RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 LETM2Q2VYF4 491 aa20.22■□□□□ 0.83
MCF2L-221ENST00000469415 MNS1Q8NEH6 495 aa20.22■□□□□ 0.83
MCF2L-221ENST00000469415 LRP5O75197 1615 aa20.22■□□□□ 0.83
MCF2L-221ENST00000469415 N4BP3O15049 544 aa20.21■□□□□ 0.83
MCF2L-221ENST00000469415 ORC4O43929 436 aa20.21■□□□□ 0.83
MCF2L-221ENST00000469415 ZNF18P17022 549 aa20.21■□□□□ 0.83
MCF2L-221ENST00000469415 STAT6P42226 847 aa20.21■□□□□ 0.83
MCF2L-221ENST00000469415 PPFIBP1Q86W92 1011 aa20.21■□□□□ 0.83
MCF2L-221ENST00000469415 AMOTL1Q8IY63 956 aa20.21■□□□□ 0.83
MCF2L-221ENST00000469415 TEX11Q8IYF3 940 aa20.21■□□□□ 0.83
MCF2L-221ENST00000469415 IQUBQ8NA54 791 aa20.21■□□□□ 0.83
MCF2L-221ENST00000469415 TNFRSF25Q93038 417 aa20.21■□□□□ 0.83
MCF2L-221ENST00000469415 TMEM47Q9BQJ4 181 aa20.21■□□□□ 0.83
MCF2L-221ENST00000469415 FRMPD2Q68DX3 1309 aaPredicted RBP20.21■□□□□ 0.83
MCF2L-221ENST00000469415 ARHGAP29Q52LW3 1261 aa20.21■□□□□ 0.83
MCF2L-221ENST00000469415 WWC2Q6AWC2 1192 aa20.21■□□□□ 0.83
MCF2L-221ENST00000469415 REXO1L1PQ8IX06 675 aa20.21■□□□□ 0.83
MCF2L-221ENST00000469415 CNTNAP4Q9C0A0 1308 aa20.21■□□□□ 0.83
MCF2L-221ENST00000469415 PSDA5PKW4 1024 aaPredicted RBP20.21■□□□□ 0.83
MCF2L-221ENST00000469415 CASP14P31944 242 aa20.21■□□□□ 0.83
MCF2L-221ENST00000469415 ATP2C1P98194 919 aaPredicted RBP20.21■□□□□ 0.83
MCF2L-221ENST00000469415 MFSD14BQ5SR56 506 aa20.21■□□□□ 0.83
MCF2L-221ENST00000469415 FERMT2Q96AC1 680 aa20.21■□□□□ 0.83
MCF2L-221ENST00000469415 KLRF2D3W0D1 207 aa20.2■□□□□ 0.82
MCF2L-221ENST00000469415 BAG3O95817 575 aa20.2■□□□□ 0.82
MCF2L-221ENST00000469415 TFRCP02786 760 aaKnown RBP20.2■□□□□ 0.82
MCF2L-221ENST00000469415 PPP2R5BQ15173 497 aa20.2■□□□□ 0.82
MCF2L-221ENST00000469415 JAKMIP3Q5VZ66 844 aa20.2■□□□□ 0.82
MCF2L-221ENST00000469415 SPTY2D1Q68D10 685 aaPredicted RBP20.2■□□□□ 0.82
MCF2L-221ENST00000469415 ST7Q9NRC1 585 aa20.2■□□□□ 0.82
MCF2L-221ENST00000469415 ZNF219Q9P2Y4 722 aaPredicted RBP20.2■□□□□ 0.82
MCF2L-221ENST00000469415 CHD4Q14839 1912 aa20.19■□□□□ 0.82
MCF2L-221ENST00000469415 PPP1R3GB7ZBB8 358 aa20.19■□□□□ 0.82
MCF2L-221ENST00000469415 SEMA3EO15041 775 aa20.19■□□□□ 0.82
MCF2L-221ENST00000469415 NAPAP54920 295 aa20.19■□□□□ 0.82
MCF2L-221ENST00000469415 GRAPQ13588 217 aa20.19■□□□□ 0.82
MCF2L-221ENST00000469415 PRR5LQ6MZQ0 368 aa20.19■□□□□ 0.82
MCF2L-221ENST00000469415 TMEM139Q8IV31 216 aa20.19■□□□□ 0.82
MCF2L-221ENST00000469415 GRAPLQ8TC17 118 aaPredicted RBP20.19■□□□□ 0.82
MCF2L-221ENST00000469415 ERO1AQ96HE7 468 aa20.19■□□□□ 0.82
MCF2L-221ENST00000469415 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.19■□□□□ 0.82
MCF2L-221ENST00000469415 MAPK8IP2Q13387 824 aaPredicted RBP20.19■□□□□ 0.82
MCF2L-221ENST00000469415 SPATA1Q5VX52 437 aa20.19■□□□□ 0.82
MCF2L-221ENST00000469415 TRIM65Q6PJ69 517 aa20.19■□□□□ 0.82
MCF2L-221ENST00000469415 WDR66Q8TBY9 1149 aa20.19■□□□□ 0.82
MCF2L-221ENST00000469415 HPS3Q969F9 1004 aa20.19■□□□□ 0.82
MCF2L-221ENST00000469415 EYA3Q99504 573 aa20.19■□□□□ 0.82
MCF2L-221ENST00000469415 MTA3Q9BTC8 594 aa20.19■□□□□ 0.82
MCF2L-221ENST00000469415 MRPL44Q9H9J2 332 aaKnown RBP20.19■□□□□ 0.82
MCF2L-221ENST00000469415 UBA7P41226 1012 aa20.19■□□□□ 0.82
MCF2L-221ENST00000469415 GTF2IP78347 998 aa20.19■□□□□ 0.82
MCF2L-221ENST00000469415 ZNF804AQ7Z570 1209 aa20.19■□□□□ 0.82
MCF2L-221ENST00000469415 LRRC47Q8N1G4 583 aaKnown RBP20.19■□□□□ 0.82
MCF2L-221ENST00000469415 BIN2Q9UBW5 565 aaPredicted RBP20.19■□□□□ 0.82
MCF2L-221ENST00000469415 ARHGAP6O43182 974 aa20.18■□□□□ 0.82
MCF2L-221ENST00000469415 RCAN1P53805 252 aa20.18■□□□□ 0.82
MCF2L-221ENST00000469415 NT5DC1Q5TFE4 455 aa20.18■□□□□ 0.82
MCF2L-221ENST00000469415 CD209Q9NNX6 404 aa20.18■□□□□ 0.82
MCF2L-221ENST00000469415 MAD2L2Q9UI95 211 aa20.18■□□□□ 0.82
MCF2L-221ENST00000469415 UTRNP46939 3433 aa20.18■□□□□ 0.82
MCF2L-221ENST00000469415 CACNA1SQ13698 1873 aa20.18■□□□□ 0.82
MCF2L-221ENST00000469415 ABL1P00519 1130 aa20.18■□□□□ 0.82
MCF2L-221ENST00000469415 FGRP09769 529 aa20.18■□□□□ 0.82
MCF2L-221ENST00000469415 NR1I3Q14994 352 aa20.18■□□□□ 0.82
MCF2L-221ENST00000469415 VPS72Q15906 364 aa20.18■□□□□ 0.82
MCF2L-221ENST00000469415 TEX35Q5T0J7 233 aa20.18■□□□□ 0.82
MCF2L-221ENST00000469415 NELFBQ8WX92 580 aa20.18■□□□□ 0.82
MCF2L-221ENST00000469415 CGNQ9P2M7 1197 aaKnown RBP20.18■□□□□ 0.82
MCF2L-221ENST00000469415 AKR1B15C9JRZ8 316 aaPredicted RBP20.17■□□□□ 0.82
MCF2L-221ENST00000469415 SCNN1DP51172 638 aa20.17■□□□□ 0.82
MCF2L-221ENST00000469415 DTHD1Q6ZMT9 781 aa20.17■□□□□ 0.82
MCF2L-221ENST00000469415 UBXN4Q92575 508 aa20.17■□□□□ 0.82
MCF2L-221ENST00000469415 RNF225M0QZC1 329 aaPredicted RBP20.17■□□□□ 0.82
MCF2L-221ENST00000469415 CCNT1O60563 726 aaKnown RBP20.17■□□□□ 0.82
MCF2L-221ENST00000469415 RASA1P20936 1047 aa20.17■□□□□ 0.82
MCF2L-221ENST00000469415 FXR1P51114 621 aaKnown RBP eCLIP20.17■□□□□ 0.82
MCF2L-221ENST00000469415 CCDC12Q8WUD4 166 aaPredicted RBP20.17■□□□□ 0.82
MCF2L-221ENST00000469415 GJA10Q969M2 543 aa20.17■□□□□ 0.82
MCF2L-221ENST00000469415 NUP88Q99567 741 aaPredicted RBP20.17■□□□□ 0.82
MCF2L-221ENST00000469415 NID2Q14112 1375 aa20.17■□□□□ 0.82
MCF2L-221ENST00000469415 ECM29Q5VYK3 1845 aa20.16■□□□□ 0.82
MCF2L-221ENST00000469415 ZSCAN12O43309 604 aa20.16■□□□□ 0.82
MCF2L-221ENST00000469415 CDK8P49336 464 aa20.16■□□□□ 0.82
MCF2L-221ENST00000469415 RAD9BQ6WBX8 426 aa20.16■□□□□ 0.82
MCF2L-221ENST00000469415 ACRBPQ8NEB7 543 aa20.16■□□□□ 0.82
MCF2L-221ENST00000469415 TMEM260Q9NX78 707 aa20.16■□□□□ 0.82
MCF2L-221ENST00000469415 PCDHA4Q9UN74 947 aa20.16■□□□□ 0.82
MCF2L-221ENST00000469415 TFR2Q9UP52 801 aa20.16■□□□□ 0.82
MCF2L-221ENST00000469415 CASQ1P31415 396 aa20.16■□□□□ 0.82
MCF2L-221ENST00000469415 PRCPP42785 496 aa20.16■□□□□ 0.82
MCF2L-221ENST00000469415 PIGSQ96S52 555 aa20.16■□□□□ 0.82
MCF2L-221ENST00000469415 GPCPD1Q9NPB8 672 aa20.16■□□□□ 0.82
MCF2L-221ENST00000469415 PCDHA6Q9UN73 950 aa20.16■□□□□ 0.82
MCF2L-221ENST00000469415 PCDHA8Q9Y5H6 950 aa20.16■□□□□ 0.82
MCF2L-221ENST00000469415 SERPINB2P05120 415 aa20.16■□□□□ 0.82
MCF2L-221ENST00000469415 TXLNAP40222 546 aa20.16■□□□□ 0.82
MCF2L-221ENST00000469415 KRT31Q15323 416 aa20.16■□□□□ 0.82
MCF2L-221ENST00000469415 DOK7Q18PE1 504 aa20.16■□□□□ 0.82
MCF2L-221ENST00000469415 FILIP1LQ4L180 1135 aa20.16■□□□□ 0.82
MCF2L-221ENST00000469415 TRIML1Q8N9V2 468 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 185.3 ms