RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 VPS37CA5D8V6 355 aaPredicted RBP12.57□□□□□ -0.4
PABPN1-203ENST00000553960 F5H6K3 240 aa12.57□□□□□ -0.4
PABPN1-203ENST00000553960 YEATS4O95619 227 aa12.57□□□□□ -0.4
PABPN1-203ENST00000553960 MBD3O95983 291 aa12.57□□□□□ -0.4
PABPN1-203ENST00000553960 GH2P01242 217 aa12.57□□□□□ -0.4
PABPN1-203ENST00000553960 FDX1P10109 184 aa12.57□□□□□ -0.4
PABPN1-203ENST00000553960 RXRAP19793 462 aa12.57□□□□□ -0.4
PABPN1-203ENST00000553960 KLRC3Q07444 240 aa12.57□□□□□ -0.4
PABPN1-203ENST00000553960 ORC2Q13416 577 aaPredicted RBP12.57□□□□□ -0.4
PABPN1-203ENST00000553960 SAFBQ15424 915 aaKnown RBP eCLIP12.57□□□□□ -0.4
PABPN1-203ENST00000553960 GPR162Q16538 588 aa12.57□□□□□ -0.4
PABPN1-203ENST00000553960 STK11IPQ8N1F8 1099 aa12.57□□□□□ -0.4
PABPN1-203ENST00000553960 STAG2Q8N3U4 1231 aa12.57□□□□□ -0.4
PABPN1-203ENST00000553960 TNFRSF25Q93038 417 aa12.57□□□□□ -0.4
PABPN1-203ENST00000553960 C12orf42Q96LP6 360 aa12.57□□□□□ -0.4
PABPN1-203ENST00000553960 ZNF396Q96N95 335 aaPredicted RBP12.57□□□□□ -0.4
PABPN1-203ENST00000553960 NAP1L2Q9ULW6 460 aaPredicted RBP12.57□□□□□ -0.4
PABPN1-203ENST00000553960 PHIPQ8WWQ0 1821 aa12.56□□□□□ -0.4
PABPN1-203ENST00000553960 PNMA6FA0A0J9YX94 578 aa12.56□□□□□ -0.4
PABPN1-203ENST00000553960 M0R2N6 131 aa12.56□□□□□ -0.4
PABPN1-203ENST00000553960 BMP15O95972 392 aa12.56□□□□□ -0.4
PABPN1-203ENST00000553960 JAG1P78504 1218 aa12.56□□□□□ -0.4
PABPN1-203ENST00000553960 RILPL1Q5EBL4 403 aa12.56□□□□□ -0.4
PABPN1-203ENST00000553960 ANGEL2Q5VTE6 544 aaKnown RBP12.56□□□□□ -0.4
PABPN1-203ENST00000553960 MYSM1Q5VVJ2 828 aa12.56□□□□□ -0.4
PABPN1-203ENST00000553960 NOSTRINQ8IVI9 506 aa12.56□□□□□ -0.4
PABPN1-203ENST00000553960 SAMD3Q8N6K7 520 aa12.56□□□□□ -0.4
PABPN1-203ENST00000553960 KLRG1Q96E93 195 aa12.56□□□□□ -0.4
PABPN1-203ENST00000553960 RRP36Q96EU6 259 aaKnown RBP12.56□□□□□ -0.4
PABPN1-203ENST00000553960 VCPKMTQ9H867 229 aa12.56□□□□□ -0.4
PABPN1-203ENST00000553960 GOPCQ9HD26 462 aa12.56□□□□□ -0.4
PABPN1-203ENST00000553960 SSC5DA1L4H1 1573 aa12.56□□□□□ -0.4
PABPN1-203ENST00000553960 USP17L5A8MUK1 530 aa12.55□□□□□ -0.4
PABPN1-203ENST00000553960 C19orf81C9J6K1 198 aa12.55□□□□□ -0.4
PABPN1-203ENST00000553960 USP14P54578 494 aa12.55□□□□□ -0.4
PABPN1-203ENST00000553960 UBE2HP62256 183 aa12.55□□□□□ -0.4
PABPN1-203ENST00000553960 SLC4A8Q2Y0W8 1093 aa12.55□□□□□ -0.4
PABPN1-203ENST00000553960 FAM160B2Q86V87 743 aa12.55□□□□□ -0.4
PABPN1-203ENST00000553960 SCYL3Q8IZE3 742 aa12.55□□□□□ -0.4
PABPN1-203ENST00000553960 TAF1DQ9H5J8 278 aaPredicted RBP12.55□□□□□ -0.4
PABPN1-203ENST00000553960 GGA3Q9NZ52 723 aa12.55□□□□□ -0.4
PABPN1-203ENST00000553960 A0A1W2PRG0 241 aa12.54□□□□□ -0.4
PABPN1-203ENST00000553960 POTECB2RU33 542 aa12.54□□□□□ -0.4
PABPN1-203ENST00000553960 MPHOSPH10O00566 681 aaKnown RBP12.54□□□□□ -0.4
PABPN1-203ENST00000553960 ZBTB5O15062 677 aa12.54□□□□□ -0.4
PABPN1-203ENST00000553960 NDUFB10O96000 172 aa12.54□□□□□ -0.4
PABPN1-203ENST00000553960 GNA11P29992 359 aa12.54□□□□□ -0.4
PABPN1-203ENST00000553960 EPHX2P34913 555 aa12.54□□□□□ -0.4
PABPN1-203ENST00000553960 GHRHRQ02643 423 aa12.54□□□□□ -0.4
PABPN1-203ENST00000553960 SH3D19Q5HYK7 790 aa12.54□□□□□ -0.4
PABPN1-203ENST00000553960 NBPF12Q5TAG4 269 aaPredicted RBP12.54□□□□□ -0.4
PABPN1-203ENST00000553960 SLFN13Q68D06 897 aa12.54□□□□□ -0.4
PABPN1-203ENST00000553960 USP17L2Q6R6M4 530 aa12.54□□□□□ -0.4
PABPN1-203ENST00000553960 USP48Q86UV5 1035 aa12.54□□□□□ -0.4
PABPN1-203ENST00000553960 CCDC144CPQ8IYA2 1237 aa12.54□□□□□ -0.4
PABPN1-203ENST00000553960 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.54□□□□□ -0.4
PABPN1-203ENST00000553960 RBM46Q8TBY0 533 aaKnown RBP12.54□□□□□ -0.4
PABPN1-203ENST00000553960 BICD2Q8TD16 824 aa12.54□□□□□ -0.4
PABPN1-203ENST00000553960 CHURC1Q8WUH1 139 aa12.54□□□□□ -0.4
PABPN1-203ENST00000553960 DCPSQ96C86 337 aaKnown RBP12.54□□□□□ -0.4
PABPN1-203ENST00000553960 SHISA4Q96DD7 197 aa12.54□□□□□ -0.4
PABPN1-203ENST00000553960 JMJD4Q9H9V9 463 aa12.54□□□□□ -0.4
PABPN1-203ENST00000553960 BRMS1Q9HCU9 246 aa12.54□□□□□ -0.4
PABPN1-203ENST00000553960 MYPNQ86TC9 1320 aa12.54□□□□□ -0.4
PABPN1-203ENST00000553960 FAM237AA0A1B0GTK4 181 aa12.53□□□□□ -0.4
PABPN1-203ENST00000553960 STXBP3O00186 592 aa12.53□□□□□ -0.4
PABPN1-203ENST00000553960 WDR46O15213 610 aaKnown RBP12.53□□□□□ -0.4
PABPN1-203ENST00000553960 PPP6R2O75170 966 aa12.53□□□□□ -0.4
PABPN1-203ENST00000553960 BMP3P12645 472 aa12.53□□□□□ -0.4
PABPN1-203ENST00000553960 SLC1A4P43007 532 aa12.53□□□□□ -0.4
PABPN1-203ENST00000553960 FKBP1BP68106 108 aa12.53□□□□□ -0.4
PABPN1-203ENST00000553960 DNM1Q05193 864 aaKnown RBP12.53□□□□□ -0.4
PABPN1-203ENST00000553960 SLC39A14Q15043 492 aa12.53□□□□□ -0.4
PABPN1-203ENST00000553960 SULF1Q8IWU6 871 aa12.53□□□□□ -0.4
PABPN1-203ENST00000553960 CDAN1Q8IWY9 1227 aa12.53□□□□□ -0.4
PABPN1-203ENST00000553960 DIS3L2Q8IYB7 885 aaKnown RBP12.53□□□□□ -0.4
PABPN1-203ENST00000553960 LINC00301Q8NCQ3 95 aa12.53□□□□□ -0.4
PABPN1-203ENST00000553960 KCNG4Q8TDN1 519 aa12.53□□□□□ -0.4
PABPN1-203ENST00000553960 LEO1Q8WVC0 666 aaPredicted RBP12.53□□□□□ -0.4
PABPN1-203ENST00000553960 AS3MTQ9HBK9 375 aa12.53□□□□□ -0.4
PABPN1-203ENST00000553960 FEM1BQ9UK73 627 aa12.53□□□□□ -0.4
PABPN1-203ENST00000553960 ISY1Q9ULR0 285 aaKnown RBP12.53□□□□□ -0.4
PABPN1-203ENST00000553960 PCDHA4Q9UN74 947 aa12.53□□□□□ -0.4
PABPN1-203ENST00000553960 ASTN2O75129 1339 aaPredicted RBP12.53□□□□□ -0.4
PABPN1-203ENST00000553960 A0A1W2PQ27 194 aa12.52□□□□□ -0.41
PABPN1-203ENST00000553960 A0A1W2PQ64 194 aa12.52□□□□□ -0.41
PABPN1-203ENST00000553960 A0A1W2PQD8 194 aa12.52□□□□□ -0.41
PABPN1-203ENST00000553960 FAM196BA6NMK8 535 aa12.52□□□□□ -0.41
PABPN1-203ENST00000553960 TRAK2O60296 914 aa12.52□□□□□ -0.41
PABPN1-203ENST00000553960 KRT2P35908 639 aa12.52□□□□□ -0.41
PABPN1-203ENST00000553960 MCTP1Q6DN14 999 aa12.52□□□□□ -0.41
PABPN1-203ENST00000553960 RAB11FIP4Q86YS3 637 aa12.52□□□□□ -0.41
PABPN1-203ENST00000553960 ADGRF4Q8IZF3 695 aa12.52□□□□□ -0.41
PABPN1-203ENST00000553960 LRRC47Q8N1G4 583 aaKnown RBP12.52□□□□□ -0.41
PABPN1-203ENST00000553960 AIFM3Q96NN9 605 aa12.52□□□□□ -0.41
PABPN1-203ENST00000553960 MAP3K20Q9NYL2 800 aaKnown RBP12.52□□□□□ -0.41
PABPN1-203ENST00000553960 SEC63Q9UGP8 760 aaKnown RBP12.52□□□□□ -0.41
PABPN1-203ENST00000553960 PARP14Q460N5 1801 aa12.51□□□□□ -0.41
PABPN1-203ENST00000553960 BTBD18B2RXH4 712 aa12.51□□□□□ -0.41
PABPN1-203ENST00000553960 KIF28PB7ZC32 967 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms