RNA–Protein interactions for RNA: ENST00000539168.1

CDH5-202, Transcript of cadherin 5, humanhuman

TSL 2 BASIC

Gene CDH5, Length 1,672 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-202ENST00000539168 BARHL2Q9NY43 387 aa23.35■■□□□ 1.33
CDH5-202ENST00000539168 PCDHA7Q9UN72 937 aa23.35■■□□□ 1.33
CDH5-202ENST00000539168 MTMR7Q9Y216 660 aa23.35■■□□□ 1.33
CDH5-202ENST00000539168 CNTNAP1P78357 1384 aa23.35■■□□□ 1.33
CDH5-202ENST00000539168 hCG_1642624A0A1W2PR95 340 aa23.35■■□□□ 1.33
CDH5-202ENST00000539168 USP17L5A8MUK1 530 aa23.35■■□□□ 1.33
CDH5-202ENST00000539168 CYTH3O43739 400 aa23.35■■□□□ 1.33
CDH5-202ENST00000539168 TRAPPC10P48553 1259 aa23.35■■□□□ 1.33
CDH5-202ENST00000539168 ICA1Q05084 483 aa23.35■■□□□ 1.33
CDH5-202ENST00000539168 ZNF543Q08ER8 600 aa23.35■■□□□ 1.33
CDH5-202ENST00000539168 CCAR1Q8IX12 1150 aaKnown RBP23.35■■□□□ 1.33
CDH5-202ENST00000539168 DAGLBQ8NCG7 672 aa23.35■■□□□ 1.33
CDH5-202ENST00000539168 MYH4Q9Y623 1939 aa23.34■■□□□ 1.33
CDH5-202ENST00000539168 MRPS27Q92552 414 aaKnown RBP23.34■■□□□ 1.33
CDH5-202ENST00000539168 GRPEL1Q9HAV7 217 aa23.34■■□□□ 1.33
CDH5-202ENST00000539168 CTAGE5O15320 804 aa23.33■■□□□ 1.33
CDH5-202ENST00000539168 GOLGA8HP0CJ92 632 aa23.33■■□□□ 1.33
CDH5-202ENST00000539168 EEF2P13639 858 aaKnown RBP23.33■■□□□ 1.33
CDH5-202ENST00000539168 LIG1P18858 919 aa23.33■■□□□ 1.33
CDH5-202ENST00000539168 LMNB1P20700 586 aa23.33■■□□□ 1.33
CDH5-202ENST00000539168 NR5A1Q13285 461 aa23.33■■□□□ 1.33
CDH5-202ENST00000539168 PTPAQ15257 358 aa23.33■■□□□ 1.33
CDH5-202ENST00000539168 DACT1Q9NYF0 836 aa23.33■■□□□ 1.33
CDH5-202ENST00000539168 PCDHA4Q9UN74 947 aa23.33■■□□□ 1.33
CDH5-202ENST00000539168 GMPSP49915 693 aaPredicted RBP23.32■■□□□ 1.32
CDH5-202ENST00000539168 ATP2B2Q01814 1243 aa23.32■■□□□ 1.32
CDH5-202ENST00000539168 FAM160A1Q05DH4 1040 aa23.32■■□□□ 1.32
CDH5-202ENST00000539168 BLIDQ8IZY5 108 aa23.32■■□□□ 1.32
CDH5-202ENST00000539168 GMCL1P1Q8NEA9 526 aa23.32■■□□□ 1.32
CDH5-202ENST00000539168 FAM196BA6NMK8 535 aa23.32■■□□□ 1.32
CDH5-202ENST00000539168 GNA11P29992 359 aa23.32■■□□□ 1.32
CDH5-202ENST00000539168 MAP3K10Q02779 954 aa23.32■■□□□ 1.32
CDH5-202ENST00000539168 SEPT2Q15019 361 aa23.32■■□□□ 1.32
CDH5-202ENST00000539168 TPRNQ4KMQ1 711 aa23.32■■□□□ 1.32
CDH5-202ENST00000539168 MICALL2Q8IY33 904 aa23.32■■□□□ 1.32
CDH5-202ENST00000539168 OXER1Q8TDS5 423 aa23.32■■□□□ 1.32
CDH5-202ENST00000539168 TNFRSF25Q93038 417 aa23.32■■□□□ 1.32
CDH5-202ENST00000539168 TSPY26PQ9H489 355 aa23.32■■□□□ 1.32
CDH5-202ENST00000539168 CLSTN2Q9H4D0 955 aa23.32■■□□□ 1.32
CDH5-202ENST00000539168 CNOT7Q9UIV1 285 aaKnown RBP23.32■■□□□ 1.32
CDH5-202ENST00000539168 TRIM75PA6NK02 468 aa23.31■■□□□ 1.32
CDH5-202ENST00000539168 H7C1D1 291 aa23.31■■□□□ 1.32
CDH5-202ENST00000539168 CUTAO60888 179 aa23.31■■□□□ 1.32
CDH5-202ENST00000539168 CMA1P23946 247 aa23.31■■□□□ 1.32
CDH5-202ENST00000539168 NPY5RQ15761 445 aa23.31■■□□□ 1.32
CDH5-202ENST00000539168 MAP3K11Q16584 847 aa23.31■■□□□ 1.32
CDH5-202ENST00000539168 NBPF9Q3BBW0 867 aa23.31■■□□□ 1.32
CDH5-202ENST00000539168 WWC2Q6AWC2 1192 aa23.31■■□□□ 1.32
CDH5-202ENST00000539168 HEATR3Q7Z4Q2 680 aa23.31■■□□□ 1.32
CDH5-202ENST00000539168 GAS2L3Q86XJ1 694 aa23.31■■□□□ 1.32
CDH5-202ENST00000539168 FSIP1Q8NA03 581 aa23.31■■□□□ 1.32
CDH5-202ENST00000539168 SHISA4Q96DD7 197 aa23.31■■□□□ 1.32
CDH5-202ENST00000539168 TNMDQ9H2S6 317 aa23.31■■□□□ 1.32
CDH5-202ENST00000539168 ARHGEF10LQ9HCE6 1279 aa23.31■■□□□ 1.32
CDH5-202ENST00000539168 GINM1Q9NU53 330 aa23.31■■□□□ 1.32
CDH5-202ENST00000539168 GJA3Q9Y6H8 435 aa23.31■■□□□ 1.32
CDH5-202ENST00000539168 DICER1Q9UPY3 1922 aaKnown RBP23.3■■□□□ 1.32
CDH5-202ENST00000539168 ESYT2A0FGR8 921 aa23.3■■□□□ 1.32
CDH5-202ENST00000539168 STXBP3O00186 592 aa23.3■■□□□ 1.32
CDH5-202ENST00000539168 KINO60870 393 aaKnown RBP23.3■■□□□ 1.32
CDH5-202ENST00000539168 CCDC96Q2M329 555 aa23.3■■□□□ 1.32
CDH5-202ENST00000539168 PPP1R18Q6NYC8 613 aa23.3■■□□□ 1.32
CDH5-202ENST00000539168 ARHGAP27Q6ZUM4 889 aa23.3■■□□□ 1.32
CDH5-202ENST00000539168 PIBF1Q8WXW3 757 aa23.3■■□□□ 1.32
CDH5-202ENST00000539168 FHDC1Q9C0D6 1143 aaPredicted RBP23.3■■□□□ 1.32
CDH5-202ENST00000539168 C6orf50Q9HD87 102 aa23.3■■□□□ 1.32
CDH5-202ENST00000539168 GH2P01242 217 aa23.29■■□□□ 1.32
CDH5-202ENST00000539168 TOB1P50616 345 aaPredicted RBP23.29■■□□□ 1.32
CDH5-202ENST00000539168 SLC35G1Q2M3R5 365 aa23.29■■□□□ 1.32
CDH5-202ENST00000539168 SLFN13Q68D06 897 aa23.29■■□□□ 1.32
CDH5-202ENST00000539168 HOOK2Q96ED9 719 aa23.29■■□□□ 1.32
CDH5-202ENST00000539168 GMCL1Q96IK5 515 aa23.29■■□□□ 1.32
CDH5-202ENST00000539168 ZMYND12Q9H0C1 365 aa23.29■■□□□ 1.32
CDH5-202ENST00000539168 FRMPD2Q68DX3 1309 aaPredicted RBP23.29■■□□□ 1.32
CDH5-202ENST00000539168 NR1I2O75469 434 aa23.28■■□□□ 1.32
CDH5-202ENST00000539168 GDF11O95390 407 aa23.28■■□□□ 1.32
CDH5-202ENST00000539168 SLC1A4P43007 532 aa23.28■■□□□ 1.32
CDH5-202ENST00000539168 NAPAP54920 295 aa23.28■■□□□ 1.32
CDH5-202ENST00000539168 AXDND1Q5T1B0 1012 aaPredicted RBP23.28■■□□□ 1.32
CDH5-202ENST00000539168 GPC2Q8N158 579 aa23.28■■□□□ 1.32
CDH5-202ENST00000539168 KRI1Q8N9T8 703 aaKnown RBP23.28■■□□□ 1.32
CDH5-202ENST00000539168 SH2D4AQ9H788 454 aa23.28■■□□□ 1.32
CDH5-202ENST00000539168 BAZ2BQ9UIF8 2168 aaKnown RBP23.28■■□□□ 1.32
CDH5-202ENST00000539168 PNMA6FA0A0J9YX94 578 aa23.28■■□□□ 1.32
CDH5-202ENST00000539168 PRELPP51888 382 aa23.28■■□□□ 1.32
CDH5-202ENST00000539168 RBM43Q6ZSC3 357 aaKnown RBP23.28■■□□□ 1.32
CDH5-202ENST00000539168 CLEC10AQ8IUN9 316 aa23.28■■□□□ 1.32
CDH5-202ENST00000539168 GPKOWQ92917 476 aaPredicted RBP eCLIP23.28■■□□□ 1.32
CDH5-202ENST00000539168 TMEM39BQ9GZU3 492 aa23.28■■□□□ 1.32
CDH5-202ENST00000539168 PGAP2Q9UHJ9 254 aa23.28■■□□□ 1.32
CDH5-202ENST00000539168 KIF4BQ2VIQ3 1234 aa23.27■■□□□ 1.32
CDH5-202ENST00000539168 ZNF579Q8NAF0 562 aaKnown RBP23.27■■□□□ 1.32
CDH5-202ENST00000539168 ENGASEQ8NFI3 743 aa23.27■■□□□ 1.32
CDH5-202ENST00000539168 PIGSQ96S52 555 aa23.27■■□□□ 1.32
CDH5-202ENST00000539168 UBA5Q9GZZ9 404 aa23.27■■□□□ 1.32
CDH5-202ENST00000539168 GPCPD1Q9NPB8 672 aa23.27■■□□□ 1.32
CDH5-202ENST00000539168 CCDC194A0A1B0GVG4 234 aa23.26■■□□□ 1.31
CDH5-202ENST00000539168 RASA3Q14644 834 aa23.26■■□□□ 1.31
CDH5-202ENST00000539168 HOMER1Q86YM7 354 aa23.26■■□□□ 1.31
CDH5-202ENST00000539168 GLT8D2Q9H1C3 349 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms