RNA–Protein interactions for RNA: ENST00000503564.5

POLR2J3-207, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 875 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-207ENST00000503564 ROBO3Q96MS0 1386 aa17.02■□□□□ 0.32
POLR2J3-207ENST00000503564 EEF2P13639 858 aaKnown RBP17.02■□□□□ 0.32
POLR2J3-207ENST00000503564 FAM47AQ5JRC9 791 aa17.02■□□□□ 0.32
POLR2J3-207ENST00000503564 PRAMEF19Q5SWL8 479 aa17.02■□□□□ 0.32
POLR2J3-207ENST00000503564 SLC39A5Q6ZMH5 540 aa17.02■□□□□ 0.32
POLR2J3-207ENST00000503564 LBHD1Q9BQE6 289 aaPredicted RBP17.02■□□□□ 0.32
POLR2J3-207ENST00000503564 FBXO28Q9NVF7 368 aa17.02■□□□□ 0.32
POLR2J3-207ENST00000503564 KBTBD13C9JR72 458 aa17.01■□□□□ 0.31
POLR2J3-207ENST00000503564 POTEB2H3BUK9 544 aa17.01■□□□□ 0.31
POLR2J3-207ENST00000503564 SLC25A27O95847 323 aa17.01■□□□□ 0.31
POLR2J3-207ENST00000503564 LRRC41Q15345 812 aa17.01■□□□□ 0.31
POLR2J3-207ENST00000503564 FAM109BQ6ICB4 259 aaPredicted RBP17.01■□□□□ 0.31
POLR2J3-207ENST00000503564 CTR9Q6PD62 1173 aa17.01■□□□□ 0.31
POLR2J3-207ENST00000503564 RIOX2Q8IUF8 465 aa17.01■□□□□ 0.31
POLR2J3-207ENST00000503564 REPS2Q8NFH8 660 aa17.01■□□□□ 0.31
POLR2J3-207ENST00000503564 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.01■□□□□ 0.31
POLR2J3-207ENST00000503564 PUS7LQ9H0K6 701 aaKnown RBP17.01■□□□□ 0.31
POLR2J3-207ENST00000503564 KANSL2Q9H9L4 492 aa17.01■□□□□ 0.31
POLR2J3-207ENST00000503564 ATP11BQ9Y2G3 1177 aa17.01■□□□□ 0.31
POLR2J3-207ENST00000503564 SLC4A4Q9Y6R1 1079 aa17.01■□□□□ 0.31
POLR2J3-207ENST00000503564 MYH4Q9Y623 1939 aa17.01■□□□□ 0.31
POLR2J3-207ENST00000503564 FCER1AP12319 257 aa17■□□□□ 0.31
POLR2J3-207ENST00000503564 TRIM60Q495X7 471 aa17■□□□□ 0.31
POLR2J3-207ENST00000503564 SAMD1Q6SPF0 538 aaPredicted RBP17■□□□□ 0.31
POLR2J3-207ENST00000503564 AMOTL1Q8IY63 956 aa17■□□□□ 0.31
POLR2J3-207ENST00000503564 GUCD1Q96NT3 240 aa17■□□□□ 0.31
POLR2J3-207ENST00000503564 PRKAG2Q9UGJ0 569 aa17■□□□□ 0.31
POLR2J3-207ENST00000503564 NRBP1Q9UHY1 535 aa17■□□□□ 0.31
POLR2J3-207ENST00000503564 ZNF214Q9UL59 606 aaPredicted RBP17■□□□□ 0.31
POLR2J3-207ENST00000503564 PPP1R9AQ9ULJ8 1098 aa17■□□□□ 0.31
POLR2J3-207ENST00000503564 CUL9Q8IWT3 2517 aa17■□□□□ 0.31
POLR2J3-207ENST00000503564 VWA5AO00534 786 aa16.99■□□□□ 0.31
POLR2J3-207ENST00000503564 C1orf53Q5VUE5 145 aa16.99■□□□□ 0.31
POLR2J3-207ENST00000503564 DIEXFQ68CQ4 756 aaKnown RBP16.99■□□□□ 0.31
POLR2J3-207ENST00000503564 DDRGK1Q96HY6 314 aa16.99■□□□□ 0.31
POLR2J3-207ENST00000503564 MMP19Q99542 508 aa16.99■□□□□ 0.31
POLR2J3-207ENST00000503564 GOPCQ9HD26 462 aa16.99■□□□□ 0.31
POLR2J3-207ENST00000503564 PDLIM7Q9NR12 457 aa16.99■□□□□ 0.31
POLR2J3-207ENST00000503564 ARPP21Q9UBL0 812 aaPredicted RBP16.99■□□□□ 0.31
POLR2J3-207ENST00000503564 PGK2P07205 417 aa16.98■□□□□ 0.31
POLR2J3-207ENST00000503564 ADCYAP1R1P41586 468 aa16.98■□□□□ 0.31
POLR2J3-207ENST00000503564 ZNF792Q3KQV3 632 aa16.98■□□□□ 0.31
POLR2J3-207ENST00000503564 FAM83BQ5T0W9 1011 aa16.98■□□□□ 0.31
POLR2J3-207ENST00000503564 LRRCC1Q9C099 1032 aa16.98■□□□□ 0.31
POLR2J3-207ENST00000503564 CHMP4BQ9H444 224 aaKnown RBP16.98■□□□□ 0.31
POLR2J3-207ENST00000503564 PHF24Q9UPV7 400 aa16.98■□□□□ 0.31
POLR2J3-207ENST00000503564 DIS3Q9Y2L1 958 aaKnown RBP16.98■□□□□ 0.31
POLR2J3-207ENST00000503564 SMARCA5O60264 1052 aaPredicted RBP16.97■□□□□ 0.31
POLR2J3-207ENST00000503564 RASA1P20936 1047 aa16.97■□□□□ 0.31
POLR2J3-207ENST00000503564 STAT3P40763 770 aa16.97■□□□□ 0.31
POLR2J3-207ENST00000503564 SBK1Q52WX2 424 aa16.97■□□□□ 0.31
POLR2J3-207ENST00000503564 C9orf50Q5SZB4 431 aa16.97■□□□□ 0.31
POLR2J3-207ENST00000503564 ZSCAN25Q6NSZ9 544 aa16.97■□□□□ 0.31
POLR2J3-207ENST00000503564 SH3RF1Q7Z6J0 888 aa16.97■□□□□ 0.31
POLR2J3-207ENST00000503564 FERMT2Q96AC1 680 aa16.97■□□□□ 0.31
POLR2J3-207ENST00000503564 STRBPQ96SI9 672 aaKnown RBP16.97■□□□□ 0.31
POLR2J3-207ENST00000503564 TINF2Q9BSI4 451 aa16.97■□□□□ 0.31
POLR2J3-207ENST00000503564 PRDM5Q9NQX1 630 aaPredicted RBP16.97■□□□□ 0.31
POLR2J3-207ENST00000503564 MCM3APO60318 1980 aa16.97■□□□□ 0.31
POLR2J3-207ENST00000503564 TRIM43BA6NCK2 446 aa16.96■□□□□ 0.31
POLR2J3-207ENST00000503564 MYCNP04198 464 aaPredicted RBP16.96■□□□□ 0.31
POLR2J3-207ENST00000503564 ZNF865P0CJ78 1059 aaPredicted RBP16.96■□□□□ 0.31
POLR2J3-207ENST00000503564 RARBP10826 455 aa16.96■□□□□ 0.31
POLR2J3-207ENST00000503564 TAL1P17542 331 aaPredicted RBP16.96■□□□□ 0.31
POLR2J3-207ENST00000503564 COPB2P35606 906 aa16.96■□□□□ 0.31
POLR2J3-207ENST00000503564 KCTD2Q14681 263 aa16.96■□□□□ 0.31
POLR2J3-207ENST00000503564 SHHQ15465 462 aa16.96■□□□□ 0.31
POLR2J3-207ENST00000503564 C20orf194Q5TEA3 1177 aa16.96■□□□□ 0.31
POLR2J3-207ENST00000503564 BADQ92934 168 aa16.96■□□□□ 0.31
POLR2J3-207ENST00000503564 TRIM43Q96BQ3 446 aaPredicted RBP16.96■□□□□ 0.31
POLR2J3-207ENST00000503564 XPNPEP3Q9NQH7 507 aa16.96■□□□□ 0.31
POLR2J3-207ENST00000503564 GSG1L2A8MUP6 293 aa16.95■□□□□ 0.3
POLR2J3-207ENST00000503564 LENG1Q96BZ8 264 aaPredicted RBP16.95■□□□□ 0.3
POLR2J3-207ENST00000503564 NUP88Q99567 741 aaPredicted RBP16.95■□□□□ 0.3
POLR2J3-207ENST00000503564 SLF1Q9BQI6 1058 aa16.95■□□□□ 0.3
POLR2J3-207ENST00000503564 ECHDC1Q9NTX5 307 aa16.95■□□□□ 0.3
POLR2J3-207ENST00000503564 RCAN3Q9UKA8 241 aa16.95■□□□□ 0.3
POLR2J3-207ENST00000503564 IGKV6D-41A0A0C4DH26 115 aa16.94■□□□□ 0.3
POLR2J3-207ENST00000503564 RAD21O60216 631 aa16.94■□□□□ 0.3
POLR2J3-207ENST00000503564 ADAMTS4O75173 837 aa16.94■□□□□ 0.3
POLR2J3-207ENST00000503564 PGK1P00558 417 aa16.94■□□□□ 0.3
POLR2J3-207ENST00000503564 AKR1A1P14550 325 aa16.94■□□□□ 0.3
POLR2J3-207ENST00000503564 ITGB8P26012 769 aa16.94■□□□□ 0.3
POLR2J3-207ENST00000503564 TLE2Q04725 743 aa16.94■□□□□ 0.3
POLR2J3-207ENST00000503564 ZNF697Q5TEC3 545 aa16.94■□□□□ 0.3
POLR2J3-207ENST00000503564 GIMAP6Q6P9H5 292 aa16.94■□□□□ 0.3
POLR2J3-207ENST00000503564 KBTBD3Q8NAB2 608 aa16.94■□□□□ 0.3
POLR2J3-207ENST00000503564 OSBP2Q969R2 916 aa16.94■□□□□ 0.3
POLR2J3-207ENST00000503564 FAM161BQ96MY7 647 aa16.94■□□□□ 0.3
POLR2J3-207ENST00000503564 TEX13BQ9BXU2 312 aa16.94■□□□□ 0.3
POLR2J3-207ENST00000503564 EPB41L4AQ9HCS5 686 aaPredicted RBP16.94■□□□□ 0.3
POLR2J3-207ENST00000503564 NYAP2Q9P242 653 aa16.94■□□□□ 0.3
POLR2J3-207ENST00000503564 A0A1W2PQ45 241 aaPredicted RBP16.93■□□□□ 0.3
POLR2J3-207ENST00000503564 A0A1W2PQY0 241 aa16.93■□□□□ 0.3
POLR2J3-207ENST00000503564 NDUFB10O96000 172 aa16.93■□□□□ 0.3
POLR2J3-207ENST00000503564 RNF180Q86T96 592 aa16.93■□□□□ 0.3
POLR2J3-207ENST00000503564 APPBP2Q92624 585 aa16.93■□□□□ 0.3
POLR2J3-207ENST00000503564 RIPK3Q9Y572 518 aa16.93■□□□□ 0.3
POLR2J3-207ENST00000503564 DNAJC25-GNG10A0A024R161 153 aa16.92■□□□□ 0.3
POLR2J3-207ENST00000503564 F5H6K3 240 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms