RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-208ENST00000475997 SMIM23A6NLE4 172 aa6.77□□□□□ -1.33
HNRNPU-208ENST00000475997 MAP3K7CLP57077 242 aa6.77□□□□□ -1.33
HNRNPU-208ENST00000475997 PDCD2Q16342 344 aaPredicted RBP6.77□□□□□ -1.33
HNRNPU-208ENST00000475997 NUTM2AQ8IVF1 878 aaPredicted RBP6.77□□□□□ -1.33
HNRNPU-208ENST00000475997 MORC4Q8TE76 937 aa6.77□□□□□ -1.33
HNRNPU-208ENST00000475997 NCAPGQ9BPX3 1015 aa6.77□□□□□ -1.33
HNRNPU-208ENST00000475997 MED4Q9NPJ6 270 aa6.77□□□□□ -1.33
HNRNPU-208ENST00000475997 NFE2L3Q9Y4A8 694 aa6.77□□□□□ -1.33
HNRNPU-208ENST00000475997 NCAPD2Q15021 1401 aa6.77□□□□□ -1.33
HNRNPU-208ENST00000475997 TCHHQ07283 1943 aa6.77□□□□□ -1.33
HNRNPU-208ENST00000475997 hCG_1642624A0A1W2PR95 340 aa6.77□□□□□ -1.33
HNRNPU-208ENST00000475997 BTBD18B2RXH4 712 aa6.77□□□□□ -1.33
HNRNPU-208ENST00000475997 NBPF26B4DH59 902 aa6.77□□□□□ -1.33
HNRNPU-208ENST00000475997 EVI5O60447 810 aa6.77□□□□□ -1.33
HNRNPU-208ENST00000475997 CUTAO60888 179 aa6.77□□□□□ -1.33
HNRNPU-208ENST00000475997 OPHN1O60890 802 aa6.77□□□□□ -1.33
HNRNPU-208ENST00000475997 RBM6P78332 1123 aaKnown RBP6.77□□□□□ -1.33
HNRNPU-208ENST00000475997 PLCB3Q01970 1234 aa6.77□□□□□ -1.33
HNRNPU-208ENST00000475997 DMTNQ08495 405 aa6.77□□□□□ -1.33
HNRNPU-208ENST00000475997 CCDC122Q5T0U0 273 aa6.77□□□□□ -1.33
HNRNPU-208ENST00000475997 NBPF14Q5TI25 921 aa6.77□□□□□ -1.33
HNRNPU-208ENST00000475997 NBPF10Q6P3W6 841 aaKnown RBP6.77□□□□□ -1.33
HNRNPU-208ENST00000475997 TRMT44Q8IYL2 757 aaKnown RBP6.77□□□□□ -1.33
HNRNPU-208ENST00000475997 NBPF15Q8N660 670 aa6.77□□□□□ -1.33
HNRNPU-208ENST00000475997 CUL5Q93034 780 aa6.77□□□□□ -1.33
HNRNPU-208ENST00000475997 CARD6Q9BX69 1037 aa6.77□□□□□ -1.33
HNRNPU-208ENST00000475997 GREM2Q9H772 168 aa6.77□□□□□ -1.33
HNRNPU-208ENST00000475997 FANCLQ9NW38 375 aa6.77□□□□□ -1.33
HNRNPU-208ENST00000475997 ZNF609O15014 1411 aa6.77□□□□□ -1.33
HNRNPU-208ENST00000475997 TBCAO75347 108 aaKnown RBP6.77□□□□□ -1.33
HNRNPU-208ENST00000475997 PDE6AP16499 860 aa6.77□□□□□ -1.33
HNRNPU-208ENST00000475997 SLC39A14Q15043 492 aa6.77□□□□□ -1.33
HNRNPU-208ENST00000475997 CCDC25Q86WR0 208 aa6.77□□□□□ -1.33
HNRNPU-208ENST00000475997 GABPB2Q8TAK5 448 aaPredicted RBP6.77□□□□□ -1.33
HNRNPU-208ENST00000475997 SEPT8Q92599 483 aa6.77□□□□□ -1.33
HNRNPU-208ENST00000475997 POLR3EQ9NVU0 708 aa6.77□□□□□ -1.33
HNRNPU-208ENST00000475997 ASAP1Q9ULH1 1129 aa6.77□□□□□ -1.33
HNRNPU-208ENST00000475997 SCINQ9Y6U3 715 aa6.77□□□□□ -1.33
HNRNPU-208ENST00000475997 AKR1B15C9JRZ8 316 aaPredicted RBP6.77□□□□□ -1.33
HNRNPU-208ENST00000475997 PRDM1O75626 825 aa6.77□□□□□ -1.33
HNRNPU-208ENST00000475997 PHKA1P46020 1223 aa6.77□□□□□ -1.33
HNRNPU-208ENST00000475997 KIF23Q02241 960 aaPredicted RBP6.77□□□□□ -1.33
HNRNPU-208ENST00000475997 ZNF827Q17R98 1081 aa6.77□□□□□ -1.33
HNRNPU-208ENST00000475997 RABL6Q3YEC7 729 aaPredicted RBP6.77□□□□□ -1.33
HNRNPU-208ENST00000475997 IFIT1BQ5T764 474 aaKnown RBP6.77□□□□□ -1.33
HNRNPU-208ENST00000475997 SEL1L2Q5TEA6 688 aa6.77□□□□□ -1.33
HNRNPU-208ENST00000475997 SYCP3Q8IZU3 236 aa6.77□□□□□ -1.33
HNRNPU-208ENST00000475997 SYNE4Q8N205 404 aa6.77□□□□□ -1.33
HNRNPU-208ENST00000475997 NEK11Q8NG66 645 aa6.77□□□□□ -1.33
HNRNPU-208ENST00000475997 TSKSQ9UJT2 592 aa6.77□□□□□ -1.33
HNRNPU-208ENST00000475997 PCDHA5Q9Y5H7 936 aa6.77□□□□□ -1.33
HNRNPU-208ENST00000475997 DIP2AQ14689 1571 aa6.76□□□□□ -1.33
HNRNPU-208ENST00000475997 USP27XA6NNY8 438 aa6.76□□□□□ -1.33
HNRNPU-208ENST00000475997 ATP8B1O43520 1251 aa6.76□□□□□ -1.33
HNRNPU-208ENST00000475997 ATP1A3P13637 1013 aa6.76□□□□□ -1.33
HNRNPU-208ENST00000475997 CDC25BP30305 580 aa6.76□□□□□ -1.33
HNRNPU-208ENST00000475997 RFX5P48382 616 aaPredicted RBP6.76□□□□□ -1.33
HNRNPU-208ENST00000475997 VWA3BQ502W6 1294 aa6.76□□□□□ -1.33
HNRNPU-208ENST00000475997 RILPL1Q5EBL4 403 aa6.76□□□□□ -1.33
HNRNPU-208ENST00000475997 LGSNQ5TDP6 509 aa6.76□□□□□ -1.33
HNRNPU-208ENST00000475997 APOA5Q6Q788 366 aa6.76□□□□□ -1.33
HNRNPU-208ENST00000475997 ATG9AQ7Z3C6 839 aa6.76□□□□□ -1.33
HNRNPU-208ENST00000475997 MSANTD4Q8NCY6 345 aa6.76□□□□□ -1.33
HNRNPU-208ENST00000475997 ERMNQ8TAM6 284 aa6.76□□□□□ -1.33
HNRNPU-208ENST00000475997 KLHL14Q9P2G3 628 aa6.76□□□□□ -1.33
HNRNPU-208ENST00000475997 CIAO1O76071 339 aa6.76□□□□□ -1.33
HNRNPU-208ENST00000475997 PCCAP05165 728 aaPredicted RBP6.76□□□□□ -1.33
HNRNPU-208ENST00000475997 TROVE2P10155 538 aaKnown RBP eCLIP6.76□□□□□ -1.33
HNRNPU-208ENST00000475997 FOXO4P98177 505 aa6.76□□□□□ -1.33
HNRNPU-208ENST00000475997 GOLGA8FQ08AF8 430 aa6.76□□□□□ -1.33
HNRNPU-208ENST00000475997 GOLGA8DPQ0D2H9 430 aa6.76□□□□□ -1.33
HNRNPU-208ENST00000475997 IQCB1Q15051 598 aa6.76□□□□□ -1.33
HNRNPU-208ENST00000475997 CCDC152Q4G0S7 254 aa6.76□□□□□ -1.33
HNRNPU-208ENST00000475997 AEBP2Q6ZN18 517 aaPredicted RBP6.76□□□□□ -1.33
HNRNPU-208ENST00000475997 ZBTB38Q8NAP3 1195 aaPredicted RBP6.76□□□□□ -1.33
HNRNPU-208ENST00000475997 STAMQ92783 540 aa6.76□□□□□ -1.33
HNRNPU-208ENST00000475997 MMRN2Q9H8L6 949 aa6.76□□□□□ -1.33
HNRNPU-208ENST00000475997 HOMER3Q9NSC5 361 aa6.76□□□□□ -1.33
HNRNPU-208ENST00000475997 NIP7Q9Y221 180 aaKnown RBP eCLIP6.76□□□□□ -1.33
HNRNPU-208ENST00000475997 JRKLQ9Y4A0 524 aa6.76□□□□□ -1.33
HNRNPU-208ENST00000475997 ADGRL3Q9HAR2 1447 aa6.76□□□□□ -1.33
HNRNPU-208ENST00000475997 UTYO14607 1347 aa6.76□□□□□ -1.33
HNRNPU-208ENST00000475997 DIP2BQ9P265 1576 aa6.76□□□□□ -1.33
HNRNPU-208ENST00000475997 A0A087WUV0 522 aaPredicted RBP6.76□□□□□ -1.33
HNRNPU-208ENST00000475997 SPECC1L-ADORA2AF8WAN1 911 aa6.76□□□□□ -1.33
HNRNPU-208ENST00000475997 I3L4J1 428 aa6.76□□□□□ -1.33
HNRNPU-208ENST00000475997 PDE8AO60658 829 aa6.76□□□□□ -1.33
HNRNPU-208ENST00000475997 ETF1P62495 437 aaKnown RBP6.76□□□□□ -1.33
HNRNPU-208ENST00000475997 EXOSC10Q01780 885 aaKnown RBP6.76□□□□□ -1.33
HNRNPU-208ENST00000475997 APBA1Q02410 837 aa6.76□□□□□ -1.33
HNRNPU-208ENST00000475997 NCBP1Q09161 790 aaKnown RBP6.76□□□□□ -1.33
HNRNPU-208ENST00000475997 PUM3Q15397 648 aaKnown RBP6.76□□□□□ -1.33
HNRNPU-208ENST00000475997 HHATQ5VTY9 493 aa6.76□□□□□ -1.33
HNRNPU-208ENST00000475997 FMR1NBQ8N0W7 255 aaPredicted RBP6.76□□□□□ -1.33
HNRNPU-208ENST00000475997 LRRC43Q8N309 656 aa6.76□□□□□ -1.33
HNRNPU-208ENST00000475997 CCT6BQ92526 530 aa6.76□□□□□ -1.33
HNRNPU-208ENST00000475997 ACSBG1Q96GR2 724 aa6.76□□□□□ -1.33
HNRNPU-208ENST00000475997 UTP11Q9Y3A2 253 aaKnown RBP6.76□□□□□ -1.33
HNRNPU-208ENST00000475997 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.76□□□□□ -1.33
HNRNPU-208ENST00000475997 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms