RNA–Protein interactions for RNA: ENST00000525918.1

VPS26B-203, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-203ENST00000525918 FAM109BQ6ICB4 259 aaPredicted RBP12.87□□□□□ -0.35
VPS26B-203ENST00000525918 POTEHQ6S545 545 aa12.87□□□□□ -0.35
VPS26B-203ENST00000525918 SLC39A5Q6ZMH5 540 aa12.87□□□□□ -0.35
VPS26B-203ENST00000525918 CLEC10AQ8IUN9 316 aa12.87□□□□□ -0.35
VPS26B-203ENST00000525918 ATG4CQ96DT6 458 aa12.87□□□□□ -0.35
VPS26B-203ENST00000525918 DDRGK1Q96HY6 314 aa12.87□□□□□ -0.35
VPS26B-203ENST00000525918 MAML3Q96JK9 1138 aa12.87□□□□□ -0.35
VPS26B-203ENST00000525918 HAUS7Q99871 368 aa12.87□□□□□ -0.35
VPS26B-203ENST00000525918 KANSL2Q9H9L4 492 aa12.87□□□□□ -0.35
VPS26B-203ENST00000525918 ATP11BQ9Y2G3 1177 aa12.87□□□□□ -0.35
VPS26B-203ENST00000525918 LAMA2P24043 3122 aaKnown RBP12.86□□□□□ -0.35
VPS26B-203ENST00000525918 USP17L12C9JPN9 530 aa12.86□□□□□ -0.35
VPS26B-203ENST00000525918 USP17L21D6R901 530 aa12.86□□□□□ -0.35
VPS26B-203ENST00000525918 TMEM132BQ14DG7 1078 aa12.86□□□□□ -0.35
VPS26B-203ENST00000525918 UBE3CQ15386 1083 aa12.86□□□□□ -0.35
VPS26B-203ENST00000525918 SLFNL1Q499Z3 407 aa12.86□□□□□ -0.35
VPS26B-203ENST00000525918 PRAMEF19Q5SWL8 479 aa12.86□□□□□ -0.35
VPS26B-203ENST00000525918 ANO1Q5XXA6 986 aa12.86□□□□□ -0.35
VPS26B-203ENST00000525918 C16orf86Q6ZW13 317 aa12.86□□□□□ -0.35
VPS26B-203ENST00000525918 ADAMTS5Q9UNA0 930 aa12.86□□□□□ -0.35
VPS26B-203ENST00000525918 COG6Q9Y2V7 657 aa12.86□□□□□ -0.35
VPS26B-203ENST00000525918 A0A0C4DFX4 3053 aa12.86□□□□□ -0.35
VPS26B-203ENST00000525918 CYP2D7A0A087X1C5 515 aa12.85□□□□□ -0.35
VPS26B-203ENST00000525918 MYCNP04198 464 aaPredicted RBP12.85□□□□□ -0.35
VPS26B-203ENST00000525918 EEF2P13639 858 aaKnown RBP12.85□□□□□ -0.35
VPS26B-203ENST00000525918 SNX17Q15036 470 aa12.85□□□□□ -0.35
VPS26B-203ENST00000525918 C1orf53Q5VUE5 145 aa12.85□□□□□ -0.35
VPS26B-203ENST00000525918 ZSCAN25Q6NSZ9 544 aa12.85□□□□□ -0.35
VPS26B-203ENST00000525918 SAMD1Q6SPF0 538 aaPredicted RBP12.85□□□□□ -0.35
VPS26B-203ENST00000525918 RIOX2Q8IUF8 465 aa12.85□□□□□ -0.35
VPS26B-203ENST00000525918 GOPCQ9HD26 462 aa12.85□□□□□ -0.35
VPS26B-203ENST00000525918 NRBP1Q9UHY1 535 aa12.85□□□□□ -0.35
VPS26B-203ENST00000525918 SLC4A4Q9Y6R1 1079 aa12.85□□□□□ -0.35
VPS26B-203ENST00000525918 GREB1LQ9C091 1923 aaPredicted RBP12.84□□□□□ -0.35
VPS26B-203ENST00000525918 SMIM22K7EJ46 135 aa12.84□□□□□ -0.35
VPS26B-203ENST00000525918 ADCYAP1R1P41586 468 aa12.84□□□□□ -0.35
VPS26B-203ENST00000525918 KCTD2Q14681 263 aa12.84□□□□□ -0.35
VPS26B-203ENST00000525918 LRRC41Q15345 812 aa12.84□□□□□ -0.35
VPS26B-203ENST00000525918 CTR9Q6PD62 1173 aa12.84□□□□□ -0.35
VPS26B-203ENST00000525918 MMP19Q99542 508 aa12.84□□□□□ -0.35
VPS26B-203ENST00000525918 PRDM5Q9NQX1 630 aaPredicted RBP12.84□□□□□ -0.35
VPS26B-203ENST00000525918 DIS3Q9Y2L1 958 aaKnown RBP12.84□□□□□ -0.35
VPS26B-203ENST00000525918 MYH4Q9Y623 1939 aa12.84□□□□□ -0.35
VPS26B-203ENST00000525918 VWA5AO00534 786 aa12.83□□□□□ -0.36
VPS26B-203ENST00000525918 RARBP10826 455 aa12.83□□□□□ -0.36
VPS26B-203ENST00000525918 KCNA4P22459 653 aa12.83□□□□□ -0.36
VPS26B-203ENST00000525918 COPB2P35606 906 aa12.83□□□□□ -0.36
VPS26B-203ENST00000525918 STAT3P40763 770 aa12.83□□□□□ -0.36
VPS26B-203ENST00000525918 TRIM60Q495X7 471 aa12.83□□□□□ -0.36
VPS26B-203ENST00000525918 FAM47AQ5JRC9 791 aa12.83□□□□□ -0.36
VPS26B-203ENST00000525918 FERMT2Q96AC1 680 aa12.83□□□□□ -0.36
VPS26B-203ENST00000525918 TINF2Q9BSI4 451 aa12.83□□□□□ -0.36
VPS26B-203ENST00000525918 LRRCC1Q9C099 1032 aa12.83□□□□□ -0.36
VPS26B-203ENST00000525918 PUS7LQ9H0K6 701 aaKnown RBP12.83□□□□□ -0.36
VPS26B-203ENST00000525918 XPNPEP3Q9NQH7 507 aa12.83□□□□□ -0.36
VPS26B-203ENST00000525918 FBXO28Q9NVF7 368 aa12.83□□□□□ -0.36
VPS26B-203ENST00000525918 ARPP21Q9UBL0 812 aaPredicted RBP12.83□□□□□ -0.36
VPS26B-203ENST00000525918 PPP1R9AQ9ULJ8 1098 aa12.83□□□□□ -0.36
VPS26B-203ENST00000525918 UNC80Q8N2C7 3258 aa12.83□□□□□ -0.36
VPS26B-203ENST00000525918 RAD21O60216 631 aa12.82□□□□□ -0.36
VPS26B-203ENST00000525918 CHGBP05060 677 aa12.82□□□□□ -0.36
VPS26B-203ENST00000525918 PGK2P07205 417 aa12.82□□□□□ -0.36
VPS26B-203ENST00000525918 SHHQ15465 462 aa12.82□□□□□ -0.36
VPS26B-203ENST00000525918 ZNF792Q3KQV3 632 aa12.82□□□□□ -0.36
VPS26B-203ENST00000525918 ZNF697Q5TEC3 545 aa12.82□□□□□ -0.36
VPS26B-203ENST00000525918 RNF180Q86T96 592 aa12.82□□□□□ -0.36
VPS26B-203ENST00000525918 BADQ92934 168 aa12.82□□□□□ -0.36
VPS26B-203ENST00000525918 GUCD1Q96NT3 240 aa12.82□□□□□ -0.36
VPS26B-203ENST00000525918 PDLIM7Q9NR12 457 aa12.82□□□□□ -0.36
VPS26B-203ENST00000525918 ZNF214Q9UL59 606 aaPredicted RBP12.82□□□□□ -0.36
VPS26B-203ENST00000525918 PHF24Q9UPV7 400 aa12.82□□□□□ -0.36
VPS26B-203ENST00000525918 SBK1Q52WX2 424 aa12.81□□□□□ -0.36
VPS26B-203ENST00000525918 FAM83BQ5T0W9 1011 aa12.81□□□□□ -0.36
VPS26B-203ENST00000525918 DIEXFQ68CQ4 756 aaKnown RBP12.81□□□□□ -0.36
VPS26B-203ENST00000525918 REPS2Q8NFH8 660 aa12.81□□□□□ -0.36
VPS26B-203ENST00000525918 FAM161BQ96MY7 647 aa12.81□□□□□ -0.36
VPS26B-203ENST00000525918 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.81□□□□□ -0.36
VPS26B-203ENST00000525918 TACC3Q9Y6A5 838 aa12.81□□□□□ -0.36
VPS26B-203ENST00000525918 TRIM43BA6NCK2 446 aa12.8□□□□□ -0.36
VPS26B-203ENST00000525918 AKR1A1P14550 325 aa12.8□□□□□ -0.36
VPS26B-203ENST00000525918 TLE2Q04725 743 aa12.8□□□□□ -0.36
VPS26B-203ENST00000525918 C9orf50Q5SZB4 431 aa12.8□□□□□ -0.36
VPS26B-203ENST00000525918 GIMAP6Q6P9H5 292 aa12.8□□□□□ -0.36
VPS26B-203ENST00000525918 SH3RF1Q7Z6J0 888 aa12.8□□□□□ -0.36
VPS26B-203ENST00000525918 MSL3Q8N5Y2 521 aaKnown RBP12.8□□□□□ -0.36
VPS26B-203ENST00000525918 TRIM43Q96BQ3 446 aaPredicted RBP12.8□□□□□ -0.36
VPS26B-203ENST00000525918 STRBPQ96SI9 672 aaKnown RBP12.8□□□□□ -0.36
VPS26B-203ENST00000525918 SLF1Q9BQI6 1058 aa12.8□□□□□ -0.36
VPS26B-203ENST00000525918 MKNK2Q9HBH9 465 aa12.8□□□□□ -0.36
VPS26B-203ENST00000525918 NYAP2Q9P242 653 aa12.8□□□□□ -0.36
VPS26B-203ENST00000525918 CNPY2Q9Y2B0 182 aa12.8□□□□□ -0.36
VPS26B-203ENST00000525918 ROBO3Q96MS0 1386 aa12.8□□□□□ -0.36
VPS26B-203ENST00000525918 GSG1L2A8MUP6 293 aa12.79□□□□□ -0.36
VPS26B-203ENST00000525918 F5H6K3 240 aa12.79□□□□□ -0.36
VPS26B-203ENST00000525918 PGK1P00558 417 aa12.79□□□□□ -0.36
VPS26B-203ENST00000525918 CLTBP09497 229 aa12.79□□□□□ -0.36
VPS26B-203ENST00000525918 ZNF865P0CJ78 1059 aaPredicted RBP12.79□□□□□ -0.36
VPS26B-203ENST00000525918 TAL1P17542 331 aaPredicted RBP12.79□□□□□ -0.36
VPS26B-203ENST00000525918 RASA1P20936 1047 aa12.79□□□□□ -0.36
VPS26B-203ENST00000525918 SMAD3P84022 425 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms