RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 MLECQ14165 292 aa4.79□□□□□ -1.64
RNU4-60P-201ENST00000517239 INTS3Q68E01 1043 aaKnown RBP4.79□□□□□ -1.64
RNU4-60P-201ENST00000517239 PGM2L1Q6PCE3 622 aa4.79□□□□□ -1.64
RNU4-60P-201ENST00000517239 ADGRD1Q6QNK2 874 aa4.79□□□□□ -1.64
RNU4-60P-201ENST00000517239 MYLK4Q86YV6 388 aaPredicted RBP4.79□□□□□ -1.64
RNU4-60P-201ENST00000517239 NKAPQ8N5F7 415 aaKnown RBP4.79□□□□□ -1.64
RNU4-60P-201ENST00000517239 LRRN4CLQ8ND94 238 aa4.79□□□□□ -1.64
RNU4-60P-201ENST00000517239 CCT6BQ92526 530 aa4.79□□□□□ -1.64
RNU4-60P-201ENST00000517239 TRIM63Q969Q1 353 aa4.79□□□□□ -1.64
RNU4-60P-201ENST00000517239 KIFC2Q96AC6 838 aa4.79□□□□□ -1.64
RNU4-60P-201ENST00000517239 ATG4CQ96DT6 458 aa4.79□□□□□ -1.64
RNU4-60P-201ENST00000517239 HSPBAP1Q96EW2 488 aa4.79□□□□□ -1.64
RNU4-60P-201ENST00000517239 FAXDC2Q96IV6 333 aa4.79□□□□□ -1.64
RNU4-60P-201ENST00000517239 CDK5RAP3Q96JB5 506 aa4.79□□□□□ -1.64
RNU4-60P-201ENST00000517239 HHIPQ96QV1 700 aa4.79□□□□□ -1.64
RNU4-60P-201ENST00000517239 ZIC5Q96T25 663 aa4.79□□□□□ -1.64
RNU4-60P-201ENST00000517239 SLC9A7Q96T83 725 aa4.79□□□□□ -1.64
RNU4-60P-201ENST00000517239 SLC13A1Q9BZW2 595 aa4.79□□□□□ -1.64
RNU4-60P-201ENST00000517239 GRIP2Q9C0E4 1043 aa4.79□□□□□ -1.64
RNU4-60P-201ENST00000517239 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.79□□□□□ -1.64
RNU4-60P-201ENST00000517239 CSRNP2Q9H175 543 aa4.79□□□□□ -1.64
RNU4-60P-201ENST00000517239 ZNF576Q9H609 170 aa4.79□□□□□ -1.64
RNU4-60P-201ENST00000517239 SLC52A2Q9HAB3 445 aa4.79□□□□□ -1.64
RNU4-60P-201ENST00000517239 LGR6Q9HBX8 967 aa4.79□□□□□ -1.64
RNU4-60P-201ENST00000517239 CRTAC1Q9NQ79 661 aa4.79□□□□□ -1.64
RNU4-60P-201ENST00000517239 FAM86C1Q9NVL1 165 aa4.79□□□□□ -1.64
RNU4-60P-201ENST00000517239 FNIP2Q9P278 1114 aa4.79□□□□□ -1.64
RNU4-60P-201ENST00000517239 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.78□□□□□ -1.64
RNU4-60P-201ENST00000517239 SLC22A31A6NKX4 558 aa4.78□□□□□ -1.64
RNU4-60P-201ENST00000517239 ITGAVP06756 1048 aa4.78□□□□□ -1.64
RNU4-60P-201ENST00000517239 ZKSCAN1P17029 563 aaPredicted RBP4.78□□□□□ -1.64
RNU4-60P-201ENST00000517239 HSPA6P17066 643 aa4.78□□□□□ -1.64
RNU4-60P-201ENST00000517239 ARNTP27540 789 aa4.78□□□□□ -1.64
RNU4-60P-201ENST00000517239 IGFALSP35858 605 aa4.78□□□□□ -1.64
RNU4-60P-201ENST00000517239 CDK8P49336 464 aa4.78□□□□□ -1.64
RNU4-60P-201ENST00000517239 IL2P60568 153 aa4.78□□□□□ -1.64
RNU4-60P-201ENST00000517239 NUCB1Q02818 461 aa4.78□□□□□ -1.64
RNU4-60P-201ENST00000517239 TYRO3Q06418 890 aa4.78□□□□□ -1.64
RNU4-60P-201ENST00000517239 TBX2Q13207 712 aaPredicted RBP4.78□□□□□ -1.64
RNU4-60P-201ENST00000517239 ODF1Q14990 250 aa4.78□□□□□ -1.64
RNU4-60P-201ENST00000517239 TRIM61Q5EBN2 209 aa4.78□□□□□ -1.64
RNU4-60P-201ENST00000517239 C1QTNF12Q5T7M4 302 aa4.78□□□□□ -1.64
RNU4-60P-201ENST00000517239 COL13A1Q5TAT6 717 aaPredicted RBP4.78□□□□□ -1.64
RNU4-60P-201ENST00000517239 PIK3R6Q5UE93 754 aa4.78□□□□□ -1.64
RNU4-60P-201ENST00000517239 ARMC3Q5W041 872 aa4.78□□□□□ -1.64
RNU4-60P-201ENST00000517239 OVOS1Q6IE37 1185 aa4.78□□□□□ -1.64
RNU4-60P-201ENST00000517239 CYB5RLQ6IPT4 315 aa4.78□□□□□ -1.64
RNU4-60P-201ENST00000517239 LDHAL6AQ6ZMR3 332 aa4.78□□□□□ -1.64
RNU4-60P-201ENST00000517239 RSRC2Q7L4I2 434 aaKnown RBP4.78□□□□□ -1.64
RNU4-60P-201ENST00000517239 TRIM22Q8IYM9 498 aa4.78□□□□□ -1.64
RNU4-60P-201ENST00000517239 NXPE1Q8N323 547 aa4.78□□□□□ -1.64
RNU4-60P-201ENST00000517239 MPNDQ8N594 471 aa4.78□□□□□ -1.64
RNU4-60P-201ENST00000517239 STK35Q8TDR2 534 aa4.78□□□□□ -1.64
RNU4-60P-201ENST00000517239 OSBP2Q969R2 916 aa4.78□□□□□ -1.64
RNU4-60P-201ENST00000517239 NXPE3Q969Y0 559 aa4.78□□□□□ -1.64
RNU4-60P-201ENST00000517239 SCLYQ96I15 445 aa4.78□□□□□ -1.64
RNU4-60P-201ENST00000517239 WNK4Q96J92 1243 aa4.78□□□□□ -1.64
RNU4-60P-201ENST00000517239 MAGEB10Q96LZ2 347 aaPredicted RBP4.78□□□□□ -1.64
RNU4-60P-201ENST00000517239 TRERF1Q96PN7 1200 aa4.78□□□□□ -1.64
RNU4-60P-201ENST00000517239 VTA1Q9NP79 307 aa4.78□□□□□ -1.64
RNU4-60P-201ENST00000517239 C1orf112Q9NSG2 853 aa4.78□□□□□ -1.64
RNU4-60P-201ENST00000517239 TRMT13Q9NUP7 481 aaKnown RBP4.78□□□□□ -1.64
RNU4-60P-201ENST00000517239 SLC45A1Q9Y2W3 748 aa4.78□□□□□ -1.64
RNU4-60P-201ENST00000517239 GJA3Q9Y6H8 435 aa4.78□□□□□ -1.64
RNU4-60P-201ENST00000517239 SLC4A7Q9Y6M7 1214 aa4.78□□□□□ -1.64
RNU4-60P-201ENST00000517239 AP1G1O43747 822 aa4.77□□□□□ -1.65
RNU4-60P-201ENST00000517239 ORC4O43929 436 aa4.77□□□□□ -1.65
RNU4-60P-201ENST00000517239 EFCAB14O75071 495 aa4.77□□□□□ -1.65
RNU4-60P-201ENST00000517239 TP53P04637 393 aaPredicted RBP4.77□□□□□ -1.65
RNU4-60P-201ENST00000517239 C6orf222P0C671 652 aaPredicted RBP4.77□□□□□ -1.65
RNU4-60P-201ENST00000517239 MYBP10242 640 aa4.77□□□□□ -1.65
RNU4-60P-201ENST00000517239 NAT2P11245 290 aa4.77□□□□□ -1.65
RNU4-60P-201ENST00000517239 FGFR1P11362 822 aa4.77□□□□□ -1.65
RNU4-60P-201ENST00000517239 GRIK1P39086 918 aa4.77□□□□□ -1.65
RNU4-60P-201ENST00000517239 GRIA2P42262 883 aa4.77□□□□□ -1.65
RNU4-60P-201ENST00000517239 ALDH5A1P51649 535 aaPredicted RBP4.77□□□□□ -1.65
RNU4-60P-201ENST00000517239 HYAL2Q12891 473 aa4.77□□□□□ -1.65
RNU4-60P-201ENST00000517239 PDCD2Q16342 344 aaPredicted RBP4.77□□□□□ -1.65
RNU4-60P-201ENST00000517239 INAVAQ3KP66 663 aa4.77□□□□□ -1.65
RNU4-60P-201ENST00000517239 TMEM240Q5SV17 173 aa4.77□□□□□ -1.65
RNU4-60P-201ENST00000517239 DACT2Q5SW24 774 aa4.77□□□□□ -1.65
RNU4-60P-201ENST00000517239 IFIT1BQ5T764 474 aaKnown RBP4.77□□□□□ -1.65
RNU4-60P-201ENST00000517239 PDXDC1Q6P996 788 aa4.77□□□□□ -1.65
RNU4-60P-201ENST00000517239 MPRIPQ6WCQ1 1025 aa4.77□□□□□ -1.65
RNU4-60P-201ENST00000517239 NLRC3Q7RTR2 1065 aa4.77□□□□□ -1.65
RNU4-60P-201ENST00000517239 CATIPQ7Z7H3 387 aa4.77□□□□□ -1.65
RNU4-60P-201ENST00000517239 RASSF3Q86WH2 238 aa4.77□□□□□ -1.65
RNU4-60P-201ENST00000517239 SULF2Q8IWU5 870 aa4.77□□□□□ -1.65
RNU4-60P-201ENST00000517239 SPATA5Q8NB90 893 aa4.77□□□□□ -1.65
RNU4-60P-201ENST00000517239 GAL3ST3Q96A11 431 aa4.77□□□□□ -1.65
RNU4-60P-201ENST00000517239 AHCYL2Q96HN2 611 aaKnown RBP4.77□□□□□ -1.65
RNU4-60P-201ENST00000517239 TBATAQ96M53 351 aa4.77□□□□□ -1.65
RNU4-60P-201ENST00000517239 CCDC138Q96M89 665 aa4.77□□□□□ -1.65
RNU4-60P-201ENST00000517239 AIFM3Q96NN9 605 aa4.77□□□□□ -1.65
RNU4-60P-201ENST00000517239 LGR4Q9BXB1 951 aa4.77□□□□□ -1.65
RNU4-60P-201ENST00000517239 EMILIN2Q9BXX0 1053 aa4.77□□□□□ -1.65
RNU4-60P-201ENST00000517239 ALDH8A1Q9H2A2 487 aaPredicted RBP4.77□□□□□ -1.65
RNU4-60P-201ENST00000517239 GMIPQ9P107 970 aa4.77□□□□□ -1.65
RNU4-60P-201ENST00000517239 ZNF214Q9UL59 606 aaPredicted RBP4.77□□□□□ -1.65
RNU4-60P-201ENST00000517239 DNM3Q9UQ16 869 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms