RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 CTDSPL2Q05D32 466 aa19.09■□□□□ 0.65
HMGXB3-201ENST00000502717 PPP1R7Q15435 360 aa19.09■□□□□ 0.65
HMGXB3-201ENST00000502717 CLUL1Q15846 466 aa19.09■□□□□ 0.65
HMGXB3-201ENST00000502717 TSNAXIP1Q2TAA8 658 aa19.09■□□□□ 0.65
HMGXB3-201ENST00000502717 ALS2CLQ60I27 953 aa19.09■□□□□ 0.65
HMGXB3-201ENST00000502717 MRFAP1Q9Y605 127 aa19.09■□□□□ 0.65
HMGXB3-201ENST00000502717 LRCH2Q5VUJ6 765 aa19.09■□□□□ 0.65
HMGXB3-201ENST00000502717 TTC19Q6DKK2 380 aaPredicted RBP19.09■□□□□ 0.65
HMGXB3-201ENST00000502717 FOXP1Q9H334 677 aaPredicted RBP19.09■□□□□ 0.65
HMGXB3-201ENST00000502717 SLAIN2Q9P270 581 aa19.09■□□□□ 0.65
HMGXB3-201ENST00000502717 PNPLA6Q8IY17 1366 aa19.09■□□□□ 0.65
HMGXB3-201ENST00000502717 KCNQ3O43525 872 aa19.09■□□□□ 0.65
HMGXB3-201ENST00000502717 DESP17661 470 aa19.09■□□□□ 0.65
HMGXB3-201ENST00000502717 RPL13P26373 211 aaKnown RBP19.09■□□□□ 0.65
HMGXB3-201ENST00000502717 IFT88Q13099 833 aa19.09■□□□□ 0.65
HMGXB3-201ENST00000502717 NYAP1Q6ZVC0 841 aa19.09■□□□□ 0.65
HMGXB3-201ENST00000502717 ARHGEF25Q86VW2 580 aa19.09■□□□□ 0.65
HMGXB3-201ENST00000502717 ADGRB3O60242 1522 aa19.09■□□□□ 0.65
HMGXB3-201ENST00000502717 IRS4O14654 1257 aaPredicted RBP19.09■□□□□ 0.65
HMGXB3-201ENST00000502717 KLHL30Q0D2K2 578 aa19.09■□□□□ 0.65
HMGXB3-201ENST00000502717 LETM2Q2VYF4 491 aa19.09■□□□□ 0.65
HMGXB3-201ENST00000502717 SEL1L2Q5TEA6 688 aa19.09■□□□□ 0.65
HMGXB3-201ENST00000502717 TOGARAM2Q6ZUX3 1019 aa19.09■□□□□ 0.65
HMGXB3-201ENST00000502717 SYCE1Q8N0S2 351 aa19.09■□□□□ 0.65
HMGXB3-201ENST00000502717 HELBQ8NG08 1087 aaPredicted RBP19.09■□□□□ 0.65
HMGXB3-201ENST00000502717 ZNF532Q9HCE3 1301 aa19.09■□□□□ 0.65
HMGXB3-201ENST00000502717 MICAL1Q8TDZ2 1067 aa19.08■□□□□ 0.65
HMGXB3-201ENST00000502717 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.08■□□□□ 0.65
HMGXB3-201ENST00000502717 ODF2LQ9ULJ1 636 aa19.08■□□□□ 0.65
HMGXB3-201ENST00000502717 KCTD16Q68DU8 428 aa19.08■□□□□ 0.64
HMGXB3-201ENST00000502717 GPR108Q9NPR9 543 aa19.08■□□□□ 0.64
HMGXB3-201ENST00000502717 ZNF654Q8IZM8 581 aa19.08■□□□□ 0.64
HMGXB3-201ENST00000502717 FNBP4Q8N3X1 1017 aaPredicted RBP19.08■□□□□ 0.64
HMGXB3-201ENST00000502717 RETREG2Q8NC44 543 aa19.08■□□□□ 0.64
HMGXB3-201ENST00000502717 MPHOSPH6Q99547 160 aaKnown RBP19.08■□□□□ 0.64
HMGXB3-201ENST00000502717 ZMYND10O75800 440 aa19.08■□□□□ 0.64
HMGXB3-201ENST00000502717 MUM1L1Q5H9M0 696 aa19.08■□□□□ 0.64
HMGXB3-201ENST00000502717 ZNF496Q96IT1 587 aaPredicted RBP19.08■□□□□ 0.64
HMGXB3-201ENST00000502717 RAB17Q9H0T7 212 aa19.08■□□□□ 0.64
HMGXB3-201ENST00000502717 FAM184BQ9ULE4 1060 aa19.08■□□□□ 0.64
HMGXB3-201ENST00000502717 GSTO1P78417 241 aa19.07■□□□□ 0.64
HMGXB3-201ENST00000502717 DAAM2Q86T65 1068 aa19.07■□□□□ 0.64
HMGXB3-201ENST00000502717 JPH2Q9BR39 696 aaPredicted RBP19.07■□□□□ 0.64
HMGXB3-201ENST00000502717 GLI2P10070 1586 aa19.07■□□□□ 0.64
HMGXB3-201ENST00000502717 TRIM31Q9BZY9 425 aa19.07■□□□□ 0.64
HMGXB3-201ENST00000502717 MFAP3LO75121 409 aa19.07■□□□□ 0.64
HMGXB3-201ENST00000502717 EEF1GP26641 437 aaKnown RBP19.07■□□□□ 0.64
HMGXB3-201ENST00000502717 RPN1P04843 607 aaKnown RBP19.06■□□□□ 0.64
HMGXB3-201ENST00000502717 PUM3Q15397 648 aaKnown RBP19.06■□□□□ 0.64
HMGXB3-201ENST00000502717 CSRNP2Q9H175 543 aa19.06■□□□□ 0.64
HMGXB3-201ENST00000502717 ACTR5Q9H9F9 607 aaPredicted RBP19.06■□□□□ 0.64
HMGXB3-201ENST00000502717 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.06■□□□□ 0.64
HMGXB3-201ENST00000502717 SLC4A8Q2Y0W8 1093 aa19.06■□□□□ 0.64
HMGXB3-201ENST00000502717 PEX26Q7Z412 305 aa19.06■□□□□ 0.64
HMGXB3-201ENST00000502717 VSIG1Q86XK7 387 aa19.06■□□□□ 0.64
HMGXB3-201ENST00000502717 FANCBQ8NB91 859 aa19.06■□□□□ 0.64
HMGXB3-201ENST00000502717 SYMPKQ92797 1274 aaKnown RBP19.06■□□□□ 0.64
HMGXB3-201ENST00000502717 PSD3Q9NYI0 1048 aa19.06■□□□□ 0.64
HMGXB3-201ENST00000502717 NIP7Q9Y221 180 aaKnown RBP eCLIP19.06■□□□□ 0.64
HMGXB3-201ENST00000502717 SETBP1Q9Y6X0 1596 aa19.06■□□□□ 0.64
HMGXB3-201ENST00000502717 FLOT1O75955 427 aa19.06■□□□□ 0.64
HMGXB3-201ENST00000502717 NDUFA10O95299 355 aa19.06■□□□□ 0.64
HMGXB3-201ENST00000502717 GUCY2DQ02846 1103 aa19.06■□□□□ 0.64
HMGXB3-201ENST00000502717 APOA5Q6Q788 366 aa19.06■□□□□ 0.64
HMGXB3-201ENST00000502717 SMC6Q96SB8 1091 aa19.06■□□□□ 0.64
HMGXB3-201ENST00000502717 FAM169AQ9Y6X4 670 aa19.06■□□□□ 0.64
HMGXB3-201ENST00000502717 TMEM110-MUSTN1A8MSY1 372 aa19.06■□□□□ 0.64
HMGXB3-201ENST00000502717 SASH1O94885 1247 aa19.06■□□□□ 0.64
HMGXB3-201ENST00000502717 NCAPH2Q6IBW4 605 aa19.06■□□□□ 0.64
HMGXB3-201ENST00000502717 EYA3Q99504 573 aa19.06■□□□□ 0.64
HMGXB3-201ENST00000502717 ZC3H12CQ9C0D7 883 aaKnown RBP19.06■□□□□ 0.64
HMGXB3-201ENST00000502717 IQCGQ9H095 443 aaKnown RBP19.06■□□□□ 0.64
HMGXB3-201ENST00000502717 VCXQ9H320 206 aa19.06■□□□□ 0.64
HMGXB3-201ENST00000502717 HOMER2Q9NSB8 354 aa19.06■□□□□ 0.64
HMGXB3-201ENST00000502717 FEZ2Q9UHY8 353 aaPredicted RBP19.06■□□□□ 0.64
HMGXB3-201ENST00000502717 CETN3O15182 167 aa19.05■□□□□ 0.64
HMGXB3-201ENST00000502717 DENND2CQ68D51 928 aa19.05■□□□□ 0.64
HMGXB3-201ENST00000502717 ARMC9Q7Z3E5 817 aa19.05■□□□□ 0.64
HMGXB3-201ENST00000502717 STMN2Q93045 179 aa19.05■□□□□ 0.64
HMGXB3-201ENST00000502717 KAT6BQ8WYB5 2073 aa19.05■□□□□ 0.64
HMGXB3-201ENST00000502717 MED23Q9ULK4 1368 aa19.05■□□□□ 0.64
HMGXB3-201ENST00000502717 MXRA7P84157 204 aa19.05■□□□□ 0.64
HMGXB3-201ENST00000502717 EPC1Q9H2F5 836 aa19.05■□□□□ 0.64
HMGXB3-201ENST00000502717 SEMA3EO15041 775 aa19.05■□□□□ 0.64
HMGXB3-201ENST00000502717 ITGA6P23229 1130 aa19.05■□□□□ 0.64
HMGXB3-201ENST00000502717 PPP2R5EQ16537 467 aa19.05■□□□□ 0.64
HMGXB3-201ENST00000502717 RNF14Q9UBS8 474 aa19.05■□□□□ 0.64
HMGXB3-201ENST00000502717 MAST3O60307 1309 aa19.05■□□□□ 0.64
HMGXB3-201ENST00000502717 ANKRD65E5RJM6 399 aa19.05■□□□□ 0.64
HMGXB3-201ENST00000502717 FAM89AQ96GI7 184 aa19.05■□□□□ 0.64
HMGXB3-201ENST00000502717 RGS16O15492 202 aaPredicted RBP19.04■□□□□ 0.64
HMGXB3-201ENST00000502717 CABP7Q86V35 215 aa19.04■□□□□ 0.64
HMGXB3-201ENST00000502717 EHMT1Q9H9B1 1298 aa19.04■□□□□ 0.64
HMGXB3-201ENST00000502717 TMEM232C9JQI7 657 aa19.04■□□□□ 0.64
HMGXB3-201ENST00000502717 EMBQ6PCB8 327 aa19.04■□□□□ 0.64
HMGXB3-201ENST00000502717 HS2ST1Q7LGA3 356 aa19.04■□□□□ 0.64
HMGXB3-201ENST00000502717 CCDC170Q8IYT3 715 aa19.04■□□□□ 0.64
HMGXB3-201ENST00000502717 DNAI2Q9GZS0 605 aa19.04■□□□□ 0.64
HMGXB3-201ENST00000502717 NNTQ13423 1086 aa19.04■□□□□ 0.64
HMGXB3-201ENST00000502717 TRAPPC3LQ5T215 181 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms