RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 ZNF503-AS2A6NEH8 195 aa6.43□□□□□ -1.38
VPS13A-211ENST00000484581 PDPK1O15530 556 aa6.43□□□□□ -1.38
VPS13A-211ENST00000484581 CHMP4BP1P59074 171 aa6.43□□□□□ -1.38
VPS13A-211ENST00000484581 INPP5AQ14642 412 aa6.43□□□□□ -1.38
VPS13A-211ENST00000484581 SFRP5Q5T4F7 317 aa6.43□□□□□ -1.38
VPS13A-211ENST00000484581 CDKAL1Q5VV42 579 aa6.43□□□□□ -1.38
VPS13A-211ENST00000484581 FBXW10Q5XX13 1052 aa6.43□□□□□ -1.38
VPS13A-211ENST00000484581 MPZL3Q6UWV2 235 aa6.43□□□□□ -1.38
VPS13A-211ENST00000484581 GK5Q6ZS86 529 aa6.43□□□□□ -1.38
VPS13A-211ENST00000484581 CYFIP1Q7L576 1253 aa6.43□□□□□ -1.38
VPS13A-211ENST00000484581 FILIP1Q7Z7B0 1213 aa6.43□□□□□ -1.38
VPS13A-211ENST00000484581 BHLHE22Q8NFJ8 381 aaPredicted RBP6.43□□□□□ -1.38
VPS13A-211ENST00000484581 HSPA12BQ96MM6 686 aa6.43□□□□□ -1.38
VPS13A-211ENST00000484581 SLKQ9H2G2 1235 aaPredicted RBP6.43□□□□□ -1.38
VPS13A-211ENST00000484581 CARS2Q9HA77 564 aaKnown RBP6.43□□□□□ -1.38
VPS13A-211ENST00000484581 FANCLQ9NW38 375 aa6.43□□□□□ -1.38
VPS13A-211ENST00000484581 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.43□□□□□ -1.38
VPS13A-211ENST00000484581 DNAJC6O75061 913 aa6.42□□□□□ -1.38
VPS13A-211ENST00000484581 RAB11FIP3O75154 756 aa6.42□□□□□ -1.38
VPS13A-211ENST00000484581 SLITRK5O94991 958 aa6.42□□□□□ -1.38
VPS13A-211ENST00000484581 RAP1GAPP47736 663 aa6.42□□□□□ -1.38
VPS13A-211ENST00000484581 CASP7P55210 303 aa6.42□□□□□ -1.38
VPS13A-211ENST00000484581 ANAPC15P60006 121 aa6.42□□□□□ -1.38
VPS13A-211ENST00000484581 ETF1P62495 437 aaKnown RBP6.42□□□□□ -1.38
VPS13A-211ENST00000484581 RPL6Q02878 288 aaKnown RBP6.42□□□□□ -1.38
VPS13A-211ENST00000484581 FXNQ16595 210 aa6.42□□□□□ -1.38
VPS13A-211ENST00000484581 TMEM67Q5HYA8 995 aa6.42□□□□□ -1.38
VPS13A-211ENST00000484581 LRFN4Q6PJG9 635 aa6.42□□□□□ -1.38
VPS13A-211ENST00000484581 HOMER1Q86YM7 354 aa6.42□□□□□ -1.38
VPS13A-211ENST00000484581 C19orf47Q8N9M1 422 aaKnown RBP6.42□□□□□ -1.38
VPS13A-211ENST00000484581 MFSD2AQ8NA29 543 aa6.42□□□□□ -1.38
VPS13A-211ENST00000484581 LIN37Q96GY3 246 aaPredicted RBP6.42□□□□□ -1.38
VPS13A-211ENST00000484581 KIRREL1Q96J84 757 aa6.42□□□□□ -1.38
VPS13A-211ENST00000484581 DNAJC7Q99615 494 aa6.42□□□□□ -1.38
VPS13A-211ENST00000484581 MIPEPQ99797 713 aa6.42□□□□□ -1.38
VPS13A-211ENST00000484581 WNT10AQ9GZT5 417 aa6.42□□□□□ -1.38
VPS13A-211ENST00000484581 EHMT1Q9H9B1 1298 aa6.42□□□□□ -1.38
VPS13A-211ENST00000484581 SPC25Q9HBM1 224 aa6.42□□□□□ -1.38
VPS13A-211ENST00000484581 ATP13A1Q9HD20 1204 aa6.42□□□□□ -1.38
VPS13A-211ENST00000484581 TMEM260Q9NX78 707 aa6.42□□□□□ -1.38
VPS13A-211ENST00000484581 COL4A3BPQ9Y5P4 624 aa6.42□□□□□ -1.38
VPS13A-211ENST00000484581 ATE1O95260 518 aa6.41□□□□□ -1.38
VPS13A-211ENST00000484581 GLI1P08151 1106 aa6.41□□□□□ -1.38
VPS13A-211ENST00000484581 CLCQ05315 142 aa6.41□□□□□ -1.38
VPS13A-211ENST00000484581 ARSHQ5FYA8 562 aa6.41□□□□□ -1.38
VPS13A-211ENST00000484581 LCE5AQ5TCM9 118 aa6.41□□□□□ -1.38
VPS13A-211ENST00000484581 FYB2Q5VWT5 728 aa6.41□□□□□ -1.38
VPS13A-211ENST00000484581 KIAA0907Q7Z7F0 614 aaPredicted RBP6.41□□□□□ -1.38
VPS13A-211ENST00000484581 HID1Q8IV36 788 aa6.41□□□□□ -1.38
VPS13A-211ENST00000484581 LILRB2Q8N423 598 aa6.41□□□□□ -1.38
VPS13A-211ENST00000484581 MFSD4AQ8N468 514 aa6.41□□□□□ -1.38
VPS13A-211ENST00000484581 PLPPR2Q96GM1 343 aa6.41□□□□□ -1.38
VPS13A-211ENST00000484581 CCDC120Q96HB5 630 aa6.41□□□□□ -1.38
VPS13A-211ENST00000484581 TOX2Q96NM4 488 aa6.41□□□□□ -1.38
VPS13A-211ENST00000484581 PPP1R16BQ96T49 567 aa6.41□□□□□ -1.38
VPS13A-211ENST00000484581 IFT57Q9NWB7 429 aa6.41□□□□□ -1.38
VPS13A-211ENST00000484581 SNCAIPQ9Y6H5 919 aa6.41□□□□□ -1.38
VPS13A-211ENST00000484581 ESYT3A0FGR9 886 aa6.4□□□□□ -1.38
VPS13A-211ENST00000484581 PRR33A8MZF0 331 aa6.4□□□□□ -1.38
VPS13A-211ENST00000484581 PPP1R12AO14974 1030 aaPredicted RBP6.4□□□□□ -1.38
VPS13A-211ENST00000484581 CYP7A1P22680 504 aa6.4□□□□□ -1.38
VPS13A-211ENST00000484581 PTPN11Q06124 597 aaPredicted RBP6.4□□□□□ -1.38
VPS13A-211ENST00000484581 SLBPQ14493 270 aaKnown RBP eCLIP6.4□□□□□ -1.38
VPS13A-211ENST00000484581 KRTAP19-4Q3LI73 84 aa6.4□□□□□ -1.38
VPS13A-211ENST00000484581 TAF7LQ5H9L4 462 aa6.4□□□□□ -1.38
VPS13A-211ENST00000484581 LARP1BQ659C4 914 aaKnown RBP6.4□□□□□ -1.38
VPS13A-211ENST00000484581 MICAL1Q8TDZ2 1067 aa6.4□□□□□ -1.38
VPS13A-211ENST00000484581 KANSL2Q9H9L4 492 aa6.4□□□□□ -1.38
VPS13A-211ENST00000484581 FBRSQ9HAH7 460 aa6.4□□□□□ -1.38
VPS13A-211ENST00000484581 METTL14Q9HCE5 456 aaKnown RBP6.4□□□□□ -1.38
VPS13A-211ENST00000484581 PCDH12Q9NPG4 1184 aa6.4□□□□□ -1.38
VPS13A-211ENST00000484581 ST7Q9NRC1 585 aa6.4□□□□□ -1.38
VPS13A-211ENST00000484581 POLR3KQ9Y2Y1 108 aaPredicted RBP6.4□□□□□ -1.38
VPS13A-211ENST00000484581 PCDHB14Q9Y5E9 798 aa6.4□□□□□ -1.38
VPS13A-211ENST00000484581 MEIS3P2A8K0S8 358 aa6.39□□□□□ -1.39
VPS13A-211ENST00000484581 H3BS24 57 aa6.39□□□□□ -1.39
VPS13A-211ENST00000484581 CBX7O95931 251 aa6.39□□□□□ -1.39
VPS13A-211ENST00000484581 ZNF865P0CJ78 1059 aaPredicted RBP6.39□□□□□ -1.39
VPS13A-211ENST00000484581 GDNFP39905 211 aa6.39□□□□□ -1.39
VPS13A-211ENST00000484581 C2orf27AQ580R0 203 aa6.39□□□□□ -1.39
VPS13A-211ENST00000484581 LETMD1Q6P1Q0 360 aa6.39□□□□□ -1.39
VPS13A-211ENST00000484581 C22orf34Q6ZV56 151 aa6.39□□□□□ -1.39
VPS13A-211ENST00000484581 SYDE1Q6ZW31 735 aaPredicted RBP6.39□□□□□ -1.39
VPS13A-211ENST00000484581 JMYQ8N9B5 988 aa6.39□□□□□ -1.39
VPS13A-211ENST00000484581 SEMA3GQ9NS98 782 aa6.39□□□□□ -1.39
VPS13A-211ENST00000484581 GJB6O95452 261 aa6.38□□□□□ -1.39
VPS13A-211ENST00000484581 CAP2P40123 477 aa6.38□□□□□ -1.39
VPS13A-211ENST00000484581 SQSTM1Q13501 440 aa6.38□□□□□ -1.39
VPS13A-211ENST00000484581 LRRFIP1Q32MZ4 808 aaKnown RBP6.38□□□□□ -1.39
VPS13A-211ENST00000484581 MTERF2Q49AM1 385 aa6.38□□□□□ -1.39
VPS13A-211ENST00000484581 WIPI1Q5MNZ9 446 aaPredicted RBP6.38□□□□□ -1.39
VPS13A-211ENST00000484581 PRR23BQ6ZRT6 265 aa6.38□□□□□ -1.39
VPS13A-211ENST00000484581 C16orf86Q6ZW13 317 aa6.38□□□□□ -1.39
VPS13A-211ENST00000484581 THAP5Q7Z6K1 395 aa6.38□□□□□ -1.39
VPS13A-211ENST00000484581 ANKLE2Q86XL3 938 aa6.38□□□□□ -1.39
VPS13A-211ENST00000484581 ST13P5Q8NFI4 369 aaPredicted RBP6.38□□□□□ -1.39
VPS13A-211ENST00000484581 RIN3Q8TB24 985 aa6.38□□□□□ -1.39
VPS13A-211ENST00000484581 ZSCAN18Q8TBC5 510 aaPredicted RBP6.38□□□□□ -1.39
VPS13A-211ENST00000484581 THAP3Q8WTV1 239 aaPredicted RBP6.38□□□□□ -1.39
VPS13A-211ENST00000484581 UBE2FQ969M7 185 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms