RNA–Protein interactions for RNA: ENST00000479100.1

COL16A1-211, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 740 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-211ENST00000479100 SNX14Q9Y5W7 946 aa17.87■□□□□ 0.45
COL16A1-211ENST00000479100 TNKSO95271 1327 aa17.87■□□□□ 0.45
COL16A1-211ENST00000479100 LOC285556D6RIA3 1793 aa17.86■□□□□ 0.45
COL16A1-211ENST00000479100 POTEFA5A3E0 1075 aa17.86■□□□□ 0.45
COL16A1-211ENST00000479100 WDR46O15213 610 aaKnown RBP17.86■□□□□ 0.45
COL16A1-211ENST00000479100 PRC1O43663 620 aa17.86■□□□□ 0.45
COL16A1-211ENST00000479100 MCM5P33992 734 aa17.86■□□□□ 0.45
COL16A1-211ENST00000479100 SART3Q15020 963 aaKnown RBP17.86■□□□□ 0.45
COL16A1-211ENST00000479100 TMEM67Q5HYA8 995 aa17.86■□□□□ 0.45
COL16A1-211ENST00000479100 RCSD1Q6JBY9 416 aa17.86■□□□□ 0.45
COL16A1-211ENST00000479100 CATSPERGQ6ZRH7 1159 aa17.86■□□□□ 0.45
COL16A1-211ENST00000479100 DGKHQ86XP1 1220 aa17.86■□□□□ 0.45
COL16A1-211ENST00000479100 GMCL1P1Q8NEA9 526 aa17.86■□□□□ 0.45
COL16A1-211ENST00000479100 NEK1Q96PY6 1258 aa17.86■□□□□ 0.45
COL16A1-211ENST00000479100 P2RX7Q99572 595 aaKnown RBP17.86■□□□□ 0.45
COL16A1-211ENST00000479100 ARHGAP39Q9C0H5 1083 aa17.86■□□□□ 0.45
COL16A1-211ENST00000479100 KAT14Q9H8E8 782 aa17.86■□□□□ 0.45
COL16A1-211ENST00000479100 CPA4Q9UI42 421 aa17.86■□□□□ 0.45
COL16A1-211ENST00000479100 SYNPO2Q9UMS6 1093 aa17.86■□□□□ 0.45
COL16A1-211ENST00000479100 ADGRA2Q96PE1 1338 aa17.86■□□□□ 0.45
COL16A1-211ENST00000479100 NOVP48745 357 aa17.85■□□□□ 0.45
COL16A1-211ENST00000479100 ANTXR2P58335 489 aa17.85■□□□□ 0.45
COL16A1-211ENST00000479100 LACTBP83111 547 aaPredicted RBP17.85■□□□□ 0.45
COL16A1-211ENST00000479100 ADCK5Q3MIX3 580 aa17.85■□□□□ 0.45
COL16A1-211ENST00000479100 TSGA10IPQ3SY00 556 aa17.85■□□□□ 0.45
COL16A1-211ENST00000479100 IFIT1BQ5T764 474 aaKnown RBP17.85■□□□□ 0.45
COL16A1-211ENST00000479100 KCNB2Q92953 911 aa17.85■□□□□ 0.45
COL16A1-211ENST00000479100 JAKMIP1Q96N16 626 aaKnown RBP17.85■□□□□ 0.45
COL16A1-211ENST00000479100 MYH4Q9Y623 1939 aa17.85■□□□□ 0.45
COL16A1-211ENST00000479100 PTCH2Q9Y6C5 1203 aa17.85■□□□□ 0.45
COL16A1-211ENST00000479100 FLOT1O75955 427 aa17.84■□□□□ 0.45
COL16A1-211ENST00000479100 CTGFP29279 349 aa17.84■□□□□ 0.45
COL16A1-211ENST00000479100 SLC1A4P43007 532 aa17.84■□□□□ 0.45
COL16A1-211ENST00000479100 HERVK_113P62684 666 aa17.84■□□□□ 0.45
COL16A1-211ENST00000479100 COL9A3Q14050 684 aaPredicted RBP17.84■□□□□ 0.45
COL16A1-211ENST00000479100 WTAPQ15007 396 aa17.84■□□□□ 0.45
COL16A1-211ENST00000479100 CCDC96Q2M329 555 aa17.84■□□□□ 0.45
COL16A1-211ENST00000479100 ZNF333Q96JL9 665 aa17.84■□□□□ 0.45
COL16A1-211ENST00000479100 LRRC2Q9BYS8 371 aa17.84■□□□□ 0.45
COL16A1-211ENST00000479100 ECM2O94769 699 aaPredicted RBP17.83■□□□□ 0.44
COL16A1-211ENST00000479100 SLC34A2O95436 690 aa17.83■□□□□ 0.44
COL16A1-211ENST00000479100 BMP3P12645 472 aa17.83■□□□□ 0.44
COL16A1-211ENST00000479100 IKQ13123 557 aaPredicted RBP17.83■□□□□ 0.44
COL16A1-211ENST00000479100 COG2Q14746 738 aa17.83■□□□□ 0.44
COL16A1-211ENST00000479100 ARHGEF6Q15052 776 aa17.83■□□□□ 0.44
COL16A1-211ENST00000479100 SEC23AQ15436 765 aa17.83■□□□□ 0.44
COL16A1-211ENST00000479100 RASGRP2Q7LDG7 609 aa17.83■□□□□ 0.44
COL16A1-211ENST00000479100 PNMA1Q8ND90 353 aa17.83■□□□□ 0.44
COL16A1-211ENST00000479100 ANKS1AQ92625 1134 aa17.83■□□□□ 0.44
COL16A1-211ENST00000479100 PAGR1Q9BTK6 254 aa17.83■□□□□ 0.44
COL16A1-211ENST00000479100 FBXO28Q9NVF7 368 aa17.83■□□□□ 0.44
COL16A1-211ENST00000479100 CPA1P15085 419 aa17.82■□□□□ 0.44
COL16A1-211ENST00000479100 PRPF38BQ5VTL8 546 aaKnown RBP17.82■□□□□ 0.44
COL16A1-211ENST00000479100 NFXL1Q6ZNB6 911 aa17.82■□□□□ 0.44
COL16A1-211ENST00000479100 KCTD1Q719H9 257 aa17.82■□□□□ 0.44
COL16A1-211ENST00000479100 DHX32Q7L7V1 743 aaKnown RBP17.82■□□□□ 0.44
COL16A1-211ENST00000479100 ANKRD13CQ8N6S4 541 aa17.82■□□□□ 0.44
COL16A1-211ENST00000479100 DCAF4Q8WV16 495 aa17.82■□□□□ 0.44
COL16A1-211ENST00000479100 GMCL1Q96IK5 515 aa17.82■□□□□ 0.44
COL16A1-211ENST00000479100 TCEANC2Q96MN5 208 aa17.82■□□□□ 0.44
COL16A1-211ENST00000479100 GPCPD1Q9NPB8 672 aa17.82■□□□□ 0.44
COL16A1-211ENST00000479100 GPHNQ9NQX3 736 aaPredicted RBP17.82■□□□□ 0.44
COL16A1-211ENST00000479100 HOXC10Q9NYD6 342 aa17.82■□□□□ 0.44
COL16A1-211ENST00000479100 FRMPD2Q68DX3 1309 aaPredicted RBP17.81■□□□□ 0.44
COL16A1-211ENST00000479100 TMEM232C9JQI7 657 aa17.81■□□□□ 0.44
COL16A1-211ENST00000479100 GNRH1P01148 92 aa17.81■□□□□ 0.44
COL16A1-211ENST00000479100 HMGB1P09429 215 aaKnown RBP17.81■□□□□ 0.44
COL16A1-211ENST00000479100 CASTP20810 708 aaKnown RBP17.81■□□□□ 0.44
COL16A1-211ENST00000479100 PSMA5P28066 241 aa17.81■□□□□ 0.44
COL16A1-211ENST00000479100 DSG3P32926 999 aa17.81■□□□□ 0.44
COL16A1-211ENST00000479100 GCLCP48506 637 aaPredicted RBP17.81■□□□□ 0.44
COL16A1-211ENST00000479100 FGD1P98174 961 aa17.81■□□□□ 0.44
COL16A1-211ENST00000479100 BLOC1S2Q6QNY1 142 aa17.81■□□□□ 0.44
COL16A1-211ENST00000479100 IGDCC4Q8TDY8 1250 aa17.81■□□□□ 0.44
COL16A1-211ENST00000479100 TMEM87BQ96K49 555 aa17.81■□□□□ 0.44
COL16A1-211ENST00000479100 SENP2Q9HC62 589 aa17.81■□□□□ 0.44
COL16A1-211ENST00000479100 FEM1BQ9UK73 627 aa17.81■□□□□ 0.44
COL16A1-211ENST00000479100 KIAA0100Q14667 2235 aaKnown RBP17.8■□□□□ 0.44
COL16A1-211ENST00000479100 SPDYE16A6NNV3 312 aaPredicted RBP17.8■□□□□ 0.44
COL16A1-211ENST00000479100 SH2B2O14492 632 aaPredicted RBP17.8■□□□□ 0.44
COL16A1-211ENST00000479100 PEX10O60683 326 aa17.8■□□□□ 0.44
COL16A1-211ENST00000479100 BCRP11274 1271 aa17.8■□□□□ 0.44
COL16A1-211ENST00000479100 GTF3C2Q8WUA4 911 aaPredicted RBP17.8■□□□□ 0.44
COL16A1-211ENST00000479100 KIFC2Q96AC6 838 aa17.8■□□□□ 0.44
COL16A1-211ENST00000479100 ATG4CQ96DT6 458 aa17.8■□□□□ 0.44
COL16A1-211ENST00000479100 SLF1Q9BQI6 1058 aa17.8■□□□□ 0.44
COL16A1-211ENST00000479100 LY9Q9HBG7 655 aa17.8■□□□□ 0.44
COL16A1-211ENST00000479100 CTDP1Q9Y5B0 961 aaPredicted RBP17.8■□□□□ 0.44
COL16A1-211ENST00000479100 CCDC69A6NI79 296 aa17.79■□□□□ 0.44
COL16A1-211ENST00000479100 PDHBP11177 359 aa17.79■□□□□ 0.44
COL16A1-211ENST00000479100 EN2P19622 333 aaPredicted RBP17.79■□□□□ 0.44
COL16A1-211ENST00000479100 EXOSC10Q01780 885 aaKnown RBP17.79■□□□□ 0.44
COL16A1-211ENST00000479100 CATIPQ7Z7H3 387 aa17.79■□□□□ 0.44
COL16A1-211ENST00000479100 CHURC1Q8WUH1 139 aa17.79■□□□□ 0.44
COL16A1-211ENST00000479100 TRIM47Q96LD4 638 aa17.79■□□□□ 0.44
COL16A1-211ENST00000479100 MTA3Q9BTC8 594 aa17.79■□□□□ 0.44
COL16A1-211ENST00000479100 RBPJLQ9UBG7 517 aa17.79■□□□□ 0.44
COL16A1-211ENST00000479100 PPP1R9AQ9ULJ8 1098 aa17.79■□□□□ 0.44
COL16A1-211ENST00000479100 GOLGA8HP0CJ92 632 aa17.78■□□□□ 0.44
COL16A1-211ENST00000479100 RPS6KB1P23443 525 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms