RNA–Protein interactions for RNA: ENST00000549613.1

CALCOCO1-214, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 884 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-214ENST00000549613 RRP36Q96EU6 259 aaKnown RBP15.8■□□□□ 0.12
CALCOCO1-214ENST00000549613 L3MBTL3Q96JM7 780 aaPredicted RBP15.8■□□□□ 0.12
CALCOCO1-214ENST00000549613 ZNF341Q9BYN7 854 aa15.8■□□□□ 0.12
CALCOCO1-214ENST00000549613 FOXP1Q9H334 677 aaPredicted RBP15.8■□□□□ 0.12
CALCOCO1-214ENST00000549613 MYH6P13533 1939 aa15.8■□□□□ 0.12
CALCOCO1-214ENST00000549613 GLTPD2A6NH11 291 aa15.79■□□□□ 0.12
CALCOCO1-214ENST00000549613 CTNND1O60716 968 aaKnown RBP15.79■□□□□ 0.12
CALCOCO1-214ENST00000549613 MBD3O95983 291 aa15.79■□□□□ 0.12
CALCOCO1-214ENST00000549613 U2AF2P26368 475 aaKnown RBP eCLIP15.79■□□□□ 0.12
CALCOCO1-214ENST00000549613 CALML3P27482 149 aa15.79■□□□□ 0.12
CALCOCO1-214ENST00000549613 HIRAP54198 1017 aaPredicted RBP15.79■□□□□ 0.12
CALCOCO1-214ENST00000549613 CCDC96Q2M329 555 aa15.79■□□□□ 0.12
CALCOCO1-214ENST00000549613 USP50Q70EL3 339 aaPredicted RBP15.79■□□□□ 0.12
CALCOCO1-214ENST00000549613 USP48Q86UV5 1035 aa15.79■□□□□ 0.12
CALCOCO1-214ENST00000549613 SIAH1Q8IUQ4 282 aa15.79■□□□□ 0.12
CALCOCO1-214ENST00000549613 CDAN1Q8IWY9 1227 aa15.79■□□□□ 0.12
CALCOCO1-214ENST00000549613 JMYQ8N9B5 988 aa15.79■□□□□ 0.12
CALCOCO1-214ENST00000549613 DCPSQ96C86 337 aaKnown RBP15.79■□□□□ 0.12
CALCOCO1-214ENST00000549613 RIOX1Q9H6W3 641 aa15.79■□□□□ 0.12
CALCOCO1-214ENST00000549613 GJB4Q9NTQ9 266 aa15.79■□□□□ 0.12
CALCOCO1-214ENST00000549613 GGA3Q9NZ52 723 aa15.79■□□□□ 0.12
CALCOCO1-214ENST00000549613 SEC63Q9UGP8 760 aaKnown RBP15.79■□□□□ 0.12
CALCOCO1-214ENST00000549613 MYH4Q9Y623 1939 aa15.78■□□□□ 0.12
CALCOCO1-214ENST00000549613 ELP1O95163 1332 aa15.78■□□□□ 0.12
CALCOCO1-214ENST00000549613 PHF20L1A8MW92 1017 aa15.78■□□□□ 0.12
CALCOCO1-214ENST00000549613 F5H6K3 240 aa15.78■□□□□ 0.12
CALCOCO1-214ENST00000549613 UBE2Q2LH0YL09 131 aa15.78■□□□□ 0.12
CALCOCO1-214ENST00000549613 hCG_1984214I3L0E3 225 aa15.78■□□□□ 0.12
CALCOCO1-214ENST00000549613 FIBPO43427 364 aa15.78■□□□□ 0.12
CALCOCO1-214ENST00000549613 SLC1A4P43007 532 aa15.78■□□□□ 0.12
CALCOCO1-214ENST00000549613 JAG1P78504 1218 aa15.78■□□□□ 0.12
CALCOCO1-214ENST00000549613 KLRC3Q07444 240 aa15.78■□□□□ 0.12
CALCOCO1-214ENST00000549613 NBPF12Q5TAG4 269 aaPredicted RBP15.78■□□□□ 0.12
CALCOCO1-214ENST00000549613 GALNT17Q6IS24 598 aa15.78■□□□□ 0.12
CALCOCO1-214ENST00000549613 FAM173BQ6P4H8 233 aa15.78■□□□□ 0.12
CALCOCO1-214ENST00000549613 DIS3L2Q8IYB7 885 aaKnown RBP15.78■□□□□ 0.12
CALCOCO1-214ENST00000549613 ZNF713Q8N859 430 aaPredicted RBP15.78■□□□□ 0.12
CALCOCO1-214ENST00000549613 CCDC148Q8NFR7 591 aa15.78■□□□□ 0.12
CALCOCO1-214ENST00000549613 ZC3H15Q8WU90 426 aaKnown RBP15.78■□□□□ 0.12
CALCOCO1-214ENST00000549613 CCDC12Q8WUD4 166 aaPredicted RBP15.78■□□□□ 0.12
CALCOCO1-214ENST00000549613 GMCL1Q96IK5 515 aa15.78■□□□□ 0.12
CALCOCO1-214ENST00000549613 CHAMP1Q96JM3 812 aa15.78■□□□□ 0.12
CALCOCO1-214ENST00000549613 PHF20Q9BVI0 1012 aa15.78■□□□□ 0.12
CALCOCO1-214ENST00000549613 GOPCQ9HD26 462 aa15.78■□□□□ 0.12
CALCOCO1-214ENST00000549613 GPCPD1Q9NPB8 672 aa15.78■□□□□ 0.12
CALCOCO1-214ENST00000549613 TMX2Q9Y320 296 aa15.78■□□□□ 0.12
CALCOCO1-214ENST00000549613 DDX49Q9Y6V7 483 aaKnown RBP15.78■□□□□ 0.12
CALCOCO1-214ENST00000549613 FRMPD2Q68DX3 1309 aaPredicted RBP15.77■□□□□ 0.12
CALCOCO1-214ENST00000549613 hCG_1642624A0A1W2PR95 340 aa15.77■□□□□ 0.12
CALCOCO1-214ENST00000549613 IQCA1LA6NCM1 817 aa15.77■□□□□ 0.12
CALCOCO1-214ENST00000549613 CYTH3O43739 400 aa15.77■□□□□ 0.12
CALCOCO1-214ENST00000549613 KRT2P35908 639 aa15.77■□□□□ 0.12
CALCOCO1-214ENST00000549613 NLRP5P59047 1200 aa15.77■□□□□ 0.12
CALCOCO1-214ENST00000549613 MYSM1Q5VVJ2 828 aa15.77■□□□□ 0.12
CALCOCO1-214ENST00000549613 KLRG1Q96E93 195 aa15.77■□□□□ 0.12
CALCOCO1-214ENST00000549613 SPATA32Q96LK8 384 aa15.77■□□□□ 0.12
CALCOCO1-214ENST00000549613 UBA5Q9GZZ9 404 aa15.77■□□□□ 0.12
CALCOCO1-214ENST00000549613 VAT1LQ9HCJ6 419 aa15.77■□□□□ 0.12
CALCOCO1-214ENST00000549613 VPS54Q9P1Q0 977 aa15.77■□□□□ 0.12
CALCOCO1-214ENST00000549613 TFIP11Q9UBB9 837 aaKnown RBP15.77■□□□□ 0.12
CALCOCO1-214ENST00000549613 KCNJ14Q9UNX9 436 aa15.77■□□□□ 0.12
CALCOCO1-214ENST00000549613 TCHHQ07283 1943 aa15.76■□□□□ 0.11
CALCOCO1-214ENST00000549613 RAD21O60216 631 aa15.76■□□□□ 0.11
CALCOCO1-214ENST00000549613 UBE2HP62256 183 aa15.76■□□□□ 0.11
CALCOCO1-214ENST00000549613 SHROOM1Q2M3G4 852 aaPredicted RBP15.76■□□□□ 0.11
CALCOCO1-214ENST00000549613 KLHL40Q2TBA0 621 aa15.76■□□□□ 0.11
CALCOCO1-214ENST00000549613 SULF1Q8IWU6 871 aa15.76■□□□□ 0.11
CALCOCO1-214ENST00000549613 PIBF1Q8WXW3 757 aa15.76■□□□□ 0.11
CALCOCO1-214ENST00000549613 RTEL1Q9NZ71 1219 aa15.76■□□□□ 0.11
CALCOCO1-214ENST00000549613 ZNF112Q9UJU3 913 aa15.76■□□□□ 0.11
CALCOCO1-214ENST00000549613 RCOR1Q9UKL0 485 aa15.76■□□□□ 0.11
CALCOCO1-214ENST00000549613 SCAF8Q9UPN6 1271 aaKnown RBP15.76■□□□□ 0.11
CALCOCO1-214ENST00000549613 GOLGA6L4A6NEF3 574 aa15.75■□□□□ 0.11
CALCOCO1-214ENST00000549613 BTBD18B2RXH4 712 aa15.75■□□□□ 0.11
CALCOCO1-214ENST00000549613 KIF28PB7ZC32 967 aa15.75■□□□□ 0.11
CALCOCO1-214ENST00000549613 NDUFB10O96000 172 aa15.75■□□□□ 0.11
CALCOCO1-214ENST00000549613 BMP3P12645 472 aa15.75■□□□□ 0.11
CALCOCO1-214ENST00000549613 EPHX2P34913 555 aa15.75■□□□□ 0.11
CALCOCO1-214ENST00000549613 SLC35G1Q2M3R5 365 aa15.75■□□□□ 0.11
CALCOCO1-214ENST00000549613 NOSTRINQ8IVI9 506 aa15.75■□□□□ 0.11
CALCOCO1-214ENST00000549613 LEO1Q8WVC0 666 aaPredicted RBP15.75■□□□□ 0.11
CALCOCO1-214ENST00000549613 PIGSQ96S52 555 aa15.75■□□□□ 0.11
CALCOCO1-214ENST00000549613 GDPD2Q9HCC8 539 aa15.75■□□□□ 0.11
CALCOCO1-214ENST00000549613 BARHL2Q9NY43 387 aa15.75■□□□□ 0.11
CALCOCO1-214ENST00000549613 ISY1Q9ULR0 285 aaKnown RBP15.75■□□□□ 0.11
CALCOCO1-214ENST00000549613 PNMA6FA0A0J9YX94 578 aa15.74■□□□□ 0.11
CALCOCO1-214ENST00000549613 A0A1W2PRG0 241 aa15.74■□□□□ 0.11
CALCOCO1-214ENST00000549613 TOMM70O94826 608 aa15.74■□□□□ 0.11
CALCOCO1-214ENST00000549613 RILPL1Q5EBL4 403 aa15.74■□□□□ 0.11
CALCOCO1-214ENST00000549613 KCTD1Q719H9 257 aa15.74■□□□□ 0.11
CALCOCO1-214ENST00000549613 HEATR3Q7Z4Q2 680 aa15.74■□□□□ 0.11
CALCOCO1-214ENST00000549613 ADGRF4Q8IZF3 695 aa15.74■□□□□ 0.11
CALCOCO1-214ENST00000549613 USP28Q96RU2 1077 aa15.74■□□□□ 0.11
CALCOCO1-214ENST00000549613 VCPKMTQ9H867 229 aa15.74■□□□□ 0.11
CALCOCO1-214ENST00000549613 AS3MTQ9HBK9 375 aa15.74■□□□□ 0.11
CALCOCO1-214ENST00000549613 POLR3EQ9NVU0 708 aa15.74■□□□□ 0.11
CALCOCO1-214ENST00000549613 NOL7Q9UMY1 257 aaKnown RBP15.74■□□□□ 0.11
CALCOCO1-214ENST00000549613 YEATS4O95619 227 aa15.73■□□□□ 0.11
CALCOCO1-214ENST00000549613 GNA11P29992 359 aa15.73■□□□□ 0.11
CALCOCO1-214ENST00000549613 TRAF1Q13077 416 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms