-206ENST00000562078 GGCXP38435 758 aa14.98□□□□□ -0.01
CLK3-206ENST00000562078 CCNHP51946 323 aaPredicted RBP14.98□□□□□ -0.01
CLK3-206ENST00000562078 TBC1D8BQ0IIM8 1120 aa14.98□□□□□ -0.01
CLK3-206ENST00000562078 TC2NQ8N9U0 490 aa14.98□□□□□ -0.01
CLK3-206ENST00000562078 NBPF3Q9H094 633 aa14.98□□□□□ -0.01
CLK3-206ENST00000562078 HPCAL4Q9UM19 191 aa14.98□□□□□ -0.01
CLK3-206ENST00000562078 IKBKBO14920 756 aa14.98□□□□□ -0.01
CLK3-206ENST00000562078 GUCY1B3Q02153 619 aa14.98□□□□□ -0.01
CLK3-206ENST00000562078 ACTN3Q08043 901 aaPredicted RBP14.98□□□□□ -0.01
CLK3-206ENST00000562078 KIF4BQ2VIQ3 1234 aa14.98□□□□□ -0.01
CLK3-206ENST00000562078 ANKRD18AQ8IVF6 992 aa14.98□□□□□ -0.01
CLK3-206ENST00000562078 KIRREL3Q8IZU9 778 aa14.98□□□□□ -0.01
CLK3-206ENST00000562078 MAGEB6Q8N7X4 407 aa14.98□□□□□ -0.01
CLK3-206ENST00000562078 NCOA7Q8NI08 942 aa14.98□□□□□ -0.01
CLK3-206ENST00000562078 AIDAQ96BJ3 306 aa14.98□□□□□ -0.01
CLK3-206ENST00000562078 ZC3H4Q9UPT8 1303 aaKnown RBP14.98□□□□□ -0.01
CLK3-206ENST00000562078 ANTXR2P58335 489 aa14.97□□□□□ -0.01
CLK3-206ENST00000562078 IQCA1Q86XH1 822 aa14.97□□□□□ -0.01
CLK3-206ENST00000562078 COL23A1Q86Y22 540 aaPredicted RBP14.97□□□□□ -0.01
CLK3-206ENST00000562078 TBC1D10CQ8IV04 446 aa14.97□□□□□ -0.01
CLK3-206ENST00000562078 FAM76AQ8TAV0 307 aa14.97□□□□□ -0.01
CLK3-206ENST00000562078 ZNF274Q96GC6 653 aaPredicted RBP14.97□□□□□ -0.01
CLK3-206ENST00000562078 TRIM6Q9C030 488 aaPredicted RBP14.97□□□□□ -0.01
CLK3-206ENST00000562078 SALL1Q9NSC2 1324 aa14.97□□□□□ -0.01
CLK3-206ENST00000562078 BAZ2AQ9UIF9 1905 aaKnown RBP14.97□□□□□ -0.01
CLK3-206ENST00000562078 SHTN1A0MZ66 631 aa14.97□□□□□ -0.01
CLK3-206ENST00000562078 SERPINB2P05120 415 aa14.97□□□□□ -0.01
CLK3-206ENST00000562078 MAP3K12Q12852 859 aa14.97□□□□□ -0.01
CLK3-206ENST00000562078 ZNF569Q5MCW4 686 aa14.97□□□□□ -0.01
CLK3-206ENST00000562078 ILDR1Q86SU0 546 aaPredicted RBP14.97□□□□□ -0.01
CLK3-206ENST00000562078 FLAD1Q8NFF5 587 aa14.97□□□□□ -0.01
CLK3-206ENST00000562078 VIPAS39Q9H9C1 493 aa14.97□□□□□ -0.01
CLK3-206ENST00000562078 DENND2AQ9ULE3 1009 aa14.97□□□□□ -0.01
CLK3-206ENST00000562078 GRIN2DO15399 1336 aa14.96□□□□□ -0.01
CLK3-206ENST00000562078 CTAGE15A4D2H0 777 aa14.96□□□□□ -0.01
CLK3-206ENST00000562078 SOWAHDA6NJG2 315 aa14.96□□□□□ -0.01
CLK3-206ENST00000562078 MBD4O95243 580 aa14.96□□□□□ -0.01
CLK3-206ENST00000562078 CTAGE8P0CG41 777 aa14.96□□□□□ -0.01
CLK3-206ENST00000562078 ERCC3P19447 782 aa14.96□□□□□ -0.01
CLK3-206ENST00000562078 IRX1P78414 480 aaPredicted RBP14.96□□□□□ -0.01
CLK3-206ENST00000562078 TBX2Q13207 712 aaPredicted RBP14.96□□□□□ -0.01
CLK3-206ENST00000562078 PRR5LQ6MZQ0 368 aa14.96□□□□□ -0.01
CLK3-206ENST00000562078 CTAGE6Q86UF2 777 aa14.96□□□□□ -0.01
CLK3-206ENST00000562078 FMNL3Q8IVF7 1028 aa14.96□□□□□ -0.01
CLK3-206ENST00000562078 CTAGE4Q8IX94 777 aa14.96□□□□□ -0.01
CLK3-206ENST00000562078 IQSEC3Q9UPP2 1182 aaPredicted RBP14.96□□□□□ -0.01
CLK3-206ENST00000562078 KLF18A0A0U1RQI7 1052 aa14.95□□□□□ -0.02
CLK3-206ENST00000562078 GOLGA8BA8MQT2 603 aa14.95□□□□□ -0.02
CLK3-206ENST00000562078 SKAP2O75563 359 aaPredicted RBP14.95□□□□□ -0.02
CLK3-206ENST00000562078 RAB11FIP4Q86YS3 637 aa14.95□□□□□ -0.02
CLK3-206ENST00000562078 AMOTL1Q8IY63 956 aa14.95□□□□□ -0.02
CLK3-206ENST00000562078 FBXL16Q8N461 479 aa14.95□□□□□ -0.02
CLK3-206ENST00000562078 ZNF396Q96N95 335 aaPredicted RBP14.95□□□□□ -0.02
CLK3-206ENST00000562078 STRBPQ96SI9 672 aaKnown RBP14.95□□□□□ -0.02
CLK3-206ENST00000562078 TIAM2Q8IVF5 1701 aa14.95□□□□□ -0.02
CLK3-206ENST00000562078 EIF3HO15372 352 aaKnown RBP eCLIP14.95□□□□□ -0.02
CLK3-206ENST00000562078 CCDC175P0C221 793 aa14.95□□□□□ -0.02
CLK3-206ENST00000562078 TM4SF1P30408 202 aa14.95□□□□□ -0.02
CLK3-206ENST00000562078 GNGT1P63211 74 aa14.95□□□□□ -0.02
CLK3-206ENST00000562078 AKAP17AQ02040 695 aaKnown RBP14.95□□□□□ -0.02
CLK3-206ENST00000562078 CRYMQ14894 314 aa14.95□□□□□ -0.02
CLK3-206ENST00000562078 ADALQ6DHV7 355 aa14.95□□□□□ -0.02
CLK3-206ENST00000562078 OTUD6BQ8N6M0 293 aa14.95□□□□□ -0.02
CLK3-206ENST00000562078 CAMKK2Q96RR4 588 aa14.95□□□□□ -0.02
CLK3-206ENST00000562078 CAPS2Q9BXY5 557 aa14.95□□□□□ -0.02
CLK3-206ENST00000562078 GOLGA6CA6NDK9 693 aa14.94□□□□□ -0.02
CLK3-206ENST00000562078 WTIPA6NIX2 430 aaPredicted RBP14.94□□□□□ -0.02
CLK3-206ENST00000562078 KIF5CO60282 957 aa14.94□□□□□ -0.02
CLK3-206ENST00000562078 RTN2O75298 545 aa14.94□□□□□ -0.02
CLK3-206ENST00000562078 FSBPO95073 299 aa14.94□□□□□ -0.02
CLK3-206ENST00000562078 GOLGA6DP0CG33 693 aa14.94□□□□□ -0.02
CLK3-206ENST00000562078 BAG6P46379 1132 aa14.94□□□□□ -0.02
CLK3-206ENST00000562078 MYL5Q02045 173 aa14.94□□□□□ -0.02
CLK3-206ENST00000562078 STIM1Q13586 685 aa14.94□□□□□ -0.02
CLK3-206ENST00000562078 WLSQ5T9L3 541 aa14.94□□□□□ -0.02
CLK3-206ENST00000562078 NKX2-3Q8TAU0 364 aa14.94□□□□□ -0.02
CLK3-206ENST00000562078 CELF1Q92879 486 aaKnown RBP14.94□□□□□ -0.02
CLK3-206ENST00000562078 PLCD4Q9BRC7 762 aa14.94□□□□□ -0.02
CLK3-206ENST00000562078 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.94□□□□□ -0.02
CLK3-206ENST00000562078 ARMT1Q9H993 441 aa14.94□□□□□ -0.02
CLK3-206ENST00000562078 GOLGA6AQ9NYA3 693 aa14.94□□□□□ -0.02
CLK3-206ENST00000562078 PNPLA7Q6ZV29 1317 aa14.94□□□□□ -0.02
CLK3-206ENST00000562078 CACNA1SQ13698 1873 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms