RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 CCDC186Q7Z3E2 898 aa5.94□□□□□ -1.46
USF3-202ENST00000478658 NT5DC4Q86YG4 428 aa5.94□□□□□ -1.46
USF3-202ENST00000478658 ZNF579Q8NAF0 562 aaKnown RBP5.94□□□□□ -1.46
USF3-202ENST00000478658 ERO1AQ96HE7 468 aa5.94□□□□□ -1.46
USF3-202ENST00000478658 VPS50Q96JG6 964 aa5.94□□□□□ -1.46
USF3-202ENST00000478658 TMEM87BQ96K49 555 aa5.94□□□□□ -1.46
USF3-202ENST00000478658 ASPSCR1Q9BZE9 553 aa5.94□□□□□ -1.46
USF3-202ENST00000478658 MAST3O60307 1309 aa5.94□□□□□ -1.46
USF3-202ENST00000478658 H7C1W4 665 aa5.94□□□□□ -1.46
USF3-202ENST00000478658 GNGT2O14610 69 aa5.94□□□□□ -1.46
USF3-202ENST00000478658 BCRP11274 1271 aa5.94□□□□□ -1.46
USF3-202ENST00000478658 ATXN3P54252 364 aaPredicted RBP5.94□□□□□ -1.46
USF3-202ENST00000478658 NCKAP1LP55160 1127 aa5.94□□□□□ -1.46
USF3-202ENST00000478658 PPIDQ08752 370 aaKnown RBP5.94□□□□□ -1.46
USF3-202ENST00000478658 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.94□□□□□ -1.46
USF3-202ENST00000478658 ABTB1Q969K4 478 aaPredicted RBP5.94□□□□□ -1.46
USF3-202ENST00000478658 C8orf76Q96K31 380 aa5.94□□□□□ -1.46
USF3-202ENST00000478658 BRAFP15056 766 aa5.94□□□□□ -1.46
USF3-202ENST00000478658 ACADLP28330 430 aa5.94□□□□□ -1.46
USF3-202ENST00000478658 AP1S1P61966 158 aa5.94□□□□□ -1.46
USF3-202ENST00000478658 MMEL1Q495T6 779 aa5.94□□□□□ -1.46
USF3-202ENST00000478658 PARP10Q53GL7 1025 aa5.94□□□□□ -1.46
USF3-202ENST00000478658 TTC22Q5TAA0 569 aa5.94□□□□□ -1.46
USF3-202ENST00000478658 IRAK1BP1Q5VVH5 260 aa5.94□□□□□ -1.46
USF3-202ENST00000478658 RETREG2Q8NC44 543 aa5.94□□□□□ -1.46
USF3-202ENST00000478658 GOLGA5Q8TBA6 731 aa5.94□□□□□ -1.46
USF3-202ENST00000478658 NYXQ9GZU5 481 aa5.94□□□□□ -1.46
USF3-202ENST00000478658 RBSNQ9H1K0 784 aa5.94□□□□□ -1.46
USF3-202ENST00000478658 ATPIF1Q9UII2 106 aa5.94□□□□□ -1.46
USF3-202ENST00000478658 PAIP2BQ9ULR5 123 aaKnown RBP5.94□□□□□ -1.46
USF3-202ENST00000478658 C16orf96A6NNT2 1141 aa5.94□□□□□ -1.46
USF3-202ENST00000478658 ECDO95905 644 aaPredicted RBP5.94□□□□□ -1.46
USF3-202ENST00000478658 HNRNPH1P31943 449 aaKnown RBP5.94□□□□□ -1.46
USF3-202ENST00000478658 ITGADQ13349 1161 aa5.94□□□□□ -1.46
USF3-202ENST00000478658 ARHGAP44Q17R89 818 aa5.94□□□□□ -1.46
USF3-202ENST00000478658 ZC3H12BQ5HYM0 836 aaKnown RBP5.94□□□□□ -1.46
USF3-202ENST00000478658 CCDC13Q8IYE1 715 aa5.94□□□□□ -1.46
USF3-202ENST00000478658 KRT78Q8N1N4 520 aa5.94□□□□□ -1.46
USF3-202ENST00000478658 RSPH1Q8WYR4 309 aa5.94□□□□□ -1.46
USF3-202ENST00000478658 ZBTB18Q99592 522 aa5.94□□□□□ -1.46
USF3-202ENST00000478658 PICK1Q9NRD5 415 aa5.94□□□□□ -1.46
USF3-202ENST00000478658 KHDRBS3O75525 346 aaKnown RBP5.93□□□□□ -1.46
USF3-202ENST00000478658 RASSF9O75901 435 aa5.93□□□□□ -1.46
USF3-202ENST00000478658 TOMM70O94826 608 aa5.93□□□□□ -1.46
USF3-202ENST00000478658 CCT8P50990 548 aa5.93□□□□□ -1.46
USF3-202ENST00000478658 NRG3P56975 720 aa5.93□□□□□ -1.46
USF3-202ENST00000478658 SNAP25P60880 206 aa5.93□□□□□ -1.46
USF3-202ENST00000478658 PUM3Q15397 648 aaKnown RBP5.93□□□□□ -1.46
USF3-202ENST00000478658 ASIC2Q16515 512 aa5.93□□□□□ -1.46
USF3-202ENST00000478658 MEI1Q5TIA1 1274 aa5.93□□□□□ -1.46
USF3-202ENST00000478658 ATG16L1Q676U5 607 aa5.93□□□□□ -1.46
USF3-202ENST00000478658 HAUS3Q68CZ6 603 aa5.93□□□□□ -1.46
USF3-202ENST00000478658 UPF3AQ9H1J1 476 aaKnown RBP5.93□□□□□ -1.46
USF3-202ENST00000478658 PARVGQ9HBI0 331 aa5.93□□□□□ -1.46
USF3-202ENST00000478658 FKBP14Q9NWM8 211 aa5.93□□□□□ -1.46
USF3-202ENST00000478658 ERAP1Q9NZ08 941 aa5.93□□□□□ -1.46
USF3-202ENST00000478658 N4BP1O75113 896 aaKnown RBP5.93□□□□□ -1.46
USF3-202ENST00000478658 MMEP08473 750 aa5.93□□□□□ -1.46
USF3-202ENST00000478658 APBA1Q02410 837 aa5.93□□□□□ -1.46
USF3-202ENST00000478658 TBC1D10BQ4KMP7 808 aaPredicted RBP5.93□□□□□ -1.46
USF3-202ENST00000478658 CNNM4Q6P4Q7 775 aa5.93□□□□□ -1.46
USF3-202ENST00000478658 IKBIPQ70UQ0 350 aa5.93□□□□□ -1.46
USF3-202ENST00000478658 TEKT4Q8WW24 435 aa5.93□□□□□ -1.46
USF3-202ENST00000478658 TRIM62Q9BVG3 475 aa5.93□□□□□ -1.46
USF3-202ENST00000478658 ST7Q9NRC1 585 aa5.93□□□□□ -1.46
USF3-202ENST00000478658 PACSIN2Q9UNF0 486 aaPredicted RBP5.93□□□□□ -1.46
USF3-202ENST00000478658 SLC4A7Q9Y6M7 1214 aa5.93□□□□□ -1.46
USF3-202ENST00000478658 STXBP3O00186 592 aa5.93□□□□□ -1.46
USF3-202ENST00000478658 PRPF6O94906 941 aaKnown RBP5.93□□□□□ -1.46
USF3-202ENST00000478658 MUM1Q2TAK8 710 aa5.93□□□□□ -1.46
USF3-202ENST00000478658 FASTKD5Q7L8L6 764 aaKnown RBP5.93□□□□□ -1.46
USF3-202ENST00000478658 ZNF692Q9BU19 519 aaPredicted RBP5.93□□□□□ -1.46
USF3-202ENST00000478658 DDX56Q9NY93 547 aaKnown RBP5.93□□□□□ -1.46
USF3-202ENST00000478658 WWP2O00308 870 aa5.93□□□□□ -1.46
USF3-202ENST00000478658 ATF4P18848 351 aaPredicted RBP5.93□□□□□ -1.46
USF3-202ENST00000478658 MX1P20591 662 aa5.93□□□□□ -1.46
USF3-202ENST00000478658 STAT6P42226 847 aa5.93□□□□□ -1.46
USF3-202ENST00000478658 UVSSAQ2YD98 709 aa5.93□□□□□ -1.46
USF3-202ENST00000478658 HP1BP3Q5SSJ5 553 aaPredicted RBP5.93□□□□□ -1.46
USF3-202ENST00000478658 ACRBPQ8NEB7 543 aa5.93□□□□□ -1.46
USF3-202ENST00000478658 PARD3BQ8TEW8 1205 aa5.93□□□□□ -1.46
USF3-202ENST00000478658 SART1O43290 800 aaKnown RBP5.93□□□□□ -1.46
USF3-202ENST00000478658 PURAQ00577 322 aaKnown RBP5.93□□□□□ -1.46
USF3-202ENST00000478658 HHATQ5VTY9 493 aa5.93□□□□□ -1.46
USF3-202ENST00000478658 MED4Q9NPJ6 270 aa5.93□□□□□ -1.46
USF3-202ENST00000478658 LZTFL1Q9NQ48 299 aa5.93□□□□□ -1.46
USF3-202ENST00000478658 NLRP2Q9NX02 1062 aa5.93□□□□□ -1.46
USF3-202ENST00000478658 ARL2BPQ9Y2Y0 163 aa5.93□□□□□ -1.46
USF3-202ENST00000478658 FARP1Q9Y4F1 1045 aaPredicted RBP5.93□□□□□ -1.46
USF3-202ENST00000478658 MYOM3Q5VTT5 1437 aa5.93□□□□□ -1.46
USF3-202ENST00000478658 GNA14O95837 355 aa5.93□□□□□ -1.46
USF3-202ENST00000478658 RALBP11234 206 aa5.93□□□□□ -1.46
USF3-202ENST00000478658 PAMP19021 973 aa5.93□□□□□ -1.46
USF3-202ENST00000478658 CAPZA2P47755 286 aa5.93□□□□□ -1.46
USF3-202ENST00000478658 INTS4Q96HW7 963 aaKnown RBP5.93□□□□□ -1.46
USF3-202ENST00000478658 FAM193BQ96PV7 902 aaPredicted RBP5.93□□□□□ -1.46
USF3-202ENST00000478658 SELENOSQ9BQE4 189 aa5.93□□□□□ -1.46
USF3-202ENST00000478658 TBKBP1A7MCY6 615 aa5.93□□□□□ -1.46
USF3-202ENST00000478658 SRGAP3O43295 1099 aa5.93□□□□□ -1.46
USF3-202ENST00000478658 RASA1P20936 1047 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms