RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 NFIXQ14938 502 aa8.35□□□□□ -1.07
PDGFC-203ENST00000502773 JAKMIP3Q5VZ66 844 aa8.35□□□□□ -1.07
PDGFC-203ENST00000502773 KRT27Q7Z3Y8 459 aa8.35□□□□□ -1.07
PDGFC-203ENST00000502773 GPHNQ9NQX3 736 aaPredicted RBP8.35□□□□□ -1.07
PDGFC-203ENST00000502773 FBXO2Q9UK22 296 aaPredicted RBP8.35□□□□□ -1.07
PDGFC-203ENST00000502773 NRAPQ86VF7 1730 aa8.35□□□□□ -1.07
PDGFC-203ENST00000502773 FAM205AQ6ZU69 1335 aa8.35□□□□□ -1.07
PDGFC-203ENST00000502773 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.35□□□□□ -1.07
PDGFC-203ENST00000502773 BTDP43251 543 aa8.35□□□□□ -1.07
PDGFC-203ENST00000502773 MFSD14BQ5SR56 506 aa8.35□□□□□ -1.07
PDGFC-203ENST00000502773 SPECC1LQ69YQ0 1117 aa8.35□□□□□ -1.07
PDGFC-203ENST00000502773 DHX40Q8IX18 779 aaKnown RBP8.35□□□□□ -1.07
PDGFC-203ENST00000502773 PDILTQ8N807 584 aa8.35□□□□□ -1.07
PDGFC-203ENST00000502773 CNKSR1Q969H4 720 aa8.35□□□□□ -1.07
PDGFC-203ENST00000502773 MYL10Q9BUA6 226 aa8.35□□□□□ -1.07
PDGFC-203ENST00000502773 KCNJ14Q9UNX9 436 aa8.35□□□□□ -1.07
PDGFC-203ENST00000502773 PCDHA5Q9Y5H7 936 aa8.35□□□□□ -1.07
PDGFC-203ENST00000502773 ROBO3Q96MS0 1386 aa8.35□□□□□ -1.07
PDGFC-203ENST00000502773 BIN1O00499 593 aa8.35□□□□□ -1.07
PDGFC-203ENST00000502773 PPEF1O14829 653 aaPredicted RBP8.35□□□□□ -1.07
PDGFC-203ENST00000502773 DYNLL1P63167 89 aaKnown RBP8.35□□□□□ -1.07
PDGFC-203ENST00000502773 SKIDA1Q1XH10 827 aa8.35□□□□□ -1.07
PDGFC-203ENST00000502773 FKBP15Q5T1M5 1219 aa8.35□□□□□ -1.07
PDGFC-203ENST00000502773 CNNM4Q6P4Q7 775 aa8.35□□□□□ -1.07
PDGFC-203ENST00000502773 C11orf57Q6ZUT1 292 aaPredicted RBP8.35□□□□□ -1.07
PDGFC-203ENST00000502773 PODNQ7Z5L7 613 aa8.35□□□□□ -1.07
PDGFC-203ENST00000502773 NBPF11Q86T75 865 aa8.35□□□□□ -1.07
PDGFC-203ENST00000502773 ERMNQ8TAM6 284 aa8.35□□□□□ -1.07
PDGFC-203ENST00000502773 TEKT1Q969V4 418 aa8.35□□□□□ -1.07
PDGFC-203ENST00000502773 DHX58Q96C10 678 aa8.35□□□□□ -1.07
PDGFC-203ENST00000502773 FEZ1Q99689 392 aa8.35□□□□□ -1.07
PDGFC-203ENST00000502773 MCM3P25205 808 aa8.34□□□□□ -1.07
PDGFC-203ENST00000502773 SHC4Q6S5L8 630 aa8.34□□□□□ -1.07
PDGFC-203ENST00000502773 ERO1AQ96HE7 468 aa8.34□□□□□ -1.07
PDGFC-203ENST00000502773 NBPF3Q9H094 633 aa8.34□□□□□ -1.07
PDGFC-203ENST00000502773 FAM217BQ9NTX9 383 aaPredicted RBP8.34□□□□□ -1.07
PDGFC-203ENST00000502773 TMEM51Q9NW97 253 aa8.34□□□□□ -1.07
PDGFC-203ENST00000502773 VPS54Q9P1Q0 977 aa8.34□□□□□ -1.07
PDGFC-203ENST00000502773 SERTAD1Q9UHV2 236 aa8.34□□□□□ -1.07
PDGFC-203ENST00000502773 KIF28PB7ZC32 967 aa8.34□□□□□ -1.07
PDGFC-203ENST00000502773 MPHOSPH10O00566 681 aaKnown RBP8.34□□□□□ -1.07
PDGFC-203ENST00000502773 DPP8Q6V1X1 898 aaPredicted RBP8.34□□□□□ -1.07
PDGFC-203ENST00000502773 HEATR3Q7Z4Q2 680 aa8.34□□□□□ -1.07
PDGFC-203ENST00000502773 FMNL3Q8IVF7 1028 aa8.34□□□□□ -1.07
PDGFC-203ENST00000502773 RETREG2Q8NC44 543 aa8.34□□□□□ -1.07
PDGFC-203ENST00000502773 TGFBRAP1Q8WUH2 860 aa8.34□□□□□ -1.07
PDGFC-203ENST00000502773 XPO4Q9C0E2 1151 aaKnown RBP8.34□□□□□ -1.07
PDGFC-203ENST00000502773 STK17AQ9UEE5 414 aa8.34□□□□□ -1.07
PDGFC-203ENST00000502773 HDAC9Q9UKV0 1011 aa8.34□□□□□ -1.07
PDGFC-203ENST00000502773 SYNPO2Q9UMS6 1093 aa8.34□□□□□ -1.07
PDGFC-203ENST00000502773 AKR1B15C9JRZ8 316 aaPredicted RBP8.34□□□□□ -1.07
PDGFC-203ENST00000502773 CHGBP05060 677 aa8.34□□□□□ -1.07
PDGFC-203ENST00000502773 LMOD1P29536 600 aaPredicted RBP8.34□□□□□ -1.07
PDGFC-203ENST00000502773 IQCEQ6IPM2 695 aa8.34□□□□□ -1.07
PDGFC-203ENST00000502773 HHIPL2Q6UWX4 724 aa8.34□□□□□ -1.07
PDGFC-203ENST00000502773 PIK3AP1Q6ZUJ8 805 aa8.34□□□□□ -1.07
PDGFC-203ENST00000502773 C16orf86Q6ZW13 317 aa8.34□□□□□ -1.07
PDGFC-203ENST00000502773 ILDR1Q86SU0 546 aaPredicted RBP8.34□□□□□ -1.07
PDGFC-203ENST00000502773 TMTC1Q8IUR5 882 aa8.34□□□□□ -1.07
PDGFC-203ENST00000502773 CUL5Q93034 780 aa8.34□□□□□ -1.07
PDGFC-203ENST00000502773 DHTKD1Q96HY7 919 aaPredicted RBP8.34□□□□□ -1.07
PDGFC-203ENST00000502773 NT5C3AQ9H0P0 336 aa8.34□□□□□ -1.07
PDGFC-203ENST00000502773 SH2D4AQ9H788 454 aa8.34□□□□□ -1.07
PDGFC-203ENST00000502773 QTRT2Q9H974 415 aaKnown RBP8.34□□□□□ -1.07
PDGFC-203ENST00000502773 SRP68Q9UHB9 627 aaKnown RBP8.34□□□□□ -1.07
PDGFC-203ENST00000502773 AFF2P51816 1311 aa8.34□□□□□ -1.07
PDGFC-203ENST00000502773 KLRF2D3W0D1 207 aa8.33□□□□□ -1.08
PDGFC-203ENST00000502773 KIF5CO60282 957 aa8.33□□□□□ -1.08
PDGFC-203ENST00000502773 PAK1Q13153 545 aa8.33□□□□□ -1.08
PDGFC-203ENST00000502773 KCNB1Q14721 858 aa8.33□□□□□ -1.08
PDGFC-203ENST00000502773 CRY2Q49AN0 593 aa8.33□□□□□ -1.08
PDGFC-203ENST00000502773 STK11IPQ8N1F8 1099 aa8.33□□□□□ -1.08
PDGFC-203ENST00000502773 ERCC4Q92889 916 aaPredicted RBP8.33□□□□□ -1.08
PDGFC-203ENST00000502773 MASTLQ96GX5 879 aa8.33□□□□□ -1.08
PDGFC-203ENST00000502773 CCSER1Q9C0I3 900 aa8.33□□□□□ -1.08
PDGFC-203ENST00000502773 ACBD3Q9H3P7 528 aa8.33□□□□□ -1.08
PDGFC-203ENST00000502773 EXOC1Q9NV70 894 aa8.33□□□□□ -1.08
PDGFC-203ENST00000502773 BARHL2Q9NY43 387 aa8.33□□□□□ -1.08
PDGFC-203ENST00000502773 RWDD2AQ9UIY3 292 aa8.33□□□□□ -1.08
PDGFC-203ENST00000502773 NFE2L3Q9Y4A8 694 aa8.33□□□□□ -1.08
PDGFC-203ENST00000502773 SYNRGQ9UMZ2 1314 aa8.33□□□□□ -1.08
PDGFC-203ENST00000502773 KDM3AQ9Y4C1 1321 aa8.33□□□□□ -1.08
PDGFC-203ENST00000502773 SLU7O95391 586 aaKnown RBP8.33□□□□□ -1.08
PDGFC-203ENST00000502773 FOSP01100 380 aaPredicted RBP8.33□□□□□ -1.08
PDGFC-203ENST00000502773 CCDC175P0C221 793 aa8.33□□□□□ -1.08
PDGFC-203ENST00000502773 PTGDRQ13258 359 aa8.33□□□□□ -1.08
PDGFC-203ENST00000502773 MORC3Q14149 939 aa8.33□□□□□ -1.08
PDGFC-203ENST00000502773 ZNF174Q15697 407 aa8.33□□□□□ -1.08
PDGFC-203ENST00000502773 DPCR1Q3MIW9 517 aa8.33□□□□□ -1.08
PDGFC-203ENST00000502773 KRT79Q5XKE5 535 aa8.33□□□□□ -1.08
PDGFC-203ENST00000502773 PRR5LQ6MZQ0 368 aa8.33□□□□□ -1.08
PDGFC-203ENST00000502773 NEK8Q86SG6 692 aa8.33□□□□□ -1.08
PDGFC-203ENST00000502773 FOXP4Q8IVH2 680 aaPredicted RBP8.33□□□□□ -1.08
PDGFC-203ENST00000502773 VSTM4Q8IW00 320 aa8.33□□□□□ -1.08
PDGFC-203ENST00000502773 FBXW7Q969H0 707 aa8.33□□□□□ -1.08
PDGFC-203ENST00000502773 CSRNP2Q9H175 543 aa8.33□□□□□ -1.08
PDGFC-203ENST00000502773 TTF2Q9UNY4 1162 aaKnown RBP8.33□□□□□ -1.08
PDGFC-203ENST00000502773 ATP6V0A2Q9Y487 856 aa8.33□□□□□ -1.08
PDGFC-203ENST00000502773 VWA3AA6NCI4 1184 aa8.33□□□□□ -1.08
PDGFC-203ENST00000502773 WDHD1O75717 1129 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms