RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 TTYH1Q9H313 450 aaPredicted RBP17.72■□□□□ 0.43
SEC61A1-207ENST00000498837 VCPKMTQ9H867 229 aa17.72■□□□□ 0.43
SEC61A1-207ENST00000498837 ARHGEF10LQ9HCE6 1279 aa17.72■□□□□ 0.43
SEC61A1-207ENST00000498837 SWAP70Q9UH65 585 aa17.72■□□□□ 0.43
SEC61A1-207ENST00000498837 CYP2D7A0A087X1C5 515 aa17.71■□□□□ 0.43
SEC61A1-207ENST00000498837 ITGB8P26012 769 aa17.71■□□□□ 0.43
SEC61A1-207ENST00000498837 ICA1Q05084 483 aa17.71■□□□□ 0.43
SEC61A1-207ENST00000498837 C1orf53Q5VUE5 145 aa17.71■□□□□ 0.43
SEC61A1-207ENST00000498837 MYLIPQ8WY64 445 aa17.71■□□□□ 0.43
SEC61A1-207ENST00000498837 BCL11AQ9H165 835 aa17.71■□□□□ 0.43
SEC61A1-207ENST00000498837 WDR46O15213 610 aaKnown RBP17.7■□□□□ 0.42
SEC61A1-207ENST00000498837 PGK2P07205 417 aa17.7■□□□□ 0.42
SEC61A1-207ENST00000498837 TAL1P17542 331 aaPredicted RBP17.7■□□□□ 0.42
SEC61A1-207ENST00000498837 MAFAQ8NHW3 353 aaPredicted RBP17.7■□□□□ 0.42
SEC61A1-207ENST00000498837 PANK1Q8TE04 598 aa17.7■□□□□ 0.42
SEC61A1-207ENST00000498837 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.7■□□□□ 0.42
SEC61A1-207ENST00000498837 XPNPEP3Q9NQH7 507 aa17.7■□□□□ 0.42
SEC61A1-207ENST00000498837 FBXO28Q9NVF7 368 aa17.7■□□□□ 0.42
SEC61A1-207ENST00000498837 ADAMTS5Q9UNA0 930 aa17.7■□□□□ 0.42
SEC61A1-207ENST00000498837 PHF24Q9UPV7 400 aa17.7■□□□□ 0.42
SEC61A1-207ENST00000498837 GREB1LQ9C091 1923 aaPredicted RBP17.7■□□□□ 0.42
SEC61A1-207ENST00000498837 MBD4O95243 580 aa17.69■□□□□ 0.42
SEC61A1-207ENST00000498837 SLC25A27O95847 323 aa17.69■□□□□ 0.42
SEC61A1-207ENST00000498837 PGK1P00558 417 aa17.69■□□□□ 0.42
SEC61A1-207ENST00000498837 CDK8P49336 464 aa17.69■□□□□ 0.42
SEC61A1-207ENST00000498837 SMAD3P84022 425 aaKnown RBP17.69■□□□□ 0.42
SEC61A1-207ENST00000498837 HSP90AB4PQ58FF6 505 aa17.69■□□□□ 0.42
SEC61A1-207ENST00000498837 MMP19Q99542 508 aa17.69■□□□□ 0.42
SEC61A1-207ENST00000498837 SH2D4AQ9H788 454 aa17.69■□□□□ 0.42
SEC61A1-207ENST00000498837 TTC28Q96AY4 2481 aa17.69■□□□□ 0.42
SEC61A1-207ENST00000498837 CHGBP05060 677 aa17.68■□□□□ 0.42
SEC61A1-207ENST00000498837 RARBP10826 455 aa17.68■□□□□ 0.42
SEC61A1-207ENST00000498837 EEF2P13639 858 aaKnown RBP17.68■□□□□ 0.42
SEC61A1-207ENST00000498837 EPHB4P54760 987 aa17.68■□□□□ 0.42
SEC61A1-207ENST00000498837 C12orf60Q5U649 245 aa17.68■□□□□ 0.42
SEC61A1-207ENST00000498837 CLASRPQ8N2M8 674 aaKnown RBP17.68■□□□□ 0.42
SEC61A1-207ENST00000498837 TINF2Q9BSI4 451 aa17.68■□□□□ 0.42
SEC61A1-207ENST00000498837 SPTBN5Q9NRC6 3674 aaKnown RBP17.68■□□□□ 0.42
SEC61A1-207ENST00000498837 ATP8A2Q9NTI2 1148 aa17.68■□□□□ 0.42
SEC61A1-207ENST00000498837 TACC3Q9Y6A5 838 aa17.68■□□□□ 0.42
SEC61A1-207ENST00000498837 USP17L12C9JPN9 530 aa17.67■□□□□ 0.42
SEC61A1-207ENST00000498837 USP17L21D6R901 530 aa17.67■□□□□ 0.42
SEC61A1-207ENST00000498837 CLTBP09497 229 aa17.67■□□□□ 0.42
SEC61A1-207ENST00000498837 IFIT2P09913 472 aaKnown RBP17.67■□□□□ 0.42
SEC61A1-207ENST00000498837 ADD2P35612 726 aa17.67■□□□□ 0.42
SEC61A1-207ENST00000498837 ZNF792Q3KQV3 632 aa17.67■□□□□ 0.42
SEC61A1-207ENST00000498837 RIOX2Q8IUF8 465 aa17.67■□□□□ 0.42
SEC61A1-207ENST00000498837 LENG1Q96BZ8 264 aaPredicted RBP17.67■□□□□ 0.42
SEC61A1-207ENST00000498837 KIF1BPQ96EK5 621 aa17.67■□□□□ 0.42
SEC61A1-207ENST00000498837 CCDC17Q96LX7 622 aa17.67■□□□□ 0.42
SEC61A1-207ENST00000498837 BOLA2Q9H3K6 86 aa17.67■□□□□ 0.42
SEC61A1-207ENST00000498837 PAG1Q9NWQ8 432 aa17.67■□□□□ 0.42
SEC61A1-207ENST00000498837 NRBP1Q9UHY1 535 aa17.67■□□□□ 0.42
SEC61A1-207ENST00000498837 A0A1W2PQ45 241 aaPredicted RBP17.66■□□□□ 0.42
SEC61A1-207ENST00000498837 A0A1W2PQY0 241 aa17.66■□□□□ 0.42
SEC61A1-207ENST00000498837 VWA5AO00534 786 aa17.66■□□□□ 0.42
SEC61A1-207ENST00000498837 ZNF865P0CJ78 1059 aaPredicted RBP17.66■□□□□ 0.42
SEC61A1-207ENST00000498837 STAT3P40763 770 aa17.66■□□□□ 0.42
SEC61A1-207ENST00000498837 C16orf86Q6ZW13 317 aa17.66■□□□□ 0.42
SEC61A1-207ENST00000498837 RNF180Q86T96 592 aa17.66■□□□□ 0.42
SEC61A1-207ENST00000498837 DIS3Q9Y2L1 958 aaKnown RBP17.66■□□□□ 0.42
SEC61A1-207ENST00000498837 GBF1Q92538 1859 aa17.65■□□□□ 0.42
SEC61A1-207ENST00000498837 KIAA0355O15063 1070 aa17.65■□□□□ 0.42
SEC61A1-207ENST00000498837 RAD21O60216 631 aa17.65■□□□□ 0.42
SEC61A1-207ENST00000498837 PQBP1O60828 265 aaKnown RBP17.65■□□□□ 0.42
SEC61A1-207ENST00000498837 HNRNPUQ00839 825 aaKnown RBP eCLIP17.65■□□□□ 0.42
SEC61A1-207ENST00000498837 KCTD2Q14681 263 aa17.65■□□□□ 0.42
SEC61A1-207ENST00000498837 FAM83BQ5T0W9 1011 aa17.65■□□□□ 0.42
SEC61A1-207ENST00000498837 SIRT2Q8IXJ6 389 aa17.65■□□□□ 0.42
SEC61A1-207ENST00000498837 REPS2Q8NFH8 660 aa17.65■□□□□ 0.42
SEC61A1-207ENST00000498837 RNPC3Q96LT9 517 aaKnown RBP17.65■□□□□ 0.42
SEC61A1-207ENST00000498837 ZNF214Q9UL59 606 aaPredicted RBP17.65■□□□□ 0.42
SEC61A1-207ENST00000498837 PPP1R9AQ9ULJ8 1098 aa17.65■□□□□ 0.42
SEC61A1-207ENST00000498837 ADAMTS4O75173 837 aa17.64■□□□□ 0.41
SEC61A1-207ENST00000498837 FOSL2P15408 326 aa17.64■□□□□ 0.41
SEC61A1-207ENST00000498837 RAG1P15918 1043 aa17.64■□□□□ 0.41
SEC61A1-207ENST00000498837 KANSL2Q9H9L4 492 aa17.64■□□□□ 0.41
SEC61A1-207ENST00000498837 AKR1A1P14550 325 aa17.63■□□□□ 0.41
SEC61A1-207ENST00000498837 FAAP100Q0VG06 881 aa17.63■□□□□ 0.41
SEC61A1-207ENST00000498837 CTR9Q6PD62 1173 aa17.63■□□□□ 0.41
SEC61A1-207ENST00000498837 AMOTL1Q8IY63 956 aa17.63■□□□□ 0.41
SEC61A1-207ENST00000498837 NUP88Q99567 741 aaPredicted RBP17.63■□□□□ 0.41
SEC61A1-207ENST00000498837 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.63■□□□□ 0.41
SEC61A1-207ENST00000498837 GOPCQ9HD26 462 aa17.63■□□□□ 0.41
SEC61A1-207ENST00000498837 TMEM39AQ9NV64 488 aa17.63■□□□□ 0.41
SEC61A1-207ENST00000498837 SLC4A4Q9Y6R1 1079 aa17.63■□□□□ 0.41
SEC61A1-207ENST00000498837 ROBO3Q96MS0 1386 aa17.63■□□□□ 0.41
SEC61A1-207ENST00000498837 ATP5JP18859 108 aa17.62■□□□□ 0.41
SEC61A1-207ENST00000498837 ACLYP53396 1101 aa17.62■□□□□ 0.41
SEC61A1-207ENST00000498837 FPGSQ05932 587 aa17.62■□□□□ 0.41
SEC61A1-207ENST00000498837 RPAP2Q8IXW5 612 aaPredicted RBP17.62■□□□□ 0.41
SEC61A1-207ENST00000498837 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.62■□□□□ 0.41
SEC61A1-207ENST00000498837 ZBED9Q6R2W3 1325 aa17.62■□□□□ 0.41
SEC61A1-207ENST00000498837 SNAI1O95863 264 aaPredicted RBP17.61■□□□□ 0.41
SEC61A1-207ENST00000498837 IRX5P78411 483 aaPredicted RBP17.61■□□□□ 0.41
SEC61A1-207ENST00000498837 GRIN2CQ14957 1233 aa17.61■□□□□ 0.41
SEC61A1-207ENST00000498837 ANKRD33Q7Z3H0 272 aa17.61■□□□□ 0.41
SEC61A1-207ENST00000498837 KLHDC9Q8NEP7 349 aa17.61■□□□□ 0.41
SEC61A1-207ENST00000498837 HAUS7Q99871 368 aa17.61■□□□□ 0.41
SEC61A1-207ENST00000498837 TSEN34Q9BSV6 310 aaKnown RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms