RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 LBX2Q6XYB7 198 aa7.9□□□□□ -1.14
LINC00517-202ENST00000554257 CCDC83Q8IWF9 413 aa7.9□□□□□ -1.14
LINC00517-202ENST00000554257 ZNF280CQ8ND82 737 aa7.9□□□□□ -1.14
LINC00517-202ENST00000554257 WNK4Q96J92 1243 aa7.9□□□□□ -1.14
LINC00517-202ENST00000554257 GBA2Q9HCG7 927 aaPredicted RBP7.9□□□□□ -1.14
LINC00517-202ENST00000554257 ARID2Q68CP9 1835 aa7.9□□□□□ -1.15
LINC00517-202ENST00000554257 EDIL3O43854 480 aa7.9□□□□□ -1.15
LINC00517-202ENST00000554257 CALM1P0DP23 149 aa7.9□□□□□ -1.15
LINC00517-202ENST00000554257 CALM2P0DP24 149 aa7.9□□□□□ -1.15
LINC00517-202ENST00000554257 CALM3P0DP25 149 aa7.9□□□□□ -1.15
LINC00517-202ENST00000554257 GHRHRQ02643 423 aa7.9□□□□□ -1.15
LINC00517-202ENST00000554257 PPP2R5BQ15173 497 aa7.9□□□□□ -1.15
LINC00517-202ENST00000554257 TREML2Q5T2D2 321 aa7.9□□□□□ -1.15
LINC00517-202ENST00000554257 SMC1BQ8NDV3 1235 aa7.9□□□□□ -1.15
LINC00517-202ENST00000554257 TNFRSF25Q93038 417 aa7.9□□□□□ -1.15
LINC00517-202ENST00000554257 RANBP17Q9H2T7 1088 aaKnown RBP7.9□□□□□ -1.15
LINC00517-202ENST00000554257 GPBP1L1Q9HC44 474 aaPredicted RBP7.9□□□□□ -1.15
LINC00517-202ENST00000554257 MCM3APO60318 1980 aa7.89□□□□□ -1.15
LINC00517-202ENST00000554257 PRPF3O43395 683 aaKnown RBP7.89□□□□□ -1.15
LINC00517-202ENST00000554257 VCAM1P19320 739 aa7.89□□□□□ -1.15
LINC00517-202ENST00000554257 IREB2P48200 963 aaKnown RBP7.89□□□□□ -1.15
LINC00517-202ENST00000554257 SLC4A3P48751 1232 aa7.89□□□□□ -1.15
LINC00517-202ENST00000554257 METAP2P50579 478 aaKnown RBP eCLIP7.89□□□□□ -1.15
LINC00517-202ENST00000554257 MTMR2Q13614 643 aa7.89□□□□□ -1.15
LINC00517-202ENST00000554257 PKP1Q13835 747 aa7.89□□□□□ -1.15
LINC00517-202ENST00000554257 RAB3GAP1Q15042 981 aa7.89□□□□□ -1.15
LINC00517-202ENST00000554257 ASPRV1Q53RT3 343 aa7.89□□□□□ -1.15
LINC00517-202ENST00000554257 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.89□□□□□ -1.15
LINC00517-202ENST00000554257 PTPN18Q99952 460 aa7.89□□□□□ -1.15
LINC00517-202ENST00000554257 JMJD4Q9H9V9 463 aa7.89□□□□□ -1.15
LINC00517-202ENST00000554257 SLC12A7Q9Y666 1083 aa7.89□□□□□ -1.15
LINC00517-202ENST00000554257 DOCK3Q8IZD9 2030 aa7.89□□□□□ -1.15
LINC00517-202ENST00000554257 CELF2O95319 508 aaKnown RBP7.89□□□□□ -1.15
LINC00517-202ENST00000554257 SLC10A3P09131 477 aa7.89□□□□□ -1.15
LINC00517-202ENST00000554257 HOXA7P31268 230 aaPredicted RBP7.89□□□□□ -1.15
LINC00517-202ENST00000554257 CCT2P78371 535 aaKnown RBP7.89□□□□□ -1.15
LINC00517-202ENST00000554257 PPP4R3BQ5MIZ7 849 aa7.89□□□□□ -1.15
LINC00517-202ENST00000554257 ERO1BQ86YB8 467 aa7.89□□□□□ -1.15
LINC00517-202ENST00000554257 CMTR1Q8N1G2 835 aaKnown RBP7.89□□□□□ -1.15
LINC00517-202ENST00000554257 OPTNQ96CV9 577 aa7.89□□□□□ -1.15
LINC00517-202ENST00000554257 NUP88Q99567 741 aaPredicted RBP7.89□□□□□ -1.15
LINC00517-202ENST00000554257 ELP3Q9H9T3 547 aa7.89□□□□□ -1.15
LINC00517-202ENST00000554257 RBM28Q9NW13 759 aaKnown RBP7.89□□□□□ -1.15
LINC00517-202ENST00000554257 PTPDC1A2A3K4 754 aa7.88□□□□□ -1.15
LINC00517-202ENST00000554257 SART3Q15020 963 aaKnown RBP7.88□□□□□ -1.15
LINC00517-202ENST00000554257 MICU3Q86XE3 530 aa7.88□□□□□ -1.15
LINC00517-202ENST00000554257 LPAR1Q92633 364 aa7.88□□□□□ -1.15
LINC00517-202ENST00000554257 AIFM3Q96NN9 605 aa7.88□□□□□ -1.15
LINC00517-202ENST00000554257 RNF26Q9BY78 433 aaPredicted RBP7.88□□□□□ -1.15
LINC00517-202ENST00000554257 CPVLQ9H3G5 476 aa7.88□□□□□ -1.15
LINC00517-202ENST00000554257 KAT14Q9H8E8 782 aa7.88□□□□□ -1.15
LINC00517-202ENST00000554257 CCDC69A6NI79 296 aa7.88□□□□□ -1.15
LINC00517-202ENST00000554257 GOLGA8AA7E2F4 631 aa7.88□□□□□ -1.15
LINC00517-202ENST00000554257 WDR46O15213 610 aaKnown RBP7.88□□□□□ -1.15
LINC00517-202ENST00000554257 STK3Q13188 491 aa7.88□□□□□ -1.15
LINC00517-202ENST00000554257 RTN1Q16799 776 aa7.88□□□□□ -1.15
LINC00517-202ENST00000554257 SPRYD7Q5W111 196 aa7.88□□□□□ -1.15
LINC00517-202ENST00000554257 SLFN13Q68D06 897 aa7.88□□□□□ -1.15
LINC00517-202ENST00000554257 CATSPERGQ6ZRH7 1159 aa7.88□□□□□ -1.15
LINC00517-202ENST00000554257 CATIPQ7Z7H3 387 aa7.88□□□□□ -1.15
LINC00517-202ENST00000554257 PROCA1Q8NCQ7 364 aaPredicted RBP7.88□□□□□ -1.15
LINC00517-202ENST00000554257 P2RX7Q99572 595 aaKnown RBP7.88□□□□□ -1.15
LINC00517-202ENST00000554257 FRMPD2Q68DX3 1309 aaPredicted RBP7.88□□□□□ -1.15
LINC00517-202ENST00000554257 RASSF10A6NK89 507 aa7.88□□□□□ -1.15
LINC00517-202ENST00000554257 C19orf81C9J6K1 198 aa7.88□□□□□ -1.15
LINC00517-202ENST00000554257 USP17L10C9JJH3 530 aa7.88□□□□□ -1.15
LINC00517-202ENST00000554257 STXBP3O00186 592 aa7.88□□□□□ -1.15
LINC00517-202ENST00000554257 MPHOSPH10O00566 681 aaKnown RBP7.88□□□□□ -1.15
LINC00517-202ENST00000554257 CXCL11O14625 94 aa7.88□□□□□ -1.15
LINC00517-202ENST00000554257 GOLGA8HP0CJ92 632 aa7.88□□□□□ -1.15
LINC00517-202ENST00000554257 CLK2P49760 499 aaKnown RBP7.88□□□□□ -1.15
LINC00517-202ENST00000554257 NOL8Q76FK4 1167 aaKnown RBP7.88□□□□□ -1.15
LINC00517-202ENST00000554257 HSCBQ8IWL3 235 aa7.88□□□□□ -1.15
LINC00517-202ENST00000554257 CCDC144CPQ8IYA2 1237 aa7.88□□□□□ -1.15
LINC00517-202ENST00000554257 ADGRF4Q8IZF3 695 aa7.88□□□□□ -1.15
LINC00517-202ENST00000554257 PHKBQ93100 1093 aa7.88□□□□□ -1.15
LINC00517-202ENST00000554257 TOMM22Q9NS69 142 aa7.88□□□□□ -1.15
LINC00517-202ENST00000554257 STX8Q9UNK0 236 aa7.88□□□□□ -1.15
LINC00517-202ENST00000554257 SLC45A1Q9Y2W3 748 aa7.88□□□□□ -1.15
LINC00517-202ENST00000554257 CEP350Q5VT06 3117 aa7.88□□□□□ -1.15
LINC00517-202ENST00000554257 CENPFP49454 3210 aa7.88□□□□□ -1.15
LINC00517-202ENST00000554257 DCAF8L1A6NGE4 600 aa7.87□□□□□ -1.15
LINC00517-202ENST00000554257 PPP1R12BO60237 982 aaPredicted RBP7.87□□□□□ -1.15
LINC00517-202ENST00000554257 ZBTB48P10074 688 aaPredicted RBP7.87□□□□□ -1.15
LINC00517-202ENST00000554257 YY1P25490 414 aa7.87□□□□□ -1.15
LINC00517-202ENST00000554257 PFKFB3Q16875 520 aaPredicted RBP7.87□□□□□ -1.15
LINC00517-202ENST00000554257 KCTD1Q719H9 257 aa7.87□□□□□ -1.15
LINC00517-202ENST00000554257 SLKQ9H2G2 1235 aaPredicted RBP7.87□□□□□ -1.15
LINC00517-202ENST00000554257 ARHGEF10LQ9HCE6 1279 aa7.87□□□□□ -1.15
LINC00517-202ENST00000554257 CABP5Q9NP86 173 aa7.87□□□□□ -1.15
LINC00517-202ENST00000554257 ZHX2Q9Y6X8 837 aa7.87□□□□□ -1.15
LINC00517-202ENST00000554257 ATP2A1O14983 1001 aa7.87□□□□□ -1.15
LINC00517-202ENST00000554257 PRKG1Q13976 671 aa7.87□□□□□ -1.15
LINC00517-202ENST00000554257 FAM83BQ5T0W9 1011 aa7.87□□□□□ -1.15
LINC00517-202ENST00000554257 GPATCH4Q5T3I0 446 aaKnown RBP7.87□□□□□ -1.15
LINC00517-202ENST00000554257 ARMC9Q7Z3E5 817 aa7.87□□□□□ -1.15
LINC00517-202ENST00000554257 BRI3BPQ8WY22 251 aa7.87□□□□□ -1.15
LINC00517-202ENST00000554257 PHF20Q9BVI0 1012 aa7.87□□□□□ -1.15
LINC00517-202ENST00000554257 GOPCQ9HD26 462 aa7.87□□□□□ -1.15
LINC00517-202ENST00000554257 MYPNQ86TC9 1320 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms