RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 PGK1P00558 417 aa16.89■□□□□ 0.29
VARS-227ENST00000489979 RLBP1P12271 317 aa16.89■□□□□ 0.29
VARS-227ENST00000489979 CEP85Q6P2H3 762 aa16.89■□□□□ 0.29
VARS-227ENST00000489979 ERC1Q8IUD2 1116 aa16.89■□□□□ 0.29
VARS-227ENST00000489979 MMP19Q99542 508 aa16.89■□□□□ 0.29
VARS-227ENST00000489979 IL1RAPL2Q9NP60 686 aa16.89■□□□□ 0.29
VARS-227ENST00000489979 NRBP1Q9UHY1 535 aa16.89■□□□□ 0.29
VARS-227ENST00000489979 TMX2Q9Y320 296 aa16.89■□□□□ 0.29
VARS-227ENST00000489979 BAZ2AQ9UIF9 1905 aaKnown RBP16.88■□□□□ 0.29
VARS-227ENST00000489979 TTC28Q96AY4 2481 aa16.88■□□□□ 0.29
VARS-227ENST00000489979 TCRBV5S4A2TA0A5A2 114 aa16.88■□□□□ 0.29
VARS-227ENST00000489979 KIAA0355O15063 1070 aa16.88■□□□□ 0.29
VARS-227ENST00000489979 WDR46O15213 610 aaKnown RBP16.88■□□□□ 0.29
VARS-227ENST00000489979 PQBP1O60828 265 aaKnown RBP16.88■□□□□ 0.29
VARS-227ENST00000489979 PGK2P07205 417 aa16.88■□□□□ 0.29
VARS-227ENST00000489979 RAG1P15918 1043 aa16.88■□□□□ 0.29
VARS-227ENST00000489979 TAL1P17542 331 aaPredicted RBP16.88■□□□□ 0.29
VARS-227ENST00000489979 RNF180Q86T96 592 aa16.88■□□□□ 0.29
VARS-227ENST00000489979 TINF2Q9BSI4 451 aa16.88■□□□□ 0.29
VARS-227ENST00000489979 SH2D4AQ9H788 454 aa16.88■□□□□ 0.29
VARS-227ENST00000489979 PRDM6Q9NQX0 595 aa16.88■□□□□ 0.29
VARS-227ENST00000489979 TMEM265A0A087WTH1 108 aa16.87■□□□□ 0.29
VARS-227ENST00000489979 A0A1W2PQ45 241 aaPredicted RBP16.87■□□□□ 0.29
VARS-227ENST00000489979 A0A1W2PQY0 241 aa16.87■□□□□ 0.29
VARS-227ENST00000489979 GOLIM4O00461 696 aa16.87■□□□□ 0.29
VARS-227ENST00000489979 DNAJC2Q99543 621 aaKnown RBP16.87■□□□□ 0.29
VARS-227ENST00000489979 ARMT1Q9H993 441 aa16.87■□□□□ 0.29
VARS-227ENST00000489979 TMEM39AQ9NV64 488 aa16.87■□□□□ 0.29
VARS-227ENST00000489979 FBXO28Q9NVF7 368 aa16.87■□□□□ 0.29
VARS-227ENST00000489979 ADAMTS5Q9UNA0 930 aa16.87■□□□□ 0.29
VARS-227ENST00000489979 CCER2I3L3R5 266 aa16.86■□□□□ 0.29
VARS-227ENST00000489979 SMIM22K7EJ46 135 aa16.86■□□□□ 0.29
VARS-227ENST00000489979 PRKAB2O43741 272 aa16.86■□□□□ 0.29
VARS-227ENST00000489979 ZNF865P0CJ78 1059 aaPredicted RBP16.86■□□□□ 0.29
VARS-227ENST00000489979 GRIN2CQ14957 1233 aa16.86■□□□□ 0.29
VARS-227ENST00000489979 ZNF792Q3KQV3 632 aa16.86■□□□□ 0.29
VARS-227ENST00000489979 RIOX2Q8IUF8 465 aa16.86■□□□□ 0.29
VARS-227ENST00000489979 RHPN1Q8TCX5 695 aa16.86■□□□□ 0.29
VARS-227ENST00000489979 SYMPKQ92797 1274 aaKnown RBP16.86■□□□□ 0.29
VARS-227ENST00000489979 LENG1Q96BZ8 264 aaPredicted RBP16.86■□□□□ 0.29
VARS-227ENST00000489979 DIS3Q9Y2L1 958 aaKnown RBP16.86■□□□□ 0.29
VARS-227ENST00000489979 AKR1A1P14550 325 aa16.85■□□□□ 0.29
VARS-227ENST00000489979 STAT3P40763 770 aa16.85■□□□□ 0.29
VARS-227ENST00000489979 CDK8P49336 464 aa16.85■□□□□ 0.29
VARS-227ENST00000489979 FPGSQ05932 587 aa16.85■□□□□ 0.29
VARS-227ENST00000489979 KCTD2Q14681 263 aa16.85■□□□□ 0.29
VARS-227ENST00000489979 SLFNL1Q499Z3 407 aa16.85■□□□□ 0.29
VARS-227ENST00000489979 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.85■□□□□ 0.29
VARS-227ENST00000489979 CCDC17Q96LX7 622 aa16.85■□□□□ 0.29
VARS-227ENST00000489979 ROBO3Q96MS0 1386 aa16.85■□□□□ 0.29
VARS-227ENST00000489979 CYP2D7A0A087X1C5 515 aa16.84■□□□□ 0.29
VARS-227ENST00000489979 VWA5AO00534 786 aa16.84■□□□□ 0.29
VARS-227ENST00000489979 ADAMTS4O75173 837 aa16.84■□□□□ 0.29
VARS-227ENST00000489979 MBD4O95243 580 aa16.84■□□□□ 0.29
VARS-227ENST00000489979 EEF2P13639 858 aaKnown RBP16.84■□□□□ 0.29
VARS-227ENST00000489979 FAAP100Q0VG06 881 aa16.84■□□□□ 0.29
VARS-227ENST00000489979 USP38Q8NB14 1042 aa16.84■□□□□ 0.29
VARS-227ENST00000489979 ATP8A2Q9NTI2 1148 aa16.84■□□□□ 0.29
VARS-227ENST00000489979 PPP1R9AQ9ULJ8 1098 aa16.84■□□□□ 0.29
VARS-227ENST00000489979 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.83■□□□□ 0.28
VARS-227ENST00000489979 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.83■□□□□ 0.28
VARS-227ENST00000489979 APBB1O00213 710 aa16.83■□□□□ 0.28
VARS-227ENST00000489979 DNAJB2P25686 324 aa16.83■□□□□ 0.28
VARS-227ENST00000489979 MUC3AQ02505 3323 aa16.83■□□□□ 0.28
VARS-227ENST00000489979 HSP90AB4PQ58FF6 505 aa16.83■□□□□ 0.28
VARS-227ENST00000489979 C12orf60Q5U649 245 aa16.83■□□□□ 0.28
VARS-227ENST00000489979 ANKRD33Q7Z3H0 272 aa16.83■□□□□ 0.28
VARS-227ENST00000489979 REPS2Q8NFH8 660 aa16.83■□□□□ 0.28
VARS-227ENST00000489979 TOX2Q96NM4 488 aa16.83■□□□□ 0.28
VARS-227ENST00000489979 TSEN34Q9BSV6 310 aaKnown RBP16.83■□□□□ 0.28
VARS-227ENST00000489979 BCL11AQ9H165 835 aa16.83■□□□□ 0.28
VARS-227ENST00000489979 STARD7Q9NQZ5 370 aa16.83■□□□□ 0.28
VARS-227ENST00000489979 ZNF214Q9UL59 606 aaPredicted RBP16.83■□□□□ 0.28
VARS-227ENST00000489979 CNPY2Q9Y2B0 182 aa16.83■□□□□ 0.28
VARS-227ENST00000489979 MYO9BQ13459 2157 aa16.82■□□□□ 0.28
VARS-227ENST00000489979 SYNRGQ9UMZ2 1314 aa16.82■□□□□ 0.28
VARS-227ENST00000489979 DCDC2CA8MYV0 355 aa16.82■□□□□ 0.28
VARS-227ENST00000489979 USP17L12C9JPN9 530 aa16.82■□□□□ 0.28
VARS-227ENST00000489979 USP17L21D6R901 530 aa16.82■□□□□ 0.28
VARS-227ENST00000489979 RAD21O60216 631 aa16.82■□□□□ 0.28
VARS-227ENST00000489979 IFIT2P09913 472 aaKnown RBP16.82■□□□□ 0.28
VARS-227ENST00000489979 ADD2P35612 726 aa16.82■□□□□ 0.28
VARS-227ENST00000489979 ACLYP53396 1101 aa16.82■□□□□ 0.28
VARS-227ENST00000489979 FAM83BQ5T0W9 1011 aa16.82■□□□□ 0.28
VARS-227ENST00000489979 C16orf86Q6ZW13 317 aa16.82■□□□□ 0.28
VARS-227ENST00000489979 CLASRPQ8N2M8 674 aaKnown RBP16.82■□□□□ 0.28
VARS-227ENST00000489979 NUP133Q8WUM0 1156 aa16.82■□□□□ 0.28
VARS-227ENST00000489979 ZNF576Q9H609 170 aa16.82■□□□□ 0.28
VARS-227ENST00000489979 KANSL2Q9H9L4 492 aa16.82■□□□□ 0.28
VARS-227ENST00000489979 GOPCQ9HD26 462 aa16.82■□□□□ 0.28
VARS-227ENST00000489979 TIMP1P01033 207 aa16.81■□□□□ 0.28
VARS-227ENST00000489979 COPB2P35606 906 aa16.81■□□□□ 0.28
VARS-227ENST00000489979 KCNA10Q16322 511 aa16.81■□□□□ 0.28
VARS-227ENST00000489979 TJAP1Q5JTD0 557 aa16.81■□□□□ 0.28
VARS-227ENST00000489979 AMOTL1Q8IY63 956 aa16.81■□□□□ 0.28
VARS-227ENST00000489979 KLHDC9Q8NEP7 349 aa16.81■□□□□ 0.28
VARS-227ENST00000489979 TIFAQ96CG3 184 aa16.81■□□□□ 0.28
VARS-227ENST00000489979 MOXD2PA6NHM9 499 aa16.8■□□□□ 0.28
VARS-227ENST00000489979 SNAI1O95863 264 aaPredicted RBP16.8■□□□□ 0.28
VARS-227ENST00000489979 CHGBP05060 677 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms