RNA–Protein interactions for RNA: ENST00000482236.5

SORT1-204, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-204ENST00000482236 COPB2P35606 906 aa13.3□□□□□ -0.28
SORT1-204ENST00000482236 NUCB1Q02818 461 aa13.3□□□□□ -0.28
SORT1-204ENST00000482236 TRIM32Q13049 653 aa13.3□□□□□ -0.28
SORT1-204ENST00000482236 KCTD2Q14681 263 aa13.3□□□□□ -0.28
SORT1-204ENST00000482236 CCDC96Q2M329 555 aa13.3□□□□□ -0.28
SORT1-204ENST00000482236 LBX2Q6XYB7 198 aa13.3□□□□□ -0.28
SORT1-204ENST00000482236 SMC5Q8IY18 1101 aa13.3□□□□□ -0.28
SORT1-204ENST00000482236 SHISA4Q96DD7 197 aa13.3□□□□□ -0.28
SORT1-204ENST00000482236 CEP95Q96GE4 821 aa13.3□□□□□ -0.28
SORT1-204ENST00000482236 FAM227BQ96M60 508 aa13.3□□□□□ -0.28
SORT1-204ENST00000482236 MMP19Q99542 508 aa13.3□□□□□ -0.28
SORT1-204ENST00000482236 NYAP2Q9P242 653 aa13.3□□□□□ -0.28
SORT1-204ENST00000482236 GJD2Q9UKL4 321 aa13.3□□□□□ -0.28
SORT1-204ENST00000482236 NR2E3Q9Y5X4 410 aa13.3□□□□□ -0.28
SORT1-204ENST00000482236 CCDC171Q6TFL3 1326 aa13.3□□□□□ -0.28
SORT1-204ENST00000482236 A0A0D9SFI3 127 aa13.29□□□□□ -0.28
SORT1-204ENST00000482236 F5H6K3 240 aa13.29□□□□□ -0.28
SORT1-204ENST00000482236 STRNO43815 780 aa13.29□□□□□ -0.28
SORT1-204ENST00000482236 EVI5O60447 810 aa13.29□□□□□ -0.28
SORT1-204ENST00000482236 NDUFB10O96000 172 aa13.29□□□□□ -0.28
SORT1-204ENST00000482236 IGHDP01880 384 aa13.29□□□□□ -0.28
SORT1-204ENST00000482236 CAPN2P17655 700 aa13.29□□□□□ -0.28
SORT1-204ENST00000482236 ADORA2AP29274 412 aa13.29□□□□□ -0.28
SORT1-204ENST00000482236 KLRC3Q07444 240 aa13.29□□□□□ -0.28
SORT1-204ENST00000482236 CCL14Q16627 93 aa13.29□□□□□ -0.28
SORT1-204ENST00000482236 KIAA1755Q5JYT7 1200 aa13.29□□□□□ -0.28
SORT1-204ENST00000482236 MORN1Q5T089 497 aa13.29□□□□□ -0.28
SORT1-204ENST00000482236 CWC27Q6UX04 472 aaKnown RBP13.29□□□□□ -0.28
SORT1-204ENST00000482236 NECAB2Q7Z6G3 386 aa13.29□□□□□ -0.28
SORT1-204ENST00000482236 CPXCR1Q8N123 301 aa13.29□□□□□ -0.28
SORT1-204ENST00000482236 SHCBP1Q8NEM2 672 aa13.29□□□□□ -0.28
SORT1-204ENST00000482236 FBXO28Q9NVF7 368 aa13.29□□□□□ -0.28
SORT1-204ENST00000482236 PPP1R9AQ9ULJ8 1098 aa13.29□□□□□ -0.28
SORT1-204ENST00000482236 SALL3Q9BXA9 1300 aa13.29□□□□□ -0.28
SORT1-204ENST00000482236 PDE4DIPQ5VU43 2346 aa13.29□□□□□ -0.28
SORT1-204ENST00000482236 HTTP42858 3142 aa13.28□□□□□ -0.28
SORT1-204ENST00000482236 STAT3P40763 770 aa13.28□□□□□ -0.28
SORT1-204ENST00000482236 SLC1A4P43007 532 aa13.28□□□□□ -0.28
SORT1-204ENST00000482236 HAND2P61296 217 aa13.28□□□□□ -0.28
SORT1-204ENST00000482236 VPS53Q5VIR6 699 aa13.28□□□□□ -0.28
SORT1-204ENST00000482236 SLFN13Q68D06 897 aa13.28□□□□□ -0.28
SORT1-204ENST00000482236 SNRNP48Q6IEG0 339 aaKnown RBP13.28□□□□□ -0.28
SORT1-204ENST00000482236 PAK6Q9NQU5 681 aaPredicted RBP13.28□□□□□ -0.28
SORT1-204ENST00000482236 MTMR4Q9NYA4 1195 aa13.28□□□□□ -0.28
SORT1-204ENST00000482236 VWA5AO00534 786 aa13.27□□□□□ -0.29
SORT1-204ENST00000482236 BMP3P12645 472 aa13.27□□□□□ -0.29
SORT1-204ENST00000482236 SDSP20132 328 aa13.27□□□□□ -0.29
SORT1-204ENST00000482236 CACNB2Q08289 660 aaPredicted RBP13.27□□□□□ -0.29
SORT1-204ENST00000482236 GRB14Q14449 540 aa13.27□□□□□ -0.29
SORT1-204ENST00000482236 SIAH1Q8IUQ4 282 aa13.27□□□□□ -0.29
SORT1-204ENST00000482236 PLEKHM2Q8IWE5 1019 aa13.27□□□□□ -0.29
SORT1-204ENST00000482236 NEDD1Q8NHV4 660 aa13.27□□□□□ -0.29
SORT1-204ENST00000482236 DDX11Q96FC9 970 aa13.27□□□□□ -0.29
SORT1-204ENST00000482236 PAWRQ96IZ0 340 aaKnown RBP13.27□□□□□ -0.29
SORT1-204ENST00000482236 TEX13BQ9BXU2 312 aa13.27□□□□□ -0.29
SORT1-204ENST00000482236 RNF41Q9H4P4 317 aaPredicted RBP13.27□□□□□ -0.29
SORT1-204ENST00000482236 FEM1BQ9UK73 627 aa13.27□□□□□ -0.29
SORT1-204ENST00000482236 CCND3P30281 292 aaPredicted RBP13.26□□□□□ -0.29
SORT1-204ENST00000482236 CYP2C19P33261 490 aa13.26□□□□□ -0.29
SORT1-204ENST00000482236 STAT2P52630 851 aa13.26□□□□□ -0.29
SORT1-204ENST00000482236 TMEM132BQ14DG7 1078 aa13.26□□□□□ -0.29
SORT1-204ENST00000482236 MFSD6Q6ZSS7 791 aa13.26□□□□□ -0.29
SORT1-204ENST00000482236 ANKLE1Q8NAG6 615 aa13.26□□□□□ -0.29
SORT1-204ENST00000482236 PRPF38AQ8NAV1 312 aaKnown RBP13.26□□□□□ -0.29
SORT1-204ENST00000482236 NBPF3Q9H094 633 aa13.26□□□□□ -0.29
SORT1-204ENST00000482236 C11orf49Q9H6J7 331 aa13.26□□□□□ -0.29
SORT1-204ENST00000482236 HOMER2Q9NSB8 354 aa13.26□□□□□ -0.29
SORT1-204ENST00000482236 PLIN4Q96Q06 1357 aa13.25□□□□□ -0.29
SORT1-204ENST00000482236 TMEM232C9JQI7 657 aa13.25□□□□□ -0.29
SORT1-204ENST00000482236 ZNF213O14771 459 aa13.25□□□□□ -0.29
SORT1-204ENST00000482236 MSCO60682 206 aa13.25□□□□□ -0.29
SORT1-204ENST00000482236 HSPD1P10809 573 aaKnown RBP13.25□□□□□ -0.29
SORT1-204ENST00000482236 ZNF589Q86UQ0 364 aaPredicted RBP13.25□□□□□ -0.29
SORT1-204ENST00000482236 FAM160B2Q86V87 743 aa13.25□□□□□ -0.29
SORT1-204ENST00000482236 TICAM2Q86XR7 235 aa13.25□□□□□ -0.29
SORT1-204ENST00000482236 RIOX2Q8IUF8 465 aa13.25□□□□□ -0.29
SORT1-204ENST00000482236 ANKRD35Q8N283 1001 aa13.25□□□□□ -0.29
SORT1-204ENST00000482236 GMCL1P1Q8NEA9 526 aa13.25□□□□□ -0.29
SORT1-204ENST00000482236 DIS3LQ8TF46 1054 aaKnown RBP13.25□□□□□ -0.29
SORT1-204ENST00000482236 CHURC1Q8WUH1 139 aa13.25□□□□□ -0.29
SORT1-204ENST00000482236 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.25□□□□□ -0.29
SORT1-204ENST00000482236 SYNPO2Q9UMS6 1093 aa13.25□□□□□ -0.29
SORT1-204ENST00000482236 H0YGN5 161 aa13.24□□□□□ -0.29
SORT1-204ENST00000482236 FGAP02671 866 aa13.24□□□□□ -0.29
SORT1-204ENST00000482236 PGK2P07205 417 aa13.24□□□□□ -0.29
SORT1-204ENST00000482236 MCCP23508 829 aa13.24□□□□□ -0.29
SORT1-204ENST00000482236 IMMTQ16891 758 aaKnown RBP13.24□□□□□ -0.29
SORT1-204ENST00000482236 CCDC174Q6PII3 467 aa13.24□□□□□ -0.29
SORT1-204ENST00000482236 POTEEQ6S8J3 1075 aa13.24□□□□□ -0.29
SORT1-204ENST00000482236 C7orf61Q8IZ16 206 aa13.24□□□□□ -0.29
SORT1-204ENST00000482236 ABRAQ8N0Z2 381 aa13.24□□□□□ -0.29
SORT1-204ENST00000482236 NPLOC4Q8TAT6 608 aa13.24□□□□□ -0.29
SORT1-204ENST00000482236 RUFY2Q8WXA3 655 aa13.24□□□□□ -0.29
SORT1-204ENST00000482236 ESR2Q92731 530 aa13.24□□□□□ -0.29
SORT1-204ENST00000482236 USP6NLQ92738 828 aa13.24□□□□□ -0.29
SORT1-204ENST00000482236 RAVER2Q9HCJ3 691 aaKnown RBP13.24□□□□□ -0.29
SORT1-204ENST00000482236 DDX20Q9UHI6 824 aaKnown RBP13.24□□□□□ -0.29
SORT1-204ENST00000482236 CTNNA3Q9UI47 895 aa13.24□□□□□ -0.29
SORT1-204ENST00000482236 CNPY2Q9Y2B0 182 aa13.24□□□□□ -0.29
SORT1-204ENST00000482236 IGKV6D-41A0A0C4DH26 115 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms