RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 ZKSCAN3Q9BRR0 538 aa14.79□□□□□ -0.04
SPTLC1-204ENST00000469778 C22orf23Q9BZE7 217 aa14.79□□□□□ -0.04
SPTLC1-204ENST00000469778 ALDH8A1Q9H2A2 487 aaPredicted RBP14.79□□□□□ -0.04
SPTLC1-204ENST00000469778 RPAP3Q9H6T3 665 aaPredicted RBP14.79□□□□□ -0.04
SPTLC1-204ENST00000469778 FEM1BQ9UK73 627 aa14.79□□□□□ -0.04
SPTLC1-204ENST00000469778 PNMA2Q9UL42 364 aa14.79□□□□□ -0.04
SPTLC1-204ENST00000469778 TRPA1O75762 1119 aa14.78□□□□□ -0.04
SPTLC1-204ENST00000469778 SNHG28P0DPA3 235 aa14.78□□□□□ -0.04
SPTLC1-204ENST00000469778 RPS6KB1P23443 525 aa14.78□□□□□ -0.04
SPTLC1-204ENST00000469778 RCAN1P53805 252 aa14.78□□□□□ -0.04
SPTLC1-204ENST00000469778 ANTXR2P58335 489 aa14.78□□□□□ -0.04
SPTLC1-204ENST00000469778 ARHGEF6Q15052 776 aa14.78□□□□□ -0.04
SPTLC1-204ENST00000469778 ZYXQ15942 572 aaKnown RBP14.78□□□□□ -0.04
SPTLC1-204ENST00000469778 SYNE3Q6ZMZ3 975 aa14.78□□□□□ -0.04
SPTLC1-204ENST00000469778 LRRC47Q8N1G4 583 aaKnown RBP14.78□□□□□ -0.04
SPTLC1-204ENST00000469778 PRPF38AQ8NAV1 312 aaKnown RBP14.78□□□□□ -0.04
SPTLC1-204ENST00000469778 SMCR8Q8TEV9 937 aaPredicted RBP14.78□□□□□ -0.04
SPTLC1-204ENST00000469778 TANGO6Q9C0B7 1094 aa14.78□□□□□ -0.04
SPTLC1-204ENST00000469778 ASCC2Q9H1I8 757 aaPredicted RBP14.78□□□□□ -0.04
SPTLC1-204ENST00000469778 CCDC69A6NI79 296 aa14.77□□□□□ -0.05
SPTLC1-204ENST00000469778 SH2B2O14492 632 aaPredicted RBP14.77□□□□□ -0.05
SPTLC1-204ENST00000469778 RAD21O60216 631 aa14.77□□□□□ -0.05
SPTLC1-204ENST00000469778 DDAH1O94760 285 aa14.77□□□□□ -0.05
SPTLC1-204ENST00000469778 CASTP20810 708 aaKnown RBP14.77□□□□□ -0.05
SPTLC1-204ENST00000469778 KIF5BP33176 963 aa14.77□□□□□ -0.05
SPTLC1-204ENST00000469778 FGD1P98174 961 aa14.77□□□□□ -0.05
SPTLC1-204ENST00000469778 ASPRV1Q53RT3 343 aa14.77□□□□□ -0.05
SPTLC1-204ENST00000469778 SPICE1Q8N0Z3 855 aa14.77□□□□□ -0.05
SPTLC1-204ENST00000469778 LY9Q9HBG7 655 aa14.77□□□□□ -0.05
SPTLC1-204ENST00000469778 ADAMTS5Q9UNA0 930 aa14.77□□□□□ -0.05
SPTLC1-204ENST00000469778 RABGAP1Q9Y3P9 1069 aa14.77□□□□□ -0.05
SPTLC1-204ENST00000469778 SLC12A7Q9Y666 1083 aa14.77□□□□□ -0.05
SPTLC1-204ENST00000469778 CEP350Q5VT06 3117 aa14.77□□□□□ -0.05
SPTLC1-204ENST00000469778 FLOT1O75955 427 aa14.76□□□□□ -0.05
SPTLC1-204ENST00000469778 PDHBP11177 359 aa14.76□□□□□ -0.05
SPTLC1-204ENST00000469778 SMARCA1P28370 1054 aa14.76□□□□□ -0.05
SPTLC1-204ENST00000469778 DSG3P32926 999 aa14.76□□□□□ -0.05
SPTLC1-204ENST00000469778 GNAQP50148 359 aa14.76□□□□□ -0.05
SPTLC1-204ENST00000469778 STAT2P52630 851 aa14.76□□□□□ -0.05
SPTLC1-204ENST00000469778 HERVK_113P62684 666 aa14.76□□□□□ -0.05
SPTLC1-204ENST00000469778 CRHR2Q13324 411 aa14.76□□□□□ -0.05
SPTLC1-204ENST00000469778 ANKRD1Q15327 319 aa14.76□□□□□ -0.05
SPTLC1-204ENST00000469778 BTNL9Q6UXG8 535 aa14.76□□□□□ -0.05
SPTLC1-204ENST00000469778 NFXL1Q6ZNB6 911 aa14.76□□□□□ -0.05
SPTLC1-204ENST00000469778 CHST3Q7LGC8 479 aa14.76□□□□□ -0.05
SPTLC1-204ENST00000469778 NKX2-3Q8TAU0 364 aa14.76□□□□□ -0.05
SPTLC1-204ENST00000469778 P2RX7Q99572 595 aaKnown RBP14.76□□□□□ -0.05
SPTLC1-204ENST00000469778 LZTS2Q9BRK4 669 aa14.76□□□□□ -0.05
SPTLC1-204ENST00000469778 AGXT2Q9BYV1 514 aa14.76□□□□□ -0.05
SPTLC1-204ENST00000469778 LOC285556D6RIA3 1793 aa14.75□□□□□ -0.05
SPTLC1-204ENST00000469778 PTPRFP10586 1907 aa14.75□□□□□ -0.05
SPTLC1-204ENST00000469778 PARP1P09874 1014 aaKnown RBP14.75□□□□□ -0.05
SPTLC1-204ENST00000469778 CTCFP49711 727 aaPredicted RBP14.75□□□□□ -0.05
SPTLC1-204ENST00000469778 OAZ1P54368 228 aa14.75□□□□□ -0.05
SPTLC1-204ENST00000469778 EVCP57679 992 aa14.75□□□□□ -0.05
SPTLC1-204ENST00000469778 ZNF543Q08ER8 600 aa14.75□□□□□ -0.05
SPTLC1-204ENST00000469778 TROAPQ12815 778 aa14.75□□□□□ -0.05
SPTLC1-204ENST00000469778 KIAA1755Q5JYT7 1200 aa14.75□□□□□ -0.05
SPTLC1-204ENST00000469778 FAM83BQ5T0W9 1011 aa14.75□□□□□ -0.05
SPTLC1-204ENST00000469778 C17orf99Q6UX52 265 aa14.75□□□□□ -0.05
SPTLC1-204ENST00000469778 GPRC5AQ8NFJ5 357 aa14.75□□□□□ -0.05
SPTLC1-204ENST00000469778 SLF1Q9BQI6 1058 aa14.75□□□□□ -0.05
SPTLC1-204ENST00000469778 MORF4L1Q9UBU8 362 aa14.75□□□□□ -0.05
SPTLC1-204ENST00000469778 PPP1R9AQ9ULJ8 1098 aa14.75□□□□□ -0.05
SPTLC1-204ENST00000469778 CCDC196A0A1B0GTZ2 297 aa14.74□□□□□ -0.05
SPTLC1-204ENST00000469778 TMEM232C9JQI7 657 aa14.74□□□□□ -0.05
SPTLC1-204ENST00000469778 GNRH1P01148 92 aa14.74□□□□□ -0.05
SPTLC1-204ENST00000469778 CYP2C8P10632 490 aa14.74□□□□□ -0.05
SPTLC1-204ENST00000469778 COPB2P35606 906 aa14.74□□□□□ -0.05
SPTLC1-204ENST00000469778 CCNA1P78396 465 aa14.74□□□□□ -0.05
SPTLC1-204ENST00000469778 TRAF1Q13077 416 aa14.74□□□□□ -0.05
SPTLC1-204ENST00000469778 FAM110CQ1W6H9 321 aa14.74□□□□□ -0.05
SPTLC1-204ENST00000469778 ZNF654Q8IZM8 581 aa14.74□□□□□ -0.05
SPTLC1-204ENST00000469778 CTCFLQ8NI51 663 aaPredicted RBP14.74□□□□□ -0.05
SPTLC1-204ENST00000469778 CHMP4CQ96CF2 233 aa14.74□□□□□ -0.05
SPTLC1-204ENST00000469778 PDRG1Q9NUG6 133 aa14.74□□□□□ -0.05
SPTLC1-204ENST00000469778 ADGRA2Q96PE1 1338 aa14.73□□□□□ -0.05
SPTLC1-204ENST00000469778 PALM3A6NDB9 673 aaPredicted RBP14.73□□□□□ -0.05
SPTLC1-204ENST00000469778 SPDYE16A6NNV3 312 aaPredicted RBP14.73□□□□□ -0.05
SPTLC1-204ENST00000469778 GPR25O00155 361 aa14.73□□□□□ -0.05
SPTLC1-204ENST00000469778 ATP2A1O14983 1001 aa14.73□□□□□ -0.05
SPTLC1-204ENST00000469778 ZBED4O75132 1171 aa14.73□□□□□ -0.05
SPTLC1-204ENST00000469778 TBC1D8O95759 1140 aa14.73□□□□□ -0.05
SPTLC1-204ENST00000469778 BCRP11274 1271 aa14.73□□□□□ -0.05
SPTLC1-204ENST00000469778 SP3Q02447 781 aa14.73□□□□□ -0.05
SPTLC1-204ENST00000469778 DGKZQ13574 1117 aa14.73□□□□□ -0.05
SPTLC1-204ENST00000469778 KIF22Q14807 665 aa14.73□□□□□ -0.05
SPTLC1-204ENST00000469778 GRM4Q14833 912 aa14.73□□□□□ -0.05
SPTLC1-204ENST00000469778 CCDC96Q2M329 555 aa14.73□□□□□ -0.05
SPTLC1-204ENST00000469778 Q6ZUG5 572 aa14.73□□□□□ -0.05
SPTLC1-204ENST00000469778 CTDP1Q9Y5B0 961 aaPredicted RBP14.73□□□□□ -0.05
SPTLC1-204ENST00000469778 MYH4Q9Y623 1939 aa14.72□□□□□ -0.05
SPTLC1-204ENST00000469778 VWA5AO00534 786 aa14.72□□□□□ -0.05
SPTLC1-204ENST00000469778 FKTNO75072 461 aa14.72□□□□□ -0.05
SPTLC1-204ENST00000469778 HSPA1AP0DMV8 641 aaKnown RBP14.72□□□□□ -0.05
SPTLC1-204ENST00000469778 HSPA1BP0DMV9 641 aaKnown RBP14.72□□□□□ -0.05
SPTLC1-204ENST00000469778 IKQ13123 557 aaPredicted RBP14.72□□□□□ -0.05
SPTLC1-204ENST00000469778 RABEP1Q15276 862 aa14.72□□□□□ -0.05
SPTLC1-204ENST00000469778 FANCBQ8NB91 859 aa14.72□□□□□ -0.05
SPTLC1-204ENST00000469778 ZNF274Q96GC6 653 aaPredicted RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms