RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 RIOX1Q9H6W3 641 aa22.53■■□□□ 1.2
RBFOX1-215ENST00000553186 SH3GLB2Q9NR46 395 aa22.53■■□□□ 1.2
RBFOX1-215ENST00000553186 FRMPD2Q68DX3 1309 aaPredicted RBP22.53■■□□□ 1.2
RBFOX1-215ENST00000553186 LIG1P18858 919 aa22.53■■□□□ 1.2
RBFOX1-215ENST00000553186 KRT2P35908 639 aa22.53■■□□□ 1.2
RBFOX1-215ENST00000553186 TOB1P50616 345 aaPredicted RBP22.53■■□□□ 1.2
RBFOX1-215ENST00000553186 ICA1Q05084 483 aa22.53■■□□□ 1.2
RBFOX1-215ENST00000553186 ZNF543Q08ER8 600 aa22.53■■□□□ 1.2
RBFOX1-215ENST00000553186 GAS2L3Q86XJ1 694 aa22.53■■□□□ 1.2
RBFOX1-215ENST00000553186 TNFRSF25Q93038 417 aa22.53■■□□□ 1.2
RBFOX1-215ENST00000553186 MAP3K10Q02779 954 aa22.52■■□□□ 1.2
RBFOX1-215ENST00000553186 RASA3Q14644 834 aa22.52■■□□□ 1.2
RBFOX1-215ENST00000553186 TBC1D10BQ4KMP7 808 aaPredicted RBP22.52■■□□□ 1.2
RBFOX1-215ENST00000553186 TYW1BQ6NUM6 668 aa22.52■■□□□ 1.2
RBFOX1-215ENST00000553186 KCNG4Q8TDN1 519 aa22.52■■□□□ 1.2
RBFOX1-215ENST00000553186 GPKOWQ92917 476 aaPredicted RBP eCLIP22.52■■□□□ 1.2
RBFOX1-215ENST00000553186 UBA5Q9GZZ9 404 aa22.52■■□□□ 1.2
RBFOX1-215ENST00000553186 STK38Q15208 465 aa22.52■■□□□ 1.2
RBFOX1-215ENST00000553186 SF3A1Q15459 793 aaKnown RBP22.52■■□□□ 1.2
RBFOX1-215ENST00000553186 WWC2Q6AWC2 1192 aa22.52■■□□□ 1.2
RBFOX1-215ENST00000553186 PCDHA7Q9UN72 937 aa22.52■■□□□ 1.2
RBFOX1-215ENST00000553186 SCAF8Q9UPN6 1271 aaKnown RBP22.52■■□□□ 1.2
RBFOX1-215ENST00000553186 ASTN2O75129 1339 aaPredicted RBP22.51■■□□□ 1.19
RBFOX1-215ENST00000553186 SPTLC2O15270 562 aa22.51■■□□□ 1.19
RBFOX1-215ENST00000553186 ME1P48163 572 aa22.51■■□□□ 1.19
RBFOX1-215ENST00000553186 SLC39A14Q15043 492 aa22.51■■□□□ 1.19
RBFOX1-215ENST00000553186 PTPAQ15257 358 aa22.51■■□□□ 1.19
RBFOX1-215ENST00000553186 BARHL2Q9NY43 387 aa22.51■■□□□ 1.19
RBFOX1-215ENST00000553186 TNNI2P48788 182 aa22.5■■□□□ 1.19
RBFOX1-215ENST00000553186 KIF4BQ2VIQ3 1234 aa22.5■■□□□ 1.19
RBFOX1-215ENST00000553186 EARS2Q5JPH6 523 aaKnown RBP22.5■■□□□ 1.19
RBFOX1-215ENST00000553186 CCDC183Q5T5S1 534 aa22.5■■□□□ 1.19
RBFOX1-215ENST00000553186 TEPSINQ96N21 525 aa22.5■■□□□ 1.19
RBFOX1-215ENST00000553186 CABP5Q9NP86 173 aa22.5■■□□□ 1.19
RBFOX1-215ENST00000553186 NLRP5P59047 1200 aa22.5■■□□□ 1.19
RBFOX1-215ENST00000553186 TNFAIP1Q13829 316 aa22.5■■□□□ 1.19
RBFOX1-215ENST00000553186 RILPL1Q5EBL4 403 aa22.5■■□□□ 1.19
RBFOX1-215ENST00000553186 MIGA2Q7L4E1 593 aa22.5■■□□□ 1.19
RBFOX1-215ENST00000553186 GPC2Q8N158 579 aa22.5■■□□□ 1.19
RBFOX1-215ENST00000553186 BICD2Q8TD16 824 aa22.5■■□□□ 1.19
RBFOX1-215ENST00000553186 SYCE3A1L190 88 aa22.49■■□□□ 1.19
RBFOX1-215ENST00000553186 STXBP3O00186 592 aa22.49■■□□□ 1.19
RBFOX1-215ENST00000553186 ADAMTS3O15072 1205 aa22.49■■□□□ 1.19
RBFOX1-215ENST00000553186 YBX3P16989 372 aaKnown RBP eCLIP22.49■■□□□ 1.19
RBFOX1-215ENST00000553186 GPATCH4Q5T3I0 446 aaKnown RBP22.49■■□□□ 1.19
RBFOX1-215ENST00000553186 ADALQ6DHV7 355 aa22.49■■□□□ 1.19
RBFOX1-215ENST00000553186 RRP36Q96EU6 259 aaKnown RBP22.49■■□□□ 1.19
RBFOX1-215ENST00000553186 BRMS1Q9HCU9 246 aa22.49■■□□□ 1.19
RBFOX1-215ENST00000553186 GPCPD1Q9NPB8 672 aa22.49■■□□□ 1.19
RBFOX1-215ENST00000553186 HEATR3Q7Z4Q2 680 aa22.49■■□□□ 1.19
RBFOX1-215ENST00000553186 PIGSQ96S52 555 aa22.49■■□□□ 1.19
RBFOX1-215ENST00000553186 GPRC5DQ9NZD1 345 aa22.49■■□□□ 1.19
RBFOX1-215ENST00000553186 ISY1Q9ULR0 285 aaKnown RBP22.49■■□□□ 1.19
RBFOX1-215ENST00000553186 GOLGA6L3A6NEY3 463 aa22.48■■□□□ 1.19
RBFOX1-215ENST00000553186 FAM205CA6NFA0 338 aa22.48■■□□□ 1.19
RBFOX1-215ENST00000553186 CALML3P27482 149 aa22.48■■□□□ 1.19
RBFOX1-215ENST00000553186 TTBK2Q6IQ55 1244 aa22.48■■□□□ 1.19
RBFOX1-215ENST00000553186 FAM177A1Q8N128 213 aaPredicted RBP22.48■■□□□ 1.19
RBFOX1-215ENST00000553186 VAT1LQ9HCJ6 419 aa22.48■■□□□ 1.19
RBFOX1-215ENST00000553186 HACL1Q9UJ83 578 aa22.48■■□□□ 1.19
RBFOX1-215ENST00000553186 MYH4Q9Y623 1939 aa22.48■■□□□ 1.19
RBFOX1-215ENST00000553186 H7C1D1 291 aa22.48■■□□□ 1.19
RBFOX1-215ENST00000553186 HOMER1Q86YM7 354 aa22.48■■□□□ 1.19
RBFOX1-215ENST00000553186 GMCL1P1Q8NEA9 526 aa22.48■■□□□ 1.19
RBFOX1-215ENST00000553186 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.48■■□□□ 1.19
RBFOX1-215ENST00000553186 DACT1Q9NYF0 836 aa22.48■■□□□ 1.19
RBFOX1-215ENST00000553186 A0A1W2PRG0 241 aa22.47■■□□□ 1.19
RBFOX1-215ENST00000553186 NR1I2O75469 434 aa22.47■■□□□ 1.19
RBFOX1-215ENST00000553186 NOM1Q5C9Z4 860 aaKnown RBP22.47■■□□□ 1.19
RBFOX1-215ENST00000553186 AXDND1Q5T1B0 1012 aaPredicted RBP22.47■■□□□ 1.19
RBFOX1-215ENST00000553186 SLFN13Q68D06 897 aa22.47■■□□□ 1.19
RBFOX1-215ENST00000553186 KCTD1Q719H9 257 aa22.47■■□□□ 1.19
RBFOX1-215ENST00000553186 DCAF4Q8WV16 495 aa22.47■■□□□ 1.19
RBFOX1-215ENST00000553186 ZBTB21Q9ULJ3 1066 aa22.47■■□□□ 1.19
RBFOX1-215ENST00000553186 DICER1Q9UPY3 1922 aaKnown RBP22.47■■□□□ 1.19
RBFOX1-215ENST00000553186 A0A1W2PQ27 194 aa22.46■■□□□ 1.19
RBFOX1-215ENST00000553186 A0A1W2PQ64 194 aa22.46■■□□□ 1.19
RBFOX1-215ENST00000553186 A0A1W2PQD8 194 aa22.46■■□□□ 1.19
RBFOX1-215ENST00000553186 F5H6K3 240 aa22.46■■□□□ 1.19
RBFOX1-215ENST00000553186 M0R2N6 131 aa22.46■■□□□ 1.19
RBFOX1-215ENST00000553186 PPP6R2O75170 966 aa22.46■■□□□ 1.19
RBFOX1-215ENST00000553186 KLRC3Q07444 240 aa22.46■■□□□ 1.19
RBFOX1-215ENST00000553186 CCAR1Q8IX12 1150 aaKnown RBP22.46■■□□□ 1.19
RBFOX1-215ENST00000553186 GOLPH3LQ9H4A5 285 aa22.46■■□□□ 1.19
RBFOX1-215ENST00000553186 JMJD4Q9H9V9 463 aa22.46■■□□□ 1.19
RBFOX1-215ENST00000553186 SEC63Q9UGP8 760 aaKnown RBP22.46■■□□□ 1.19
RBFOX1-215ENST00000553186 SYNPO2Q9UMS6 1093 aa22.46■■□□□ 1.19
RBFOX1-215ENST00000553186 PCDHA4Q9UN74 947 aa22.46■■□□□ 1.19
RBFOX1-215ENST00000553186 CAP2P40123 477 aa22.46■■□□□ 1.19
RBFOX1-215ENST00000553186 CCDC96Q2M329 555 aa22.46■■□□□ 1.19
RBFOX1-215ENST00000553186 ADGRF4Q8IZF3 695 aa22.46■■□□□ 1.19
RBFOX1-215ENST00000553186 BLIDQ8IZY5 108 aa22.46■■□□□ 1.19
RBFOX1-215ENST00000553186 CCDC148Q8NFR7 591 aa22.46■■□□□ 1.19
RBFOX1-215ENST00000553186 PCDHB6Q9Y5E3 794 aa22.46■■□□□ 1.19
RBFOX1-215ENST00000553186 SBF1O95248 1867 aa22.45■■□□□ 1.19
RBFOX1-215ENST00000553186 MARCKSP29966 332 aaPredicted RBP22.45■■□□□ 1.18
RBFOX1-215ENST00000553186 SLC1A4P43007 532 aa22.45■■□□□ 1.18
RBFOX1-215ENST00000553186 GALNT17Q6IS24 598 aa22.45■■□□□ 1.18
RBFOX1-215ENST00000553186 LRSAM1Q6UWE0 723 aa22.45■■□□□ 1.18
RBFOX1-215ENST00000553186 DAGLBQ8NCG7 672 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms