RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 PGAP2Q9UHJ9 254 aa21■□□□□ 0.95
COL16A1-215ENST00000488897 JAG1P78504 1218 aa21■□□□□ 0.95
COL16A1-215ENST00000488897 PPARAQ07869 468 aa21■□□□□ 0.95
COL16A1-215ENST00000488897 FAM151AQ8WW52 585 aa21■□□□□ 0.95
COL16A1-215ENST00000488897 KCND1Q9NSA2 647 aa21■□□□□ 0.95
COL16A1-215ENST00000488897 MYH1P12882 1939 aa21■□□□□ 0.95
COL16A1-215ENST00000488897 GNAT2P19087 354 aa20.99■□□□□ 0.95
COL16A1-215ENST00000488897 ANTXR2P58335 489 aa20.99■□□□□ 0.95
COL16A1-215ENST00000488897 ARID5BQ14865 1188 aa20.99■□□□□ 0.95
COL16A1-215ENST00000488897 C12orf60Q5U649 245 aa20.99■□□□□ 0.95
COL16A1-215ENST00000488897 CLEC10AQ8IUN9 316 aa20.99■□□□□ 0.95
COL16A1-215ENST00000488897 NACAP1Q9BZK3 213 aa20.99■□□□□ 0.95
COL16A1-215ENST00000488897 A0A087WWV3 80 aa20.99■□□□□ 0.95
COL16A1-215ENST00000488897 NCBP1Q09161 790 aaKnown RBP20.99■□□□□ 0.95
COL16A1-215ENST00000488897 PTPN14Q15678 1187 aa20.99■□□□□ 0.95
COL16A1-215ENST00000488897 FAM47AQ5JRC9 791 aa20.99■□□□□ 0.95
COL16A1-215ENST00000488897 CCZ1BP86790 482 aa20.98■□□□□ 0.95
COL16A1-215ENST00000488897 CCZ1P86791 482 aaPredicted RBP20.98■□□□□ 0.95
COL16A1-215ENST00000488897 TRDNQ13061 729 aa20.98■□□□□ 0.95
COL16A1-215ENST00000488897 DHX8Q14562 1220 aaKnown RBP20.98■□□□□ 0.95
COL16A1-215ENST00000488897 ANO1Q5XXA6 986 aa20.98■□□□□ 0.95
COL16A1-215ENST00000488897 ERCC4Q92889 916 aaPredicted RBP20.98■□□□□ 0.95
COL16A1-215ENST00000488897 GDF11O95390 407 aa20.98■□□□□ 0.95
COL16A1-215ENST00000488897 SLC3A2P08195 630 aaKnown RBP20.98■□□□□ 0.95
COL16A1-215ENST00000488897 TPM4P67936 248 aa20.98■□□□□ 0.95
COL16A1-215ENST00000488897 ZKSCAN3Q9BRR0 538 aa20.98■□□□□ 0.95
COL16A1-215ENST00000488897 NEDD4P46934 1319 aa20.98■□□□□ 0.95
COL16A1-215ENST00000488897 CMA1P23946 247 aa20.97■□□□□ 0.95
COL16A1-215ENST00000488897 KIF23Q02241 960 aaPredicted RBP20.97■□□□□ 0.95
COL16A1-215ENST00000488897 NYAP1Q6ZVC0 841 aa20.97■□□□□ 0.95
COL16A1-215ENST00000488897 NMT2O60551 498 aa20.97■□□□□ 0.95
COL16A1-215ENST00000488897 ZNF202O95125 648 aa20.97■□□□□ 0.95
COL16A1-215ENST00000488897 NLRP12P59046 1061 aa20.97■□□□□ 0.95
COL16A1-215ENST00000488897 CDCA5Q96FF9 252 aa20.97■□□□□ 0.95
COL16A1-215ENST00000488897 NAV1Q8NEY1 1877 aa20.97■□□□□ 0.95
COL16A1-215ENST00000488897 CBX1P83916 185 aa20.96■□□□□ 0.95
COL16A1-215ENST00000488897 CRACR2BQ8N4Y2 399 aaPredicted RBP20.96■□□□□ 0.95
COL16A1-215ENST00000488897 FEZ1Q99689 392 aa20.96■□□□□ 0.95
COL16A1-215ENST00000488897 KIF2AO00139 706 aaPredicted RBP20.96■□□□□ 0.95
COL16A1-215ENST00000488897 CDKL5O76039 1030 aa20.96■□□□□ 0.95
COL16A1-215ENST00000488897 DPCR1Q3MIW9 517 aa20.96■□□□□ 0.95
COL16A1-215ENST00000488897 ZNF592Q92610 1267 aa20.96■□□□□ 0.95
COL16A1-215ENST00000488897 ZKSCAN4Q969J2 545 aaPredicted RBP20.96■□□□□ 0.95
COL16A1-215ENST00000488897 B4E1Z4 1266 aa20.95■□□□□ 0.94
COL16A1-215ENST00000488897 ENTPD3O75355 529 aa20.95■□□□□ 0.94
COL16A1-215ENST00000488897 AXDND1Q5T1B0 1012 aaPredicted RBP20.95■□□□□ 0.94
COL16A1-215ENST00000488897 CCAR2Q8N163 923 aaKnown RBP20.95■□□□□ 0.94
COL16A1-215ENST00000488897 TIGD1Q96MW7 591 aa20.95■□□□□ 0.94
COL16A1-215ENST00000488897 ANGEL1Q9UNK9 670 aaKnown RBP20.95■□□□□ 0.94
COL16A1-215ENST00000488897 ZMYM6O95789 1325 aa20.95■□□□□ 0.94
COL16A1-215ENST00000488897 FOCADQ5VW36 1801 aa20.95■□□□□ 0.94
COL16A1-215ENST00000488897 USP27XA6NNY8 438 aa20.95■□□□□ 0.94
COL16A1-215ENST00000488897 SLC39A14Q15043 492 aa20.95■□□□□ 0.94
COL16A1-215ENST00000488897 NBPF11Q86T75 865 aa20.95■□□□□ 0.94
COL16A1-215ENST00000488897 LDHDQ86WU2 507 aa20.95■□□□□ 0.94
COL16A1-215ENST00000488897 APOBEC3FQ8IUX4 373 aaKnown RBP20.95■□□□□ 0.94
COL16A1-215ENST00000488897 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.95■□□□□ 0.94
COL16A1-215ENST00000488897 CGNQ9P2M7 1197 aaKnown RBP20.95■□□□□ 0.94
COL16A1-215ENST00000488897 SSC5DA1L4H1 1573 aa20.95■□□□□ 0.94
COL16A1-215ENST00000488897 SIPA1L1O43166 1804 aa20.94■□□□□ 0.94
COL16A1-215ENST00000488897 KIF28PB7ZC32 967 aa20.94■□□□□ 0.94
COL16A1-215ENST00000488897 INPP5BP32019 993 aa20.94■□□□□ 0.94
COL16A1-215ENST00000488897 TNNI2P48788 182 aa20.94■□□□□ 0.94
COL16A1-215ENST00000488897 CDK8P49336 464 aa20.94■□□□□ 0.94
COL16A1-215ENST00000488897 CPLX2Q6PUV4 134 aaKnown RBP20.94■□□□□ 0.94
COL16A1-215ENST00000488897 FAM83AQ86UY5 434 aa20.94■□□□□ 0.94
COL16A1-215ENST00000488897 CCDC150Q8NCX0 1101 aa20.94■□□□□ 0.94
COL16A1-215ENST00000488897 SERPINB13Q9UIV8 391 aa20.94■□□□□ 0.94
COL16A1-215ENST00000488897 ITGBL1O95965 494 aaPredicted RBP20.94■□□□□ 0.94
COL16A1-215ENST00000488897 TNFAIP1Q13829 316 aa20.94■□□□□ 0.94
COL16A1-215ENST00000488897 PI4KBQ9UBF8 816 aa20.94■□□□□ 0.94
COL16A1-215ENST00000488897 ARPP21Q9UBL0 812 aaPredicted RBP20.94■□□□□ 0.94
COL16A1-215ENST00000488897 RANBP6O60518 1105 aaKnown RBP20.93■□□□□ 0.94
COL16A1-215ENST00000488897 PFKFB1P16118 471 aa20.93■□□□□ 0.94
COL16A1-215ENST00000488897 HTRA3P83110 453 aa20.93■□□□□ 0.94
COL16A1-215ENST00000488897 TTLL12Q14166 644 aaPredicted RBP20.93■□□□□ 0.94
COL16A1-215ENST00000488897 ALX1Q15699 326 aa20.93■□□□□ 0.94
COL16A1-215ENST00000488897 RAB11FIP4Q86YS3 637 aa20.93■□□□□ 0.94
COL16A1-215ENST00000488897 JMYQ8N9B5 988 aa20.93■□□□□ 0.94
COL16A1-215ENST00000488897 ZC3H15Q8WU90 426 aaKnown RBP20.93■□□□□ 0.94
COL16A1-215ENST00000488897 SHMT1P34896 483 aa20.93■□□□□ 0.94
COL16A1-215ENST00000488897 METAP2P50579 478 aaKnown RBP eCLIP20.93■□□□□ 0.94
COL16A1-215ENST00000488897 CNKSR2Q8WXI2 1034 aa20.93■□□□□ 0.94
COL16A1-215ENST00000488897 ALG1Q9BT22 464 aa20.93■□□□□ 0.94
COL16A1-215ENST00000488897 UBE2Q2LH0YL09 131 aa20.92■□□□□ 0.94
COL16A1-215ENST00000488897 NRDCO43847 1150 aa20.92■□□□□ 0.94
COL16A1-215ENST00000488897 SMC2O95347 1197 aa20.92■□□□□ 0.94
COL16A1-215ENST00000488897 U2AF2P26368 475 aaKnown RBP eCLIP20.92■□□□□ 0.94
COL16A1-215ENST00000488897 UTP14CQ5TAP6 766 aaKnown RBP20.92■□□□□ 0.94
COL16A1-215ENST00000488897 CST9Q5W186 159 aa20.92■□□□□ 0.94
COL16A1-215ENST00000488897 KIF18AQ8NI77 898 aa20.92■□□□□ 0.94
COL16A1-215ENST00000488897 XPO4Q9C0E2 1151 aaKnown RBP20.92■□□□□ 0.94
COL16A1-215ENST00000488897 MKNK2Q9HBH9 465 aa20.92■□□□□ 0.94
COL16A1-215ENST00000488897 GJB4Q9NTQ9 266 aa20.92■□□□□ 0.94
COL16A1-215ENST00000488897 MPHOSPH10O00566 681 aaKnown RBP20.92■□□□□ 0.94
COL16A1-215ENST00000488897 PPP6R2O75170 966 aa20.92■□□□□ 0.94
COL16A1-215ENST00000488897 DDX60LQ5H9U9 1706 aaKnown RBP20.92■□□□□ 0.94
COL16A1-215ENST00000488897 CHADLQ6NUI6 762 aa20.92■□□□□ 0.94
COL16A1-215ENST00000488897 CYB5R4Q7L1T6 521 aa20.92■□□□□ 0.94
COL16A1-215ENST00000488897 IFNKQ9P0W0 207 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms