RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 BLIDQ8IZY5 108 aa12.05□□□□□ -0.48
TPM1-210ENST00000558264 LRRC47Q8N1G4 583 aaKnown RBP12.05□□□□□ -0.48
TPM1-210ENST00000558264 TRMT1Q9NXH9 659 aaKnown RBP12.05□□□□□ -0.48
TPM1-210ENST00000558264 DDX60LQ5H9U9 1706 aaKnown RBP12.05□□□□□ -0.48
TPM1-210ENST00000558264 KLRG2A4D1S0 409 aaPredicted RBP12.04□□□□□ -0.48
TPM1-210ENST00000558264 TMEM232C9JQI7 657 aa12.04□□□□□ -0.48
TPM1-210ENST00000558264 TPM2P07951 284 aa12.04□□□□□ -0.48
TPM1-210ENST00000558264 KLHL10Q6JEL2 608 aa12.04□□□□□ -0.48
TPM1-210ENST00000558264 ZNF579Q8NAF0 562 aaKnown RBP12.04□□□□□ -0.48
TPM1-210ENST00000558264 BLZF1Q9H2G9 400 aa12.04□□□□□ -0.48
TPM1-210ENST00000558264 INF2Q27J81 1249 aa12.04□□□□□ -0.48
TPM1-210ENST00000558264 CFAP100Q494V2 611 aa12.04□□□□□ -0.48
TPM1-210ENST00000558264 NLGN1Q8N2Q7 840 aa12.04□□□□□ -0.48
TPM1-210ENST00000558264 TBC1D22AQ8WUA7 517 aa12.04□□□□□ -0.48
TPM1-210ENST00000558264 AKT1S1Q96B36 256 aa12.04□□□□□ -0.48
TPM1-210ENST00000558264 GAKO14976 1311 aa12.04□□□□□ -0.48
TPM1-210ENST00000558264 ANKRD31Q8N7Z5 1873 aa12.04□□□□□ -0.48
TPM1-210ENST00000558264 FAM196BA6NMK8 535 aa12.04□□□□□ -0.48
TPM1-210ENST00000558264 PP2D1A8MPX8 630 aa12.04□□□□□ -0.48
TPM1-210ENST00000558264 USP17L5A8MUK1 530 aa12.04□□□□□ -0.48
TPM1-210ENST00000558264 STX17P56962 302 aa12.04□□□□□ -0.48
TPM1-210ENST00000558264 CCZ1BP86790 482 aa12.04□□□□□ -0.48
TPM1-210ENST00000558264 CCZ1P86791 482 aaPredicted RBP12.04□□□□□ -0.48
TPM1-210ENST00000558264 ATP2C1P98194 919 aaPredicted RBP12.04□□□□□ -0.48
TPM1-210ENST00000558264 PLIN2Q99541 437 aa12.04□□□□□ -0.48
TPM1-210ENST00000558264 HOOK1Q9UJC3 728 aaKnown RBP12.04□□□□□ -0.48
TPM1-210ENST00000558264 PARP3Q9Y6F1 533 aa12.04□□□□□ -0.48
TPM1-210ENST00000558264 CDK5RAP2Q96SN8 1893 aa12.03□□□□□ -0.48
TPM1-210ENST00000558264 AKR1B1P15121 316 aa12.03□□□□□ -0.48
TPM1-210ENST00000558264 NPR1P16066 1061 aa12.03□□□□□ -0.48
TPM1-210ENST00000558264 PLCG2P16885 1265 aa12.03□□□□□ -0.48
TPM1-210ENST00000558264 UBASH3AP57075 661 aa12.03□□□□□ -0.48
TPM1-210ENST00000558264 TPD52L1Q16890 204 aaPredicted RBP12.03□□□□□ -0.48
TPM1-210ENST00000558264 TMED8Q6PL24 325 aaPredicted RBP12.03□□□□□ -0.48
TPM1-210ENST00000558264 MED15Q96RN5 788 aa12.03□□□□□ -0.48
TPM1-210ENST00000558264 COA1Q9GZY4 146 aa12.03□□□□□ -0.48
TPM1-210ENST00000558264 USP40Q9NVE5 1235 aa12.03□□□□□ -0.48
TPM1-210ENST00000558264 PCDHA4Q9UN74 947 aa12.03□□□□□ -0.48
TPM1-210ENST00000558264 CCDC194A0A1B0GVG4 234 aa12.03□□□□□ -0.48
TPM1-210ENST00000558264 PALM3A6NDB9 673 aaPredicted RBP12.03□□□□□ -0.48
TPM1-210ENST00000558264 STXBP3O00186 592 aa12.03□□□□□ -0.48
TPM1-210ENST00000558264 IKBKBO14920 756 aa12.03□□□□□ -0.48
TPM1-210ENST00000558264 ATP2B2Q01814 1243 aa12.03□□□□□ -0.48
TPM1-210ENST00000558264 NFIAQ12857 509 aa12.03□□□□□ -0.48
TPM1-210ENST00000558264 ARMCX5Q6P1M9 558 aa12.03□□□□□ -0.48
TPM1-210ENST00000558264 KIAA0825Q8IV33 1275 aa12.03□□□□□ -0.48
TPM1-210ENST00000558264 NEDD1Q8NHV4 660 aa12.03□□□□□ -0.48
TPM1-210ENST00000558264 ZNF592Q92610 1267 aa12.03□□□□□ -0.48
TPM1-210ENST00000558264 ANKS1AQ92625 1134 aa12.03□□□□□ -0.48
TPM1-210ENST00000558264 PAGE5Q96GU1 130 aa12.03□□□□□ -0.48
TPM1-210ENST00000558264 PCDHA6Q9UN73 950 aa12.03□□□□□ -0.48
TPM1-210ENST00000558264 NFE2L3Q9Y4A8 694 aa12.03□□□□□ -0.48
TPM1-210ENST00000558264 PCDHA8Q9Y5H6 950 aa12.03□□□□□ -0.48
TPM1-210ENST00000558264 ADAMTSL1Q8N6G6 1762 aa12.02□□□□□ -0.48
TPM1-210ENST00000558264 PARP1P09874 1014 aaKnown RBP12.02□□□□□ -0.49
TPM1-210ENST00000558264 CHRNA5P30532 468 aa12.02□□□□□ -0.49
TPM1-210ENST00000558264 NAPAP54920 295 aa12.02□□□□□ -0.49
TPM1-210ENST00000558264 TCP10Q12799 353 aa12.02□□□□□ -0.49
TPM1-210ENST00000558264 SHROOM1Q2M3G4 852 aaPredicted RBP12.02□□□□□ -0.49
TPM1-210ENST00000558264 ZFPM1Q8IX07 1006 aa12.02□□□□□ -0.49
TPM1-210ENST00000558264 SLF2Q8IX21 1173 aa12.02□□□□□ -0.49
TPM1-210ENST00000558264 FERMT2Q96AC1 680 aa12.02□□□□□ -0.49
TPM1-210ENST00000558264 PIGSQ96S52 555 aa12.02□□□□□ -0.49
TPM1-210ENST00000558264 TMEM60Q9H2L4 133 aa12.02□□□□□ -0.49
TPM1-210ENST00000558264 ZNF287Q9HBT7 754 aa12.02□□□□□ -0.49
TPM1-210ENST00000558264 SAMSN1Q9NSI8 373 aaKnown RBP12.02□□□□□ -0.49
TPM1-210ENST00000558264 TCP11L1Q9NUJ3 509 aa12.02□□□□□ -0.49
TPM1-210ENST00000558264 RAD21O60216 631 aa12.02□□□□□ -0.49
TPM1-210ENST00000558264 CD44P16070 742 aaKnown RBP12.02□□□□□ -0.49
TPM1-210ENST00000558264 SARSP49591 514 aaKnown RBP12.02□□□□□ -0.49
TPM1-210ENST00000558264 MORC3Q14149 939 aa12.02□□□□□ -0.49
TPM1-210ENST00000558264 FAM163AQ96GL9 167 aaPredicted RBP12.02□□□□□ -0.49
TPM1-210ENST00000558264 ARID3AQ99856 593 aa12.02□□□□□ -0.49
TPM1-210ENST00000558264 GPCPD1Q9NPB8 672 aa12.02□□□□□ -0.49
TPM1-210ENST00000558264 MPHOSPH10O00566 681 aaKnown RBP12.01□□□□□ -0.49
TPM1-210ENST00000558264 SLFN14P0C7P3 912 aa12.01□□□□□ -0.49
TPM1-210ENST00000558264 CALML3P27482 149 aa12.01□□□□□ -0.49
TPM1-210ENST00000558264 KARSQ15046 597 aaKnown RBP12.01□□□□□ -0.49
TPM1-210ENST00000558264 BARHL2Q9NY43 387 aa12.01□□□□□ -0.49
TPM1-210ENST00000558264 MYH1P12882 1939 aa12.01□□□□□ -0.49
TPM1-210ENST00000558264 GNAQP50148 359 aa12.01□□□□□ -0.49
TPM1-210ENST00000558264 RBM5P52756 815 aaKnown RBP eCLIP12.01□□□□□ -0.49
TPM1-210ENST00000558264 C2CD5Q86YS7 1000 aa12.01□□□□□ -0.49
TPM1-210ENST00000558264 INTS13Q9NVM9 706 aa12.01□□□□□ -0.49
TPM1-210ENST00000558264 LTBP1Q14766 1721 aa12.01□□□□□ -0.49
TPM1-210ENST00000558264 TNNT1P13805 278 aa12□□□□□ -0.49
TPM1-210ENST00000558264 CDK11BP21127 795 aaKnown RBP12□□□□□ -0.49
TPM1-210ENST00000558264 PDE6BP35913 854 aa12□□□□□ -0.49
TPM1-210ENST00000558264 CDC42EP5Q6NZY7 148 aa12□□□□□ -0.49
TPM1-210ENST00000558264 RASSF8Q8NHQ8 419 aa12□□□□□ -0.49
TPM1-210ENST00000558264 MTRQ99707 1265 aa12□□□□□ -0.49
TPM1-210ENST00000558264 TMEM260Q9NX78 707 aa12□□□□□ -0.49
TPM1-210ENST00000558264 MAPK8IP1Q9UQF2 711 aa12□□□□□ -0.49
TPM1-210ENST00000558264 RIOK3O14730 519 aaKnown RBP12□□□□□ -0.49
TPM1-210ENST00000558264 BMP15O95972 392 aa12□□□□□ -0.49
TPM1-210ENST00000558264 TOP1P11387 765 aaKnown RBP12□□□□□ -0.49
TPM1-210ENST00000558264 CUL4BQ13620 913 aa12□□□□□ -0.49
TPM1-210ENST00000558264 LETM2Q2VYF4 491 aa12□□□□□ -0.49
TPM1-210ENST00000558264 CCDC178Q5BJE1 867 aa12□□□□□ -0.49
TPM1-210ENST00000558264 NT5DC1Q5TFE4 455 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms