RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 ARHGEF35A5YM69 484 aa17.92■□□□□ 0.46
HMGXB3-202ENST00000503427 KRT5P13647 590 aa17.92■□□□□ 0.46
HMGXB3-202ENST00000503427 DYMQ7RTS9 669 aa17.92■□□□□ 0.46
HMGXB3-202ENST00000503427 SYCE1Q8N0S2 351 aa17.92■□□□□ 0.46
HMGXB3-202ENST00000503427 STIM2Q9P246 746 aa17.92■□□□□ 0.46
HMGXB3-202ENST00000503427 TXNDC16Q9P2K2 825 aa17.92■□□□□ 0.46
HMGXB3-202ENST00000503427 DNM3Q9UQ16 869 aa17.92■□□□□ 0.46
HMGXB3-202ENST00000503427 SAR1BQ9Y6B6 198 aa17.92■□□□□ 0.46
HMGXB3-202ENST00000503427 CEP104O60308 925 aa17.92■□□□□ 0.46
HMGXB3-202ENST00000503427 LRMPQ12912 555 aa17.92■□□□□ 0.46
HMGXB3-202ENST00000503427 SFMBT2Q5VUG0 894 aa17.92■□□□□ 0.46
HMGXB3-202ENST00000503427 INTS8Q75QN2 995 aaKnown RBP17.92■□□□□ 0.46
HMGXB3-202ENST00000503427 PNMA1Q8ND90 353 aa17.92■□□□□ 0.46
HMGXB3-202ENST00000503427 MADDQ8WXG6 1647 aa17.92■□□□□ 0.46
HMGXB3-202ENST00000503427 BIRC3Q13489 604 aa17.92■□□□□ 0.46
HMGXB3-202ENST00000503427 GALNT17Q6IS24 598 aa17.92■□□□□ 0.46
HMGXB3-202ENST00000503427 UNC5CLQ8IV45 518 aa17.92■□□□□ 0.46
HMGXB3-202ENST00000503427 PKD2L1Q9P0L9 805 aa17.92■□□□□ 0.46
HMGXB3-202ENST00000503427 ERCC5P28715 1186 aaPredicted RBP17.92■□□□□ 0.46
HMGXB3-202ENST00000503427 IFIH1Q9BYX4 1025 aaKnown RBP17.92■□□□□ 0.46
HMGXB3-202ENST00000503427 EXOC7Q9UPT5 735 aa17.92■□□□□ 0.46
HMGXB3-202ENST00000503427 MED14O60244 1454 aa17.91■□□□□ 0.46
HMGXB3-202ENST00000503427 A0A1W2PQ27 194 aa17.91■□□□□ 0.46
HMGXB3-202ENST00000503427 A0A1W2PQ64 194 aa17.91■□□□□ 0.46
HMGXB3-202ENST00000503427 A0A1W2PQD8 194 aa17.91■□□□□ 0.46
HMGXB3-202ENST00000503427 CHMP2AO43633 222 aa17.91■□□□□ 0.46
HMGXB3-202ENST00000503427 INPP5BP32019 993 aa17.91■□□□□ 0.46
HMGXB3-202ENST00000503427 BTDP43251 543 aa17.91■□□□□ 0.46
HMGXB3-202ENST00000503427 POLA2Q14181 598 aa17.91■□□□□ 0.46
HMGXB3-202ENST00000503427 TLR7Q9NYK1 1049 aaKnown RBP17.91■□□□□ 0.46
HMGXB3-202ENST00000503427 SMCO2A6NFE2 343 aa17.91■□□□□ 0.46
HMGXB3-202ENST00000503427 BBOX1O75936 387 aa17.91■□□□□ 0.46
HMGXB3-202ENST00000503427 RPS6KA1Q15418 735 aa17.91■□□□□ 0.46
HMGXB3-202ENST00000503427 INF2Q27J81 1249 aa17.91■□□□□ 0.46
HMGXB3-202ENST00000503427 TRIM7Q9C029 511 aa17.91■□□□□ 0.46
HMGXB3-202ENST00000503427 NCAPH2Q6IBW4 605 aa17.91■□□□□ 0.46
HMGXB3-202ENST00000503427 GBP6Q6ZN66 633 aa17.91■□□□□ 0.46
HMGXB3-202ENST00000503427 MKRN1Q9UHC7 482 aaKnown RBP17.91■□□□□ 0.46
HMGXB3-202ENST00000503427 H7C1D1 291 aa17.91■□□□□ 0.46
HMGXB3-202ENST00000503427 PTPN12Q05209 780 aaKnown RBP17.91■□□□□ 0.46
HMGXB3-202ENST00000503427 CUL4AQ13619 759 aa17.91■□□□□ 0.46
HMGXB3-202ENST00000503427 ZNF365Q70YC5 407 aa17.91■□□□□ 0.46
HMGXB3-202ENST00000503427 SND1Q7KZF4 910 aaKnown RBP eCLIP17.91■□□□□ 0.46
HMGXB3-202ENST00000503427 VTI1AQ96AJ9 217 aa17.91■□□□□ 0.46
HMGXB3-202ENST00000503427 PPP2R2CQ9Y2T4 447 aa17.91■□□□□ 0.46
HMGXB3-202ENST00000503427 PABPN1LA6NDY0 278 aaKnown RBP17.9■□□□□ 0.46
HMGXB3-202ENST00000503427 NT5C3AQ9H0P0 336 aa17.9■□□□□ 0.46
HMGXB3-202ENST00000503427 EFCAB8A8MWE9 144 aa17.9■□□□□ 0.46
HMGXB3-202ENST00000503427 STX10O60499 249 aa17.9■□□□□ 0.46
HMGXB3-202ENST00000503427 MTMR3Q13615 1198 aa17.9■□□□□ 0.46
HMGXB3-202ENST00000503427 DPH6Q7L8W6 267 aa17.9■□□□□ 0.46
HMGXB3-202ENST00000503427 RSRC1Q96IZ7 334 aaKnown RBP17.9■□□□□ 0.46
HMGXB3-202ENST00000503427 SERPINA10Q9UK55 444 aa17.9■□□□□ 0.46
HMGXB3-202ENST00000503427 USP31Q70CQ4 1352 aa17.9■□□□□ 0.46
HMGXB3-202ENST00000503427 hCG_1642624A0A1W2PR95 340 aa17.9■□□□□ 0.46
HMGXB3-202ENST00000503427 GNA14O95837 355 aa17.9■□□□□ 0.46
HMGXB3-202ENST00000503427 ADD1P35611 737 aaKnown RBP17.9■□□□□ 0.46
HMGXB3-202ENST00000503427 LIN9Q5TKA1 542 aa17.9■□□□□ 0.46
HMGXB3-202ENST00000503427 RASEFQ8IZ41 740 aa17.9■□□□□ 0.46
HMGXB3-202ENST00000503427 BLIDQ8IZY5 108 aa17.9■□□□□ 0.46
HMGXB3-202ENST00000503427 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.9■□□□□ 0.46
HMGXB3-202ENST00000503427 KCNJ18B7U540 433 aa17.9■□□□□ 0.46
HMGXB3-202ENST00000503427 PDIA3P30101 505 aaKnown RBP17.9■□□□□ 0.46
HMGXB3-202ENST00000503427 KCNJ12Q14500 433 aa17.9■□□□□ 0.46
HMGXB3-202ENST00000503427 TRIM58Q8NG06 486 aa17.9■□□□□ 0.46
HMGXB3-202ENST00000503427 TDRD7Q8NHU6 1098 aaKnown RBP17.9■□□□□ 0.46
HMGXB3-202ENST00000503427 ANTXR1Q9H6X2 564 aa17.9■□□□□ 0.46
HMGXB3-202ENST00000503427 ZNF215Q9UL58 517 aaPredicted RBP17.9■□□□□ 0.46
HMGXB3-202ENST00000503427 PSDA5PKW4 1024 aaPredicted RBP17.89■□□□□ 0.46
HMGXB3-202ENST00000503427 CYP27B1O15528 508 aa17.89■□□□□ 0.46
HMGXB3-202ENST00000503427 ERCC6LQ2NKX8 1250 aa17.89■□□□□ 0.46
HMGXB3-202ENST00000503427 MAK16Q9BXY0 300 aaKnown RBP17.89■□□□□ 0.46
HMGXB3-202ENST00000503427 FBXO18Q8NFZ0 1043 aa17.89■□□□□ 0.45
HMGXB3-202ENST00000503427 CTTNBP2NLQ9P2B4 639 aa17.89■□□□□ 0.45
HMGXB3-202ENST00000503427 CFBP00751 764 aa17.89■□□□□ 0.45
HMGXB3-202ENST00000503427 SERPINB2P05120 415 aa17.89■□□□□ 0.45
HMGXB3-202ENST00000503427 ARHGAP25P42331 645 aa17.89■□□□□ 0.45
HMGXB3-202ENST00000503427 RRAGAQ7L523 313 aa17.89■□□□□ 0.45
HMGXB3-202ENST00000503427 KLHL7Q8IXQ5 586 aa17.89■□□□□ 0.45
HMGXB3-202ENST00000503427 RTEL1Q9NZ71 1219 aa17.89■□□□□ 0.45
HMGXB3-202ENST00000503427 CDC25BP30305 580 aa17.89■□□□□ 0.45
HMGXB3-202ENST00000503427 USH1GQ495M9 461 aa17.89■□□□□ 0.45
HMGXB3-202ENST00000503427 CPXCR1Q8N123 301 aa17.89■□□□□ 0.45
HMGXB3-202ENST00000503427 FAM207AQ9NSI2 230 aaPredicted RBP17.89■□□□□ 0.45
HMGXB3-202ENST00000503427 SSX2IPQ9Y2D8 614 aa17.89■□□□□ 0.45
HMGXB3-202ENST00000503427 CCDC169A6NNP5 214 aa17.88■□□□□ 0.45
HMGXB3-202ENST00000503427 DNM2P50570 870 aa17.88■□□□□ 0.45
HMGXB3-202ENST00000503427 MORC3Q14149 939 aa17.88■□□□□ 0.45
HMGXB3-202ENST00000503427 H7C1W4 665 aa17.88■□□□□ 0.45
HMGXB3-202ENST00000503427 SCG2P13521 617 aa17.88■□□□□ 0.45
HMGXB3-202ENST00000503427 NDUFA8P51970 172 aa17.88■□□□□ 0.45
HMGXB3-202ENST00000503427 SCRN1Q12765 414 aa17.88■□□□□ 0.45
HMGXB3-202ENST00000503427 CCDC14Q49A88 953 aa17.88■□□□□ 0.45
HMGXB3-202ENST00000503427 TYW1BQ6NUM6 668 aa17.88■□□□□ 0.45
HMGXB3-202ENST00000503427 CLEC4GQ6UXB4 293 aa17.88■□□□□ 0.45
HMGXB3-202ENST00000503427 DAAM2Q86T65 1068 aa17.88■□□□□ 0.45
HMGXB3-202ENST00000503427 FAM169AQ9Y6X4 670 aa17.88■□□□□ 0.45
HMGXB3-202ENST00000503427 LAMC1P11047 1609 aa17.88■□□□□ 0.45
HMGXB3-202ENST00000503427 ADCK5Q3MIX3 580 aa17.88■□□□□ 0.45
HMGXB3-202ENST00000503427 TAOK1Q7L7X3 1001 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms