RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 XPNPEP3Q9NQH7 507 aa15.3■□□□□ 0.04
TRAF4-209ENST00000473421 PRDM6Q9NQX0 595 aa15.3■□□□□ 0.04
TRAF4-209ENST00000473421 ADAMTS5Q9UNA0 930 aa15.3■□□□□ 0.04
TRAF4-209ENST00000473421 TMX2Q9Y320 296 aa15.3■□□□□ 0.04
TRAF4-209ENST00000473421 APBB1O00213 710 aa15.29■□□□□ 0.04
TRAF4-209ENST00000473421 ZNF865P0CJ78 1059 aaPredicted RBP15.29■□□□□ 0.04
TRAF4-209ENST00000473421 ZNF792Q3KQV3 632 aa15.29■□□□□ 0.04
TRAF4-209ENST00000473421 TMEM179Q6ZVK1 233 aa15.29■□□□□ 0.04
TRAF4-209ENST00000473421 CERS3Q8IU89 383 aa15.29■□□□□ 0.04
TRAF4-209ENST00000473421 ABRAQ8N0Z2 381 aa15.29■□□□□ 0.04
TRAF4-209ENST00000473421 CRNKL1Q9BZJ0 848 aaKnown RBP15.29■□□□□ 0.04
TRAF4-209ENST00000473421 VCPKMTQ9H867 229 aa15.29■□□□□ 0.04
TRAF4-209ENST00000473421 A0A1W2PQ45 241 aaPredicted RBP15.28■□□□□ 0.04
TRAF4-209ENST00000473421 A0A1W2PQY0 241 aa15.28■□□□□ 0.04
TRAF4-209ENST00000473421 MYADML2A6NDP7 307 aa15.28■□□□□ 0.04
TRAF4-209ENST00000473421 PQBP1O60828 265 aaKnown RBP15.28■□□□□ 0.04
TRAF4-209ENST00000473421 CLTBP09497 229 aa15.28■□□□□ 0.04
TRAF4-209ENST00000473421 FCER1AP12319 257 aa15.28■□□□□ 0.04
TRAF4-209ENST00000473421 FOSL2P15408 326 aa15.28■□□□□ 0.04
TRAF4-209ENST00000473421 ICA1Q05084 483 aa15.28■□□□□ 0.04
TRAF4-209ENST00000473421 FAAP100Q0VG06 881 aa15.28■□□□□ 0.04
TRAF4-209ENST00000473421 REPS2Q8NFH8 660 aa15.28■□□□□ 0.04
TRAF4-209ENST00000473421 RHPN1Q8TCX5 695 aa15.28■□□□□ 0.04
TRAF4-209ENST00000473421 PANK1Q8TE04 598 aa15.28■□□□□ 0.04
TRAF4-209ENST00000473421 RNPC3Q96LT9 517 aaKnown RBP15.28■□□□□ 0.04
TRAF4-209ENST00000473421 DNAJC2Q99543 621 aaKnown RBP15.28■□□□□ 0.04
TRAF4-209ENST00000473421 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.28■□□□□ 0.04
TRAF4-209ENST00000473421 PLXNA1Q9UIW2 1896 aa15.28■□□□□ 0.04
TRAF4-209ENST00000473421 KIAA0355O15063 1070 aa15.27■□□□□ 0.04
TRAF4-209ENST00000473421 ADCY6O43306 1168 aa15.27■□□□□ 0.04
TRAF4-209ENST00000473421 ADAMTS4O75173 837 aa15.27■□□□□ 0.04
TRAF4-209ENST00000473421 EEF2P13639 858 aaKnown RBP15.27■□□□□ 0.04
TRAF4-209ENST00000473421 CDK8P49336 464 aa15.27■□□□□ 0.04
TRAF4-209ENST00000473421 C16orf59Q7L2K0 433 aa15.27■□□□□ 0.04
TRAF4-209ENST00000473421 MB21D1Q8N884 522 aa15.27■□□□□ 0.04
TRAF4-209ENST00000473421 MMP19Q99542 508 aa15.27■□□□□ 0.04
TRAF4-209ENST00000473421 TINF2Q9BSI4 451 aa15.27■□□□□ 0.04
TRAF4-209ENST00000473421 ZNF214Q9UL59 606 aaPredicted RBP15.27■□□□□ 0.04
TRAF4-209ENST00000473421 TACC3Q9Y6A5 838 aa15.27■□□□□ 0.04
TRAF4-209ENST00000473421 MYH8P13535 1937 aa15.26■□□□□ 0.03
TRAF4-209ENST00000473421 CHD9Q3L8U1 2897 aa15.26■□□□□ 0.03
TRAF4-209ENST00000473421 GRXCR1A8MXD5 290 aa15.26■□□□□ 0.03
TRAF4-209ENST00000473421 VWA5AO00534 786 aa15.26■□□□□ 0.03
TRAF4-209ENST00000473421 MBD4O95243 580 aa15.26■□□□□ 0.03
TRAF4-209ENST00000473421 RARBP10826 455 aa15.26■□□□□ 0.03
TRAF4-209ENST00000473421 PBX2P40425 430 aa15.26■□□□□ 0.03
TRAF4-209ENST00000473421 C12orf60Q5U649 245 aa15.26■□□□□ 0.03
TRAF4-209ENST00000473421 RIOX2Q8IUF8 465 aa15.26■□□□□ 0.03
TRAF4-209ENST00000473421 SIRT2Q8IXJ6 389 aa15.26■□□□□ 0.03
TRAF4-209ENST00000473421 NUP88Q99567 741 aaPredicted RBP15.26■□□□□ 0.03
TRAF4-209ENST00000473421 RIPK3Q9Y572 518 aa15.26■□□□□ 0.03
TRAF4-209ENST00000473421 USP17L12C9JPN9 530 aa15.25■□□□□ 0.03
TRAF4-209ENST00000473421 USP17L21D6R901 530 aa15.25■□□□□ 0.03
TRAF4-209ENST00000473421 SNAI1O95863 264 aaPredicted RBP15.25■□□□□ 0.03
TRAF4-209ENST00000473421 RAG1P15918 1043 aa15.25■□□□□ 0.03
TRAF4-209ENST00000473421 FAM83BQ5T0W9 1011 aa15.25■□□□□ 0.03
TRAF4-209ENST00000473421 CCSAPQ6IQ19 270 aaPredicted RBP15.25■□□□□ 0.03
TRAF4-209ENST00000473421 FTSJ3Q8IY81 847 aaKnown RBP15.25■□□□□ 0.03
TRAF4-209ENST00000473421 ARHGEF10LQ9HCE6 1279 aa15.25■□□□□ 0.03
TRAF4-209ENST00000473421 TMEM39AQ9NV64 488 aa15.25■□□□□ 0.03
TRAF4-209ENST00000473421 SLC5A4Q9NY91 659 aa15.25■□□□□ 0.03
TRAF4-209ENST00000473421 RAPGEFL1Q9UHV5 662 aa15.25■□□□□ 0.03
TRAF4-209ENST00000473421 CCER2I3L3R5 266 aa15.24■□□□□ 0.03
TRAF4-209ENST00000473421 WDR46O15213 610 aaKnown RBP15.24■□□□□ 0.03
TRAF4-209ENST00000473421 DNAJB2P25686 324 aa15.24■□□□□ 0.03
TRAF4-209ENST00000473421 ADD2P35612 726 aa15.24■□□□□ 0.03
TRAF4-209ENST00000473421 STAT3P40763 770 aa15.24■□□□□ 0.03
TRAF4-209ENST00000473421 ACLYP53396 1101 aa15.24■□□□□ 0.03
TRAF4-209ENST00000473421 TTF1Q15361 905 aaPredicted RBP15.24■□□□□ 0.03
TRAF4-209ENST00000473421 KLHDC9Q8NEP7 349 aa15.24■□□□□ 0.03
TRAF4-209ENST00000473421 FGD4Q96M96 766 aa15.24■□□□□ 0.03
TRAF4-209ENST00000473421 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.24■□□□□ 0.036e-8■■□□□ 12
TRAF4-209ENST00000473421 BOLA2Q9H3K6 86 aa15.24■□□□□ 0.03
TRAF4-209ENST00000473421 SWAP70Q9UH65 585 aa15.24■□□□□ 0.03
TRAF4-209ENST00000473421 REV3LO60673 3130 aa15.24■□□□□ 0.03
TRAF4-209ENST00000473421 SYNRGQ9UMZ2 1314 aa15.23■□□□□ 0.03
TRAF4-209ENST00000473421 SLC25A27O95847 323 aa15.23■□□□□ 0.03
TRAF4-209ENST00000473421 PTGS1P23219 599 aa15.23■□□□□ 0.03
TRAF4-209ENST00000473421 FPGSQ05932 587 aa15.23■□□□□ 0.03
TRAF4-209ENST00000473421 KCNA10Q16322 511 aa15.23■□□□□ 0.03
TRAF4-209ENST00000473421 CTR9Q6PD62 1173 aa15.23■□□□□ 0.03
TRAF4-209ENST00000473421 TMED8Q6PL24 325 aaPredicted RBP15.23■□□□□ 0.03
TRAF4-209ENST00000473421 C16orf86Q6ZW13 317 aa15.23■□□□□ 0.03
TRAF4-209ENST00000473421 ANKRD33Q7Z3H0 272 aa15.23■□□□□ 0.03
TRAF4-209ENST00000473421 RNF180Q86T96 592 aa15.23■□□□□ 0.03
TRAF4-209ENST00000473421 STK11IPQ8N1F8 1099 aa15.23■□□□□ 0.03
TRAF4-209ENST00000473421 NRBP1Q9UHY1 535 aa15.23■□□□□ 0.03
TRAF4-209ENST00000473421 PPP1R9AQ9ULJ8 1098 aa15.23■□□□□ 0.03
TRAF4-209ENST00000473421 CHD7Q9P2D1 2997 aa15.22■□□□□ 0.03
TRAF4-209ENST00000473421 MCM3APO60318 1980 aa15.22■□□□□ 0.03
TRAF4-209ENST00000473421 RAD21O60216 631 aa15.22■□□□□ 0.03
TRAF4-209ENST00000473421 KCTD2Q14681 263 aa15.22■□□□□ 0.03
TRAF4-209ENST00000473421 ERC1Q8IUD2 1116 aa15.22■□□□□ 0.03
TRAF4-209ENST00000473421 ZNF576Q9H609 170 aa15.22■□□□□ 0.03
TRAF4-209ENST00000473421 TBX21Q9UL17 535 aa15.22■□□□□ 0.03
TRAF4-209ENST00000473421 DIS3Q9Y2L1 958 aaKnown RBP15.22■□□□□ 0.03
TRAF4-209ENST00000473421 MYO9BQ13459 2157 aa15.22■□□□□ 0.03
TRAF4-209ENST00000473421 ROBO3Q96MS0 1386 aa15.22■□□□□ 0.03
TRAF4-209ENST00000473421 DNAJC25-GNG10A0A024R161 153 aa15.21■□□□□ 0.03
TRAF4-209ENST00000473421 ACRP10323 421 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 156.8 ms