RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 TCP11X2Q5H9J9 407 aa14.66□□□□□ -0.06
PDZRN3-205ENST00000466780 TTC38Q5R3I4 469 aa14.66□□□□□ -0.06
PDZRN3-205ENST00000466780 KCNJ18B7U540 433 aa14.66□□□□□ -0.06
PDZRN3-205ENST00000466780 STARD3NLO95772 234 aa14.66□□□□□ -0.06
PDZRN3-205ENST00000466780 XBP1P17861 261 aa14.66□□□□□ -0.06
PDZRN3-205ENST00000466780 PAK1Q13153 545 aa14.66□□□□□ -0.06
PDZRN3-205ENST00000466780 KCNJ12Q14500 433 aa14.66□□□□□ -0.06
PDZRN3-205ENST00000466780 TRAPPC11Q7Z392 1133 aa14.66□□□□□ -0.06
PDZRN3-205ENST00000466780 ENAHQ8N8S7 591 aaPredicted RBP14.66□□□□□ -0.06
PDZRN3-205ENST00000466780 EPN1Q9Y6I3 576 aaPredicted RBP14.66□□□□□ -0.06
PDZRN3-205ENST00000466780 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.66□□□□□ -0.06
PDZRN3-205ENST00000466780 RTL9Q8NET4 1388 aa14.66□□□□□ -0.06
PDZRN3-205ENST00000466780 MINDY4BA8MYZ0 360 aa14.65□□□□□ -0.06
PDZRN3-205ENST00000466780 BMP15O95972 392 aa14.65□□□□□ -0.06
PDZRN3-205ENST00000466780 TUBBP07437 444 aa14.65□□□□□ -0.06
PDZRN3-205ENST00000466780 IVLP07476 585 aa14.65□□□□□ -0.06
PDZRN3-205ENST00000466780 BCAMP50895 628 aa14.65□□□□□ -0.06
PDZRN3-205ENST00000466780 IL17AQ16552 155 aa14.65□□□□□ -0.06
PDZRN3-205ENST00000466780 ADGRA1Q86SQ6 560 aa14.65□□□□□ -0.06
PDZRN3-205ENST00000466780 SDR42E1Q8WUS8 393 aa14.65□□□□□ -0.06
PDZRN3-205ENST00000466780 NELFBQ8WX92 580 aa14.65□□□□□ -0.06
PDZRN3-205ENST00000466780 HDAC6Q9UBN7 1215 aa14.65□□□□□ -0.06
PDZRN3-205ENST00000466780 GUCA1BQ9UMX6 200 aa14.65□□□□□ -0.06
PDZRN3-205ENST00000466780 ANKRD36CQ5JPF3 1778 aa14.65□□□□□ -0.06
PDZRN3-205ENST00000466780 NDUFA10O95299 355 aa14.65□□□□□ -0.06
PDZRN3-205ENST00000466780 SPAG1Q07617 926 aa14.65□□□□□ -0.06
PDZRN3-205ENST00000466780 TRIM14Q14142 442 aa14.65□□□□□ -0.06
PDZRN3-205ENST00000466780 RSPH14Q9UHP6 348 aa14.65□□□□□ -0.06
PDZRN3-205ENST00000466780 MYH2Q9UKX2 1941 aa14.65□□□□□ -0.06
PDZRN3-205ENST00000466780 ZNF335Q9H4Z2 1342 aaPredicted RBP14.65□□□□□ -0.06
PDZRN3-205ENST00000466780 ENC1O14682 589 aa14.65□□□□□ -0.07
PDZRN3-205ENST00000466780 GTPBP6O43824 516 aaPredicted RBP14.65□□□□□ -0.07
PDZRN3-205ENST00000466780 PPP2R5BQ15173 497 aa14.65□□□□□ -0.07
PDZRN3-205ENST00000466780 HSP90B2PQ58FF3 399 aa14.65□□□□□ -0.07
PDZRN3-205ENST00000466780 IRF2BP1Q8IU81 584 aa14.65□□□□□ -0.07
PDZRN3-205ENST00000466780 TFR2Q9UP52 801 aa14.65□□□□□ -0.07
PDZRN3-205ENST00000466780 GDAQ9Y2T3 454 aa14.65□□□□□ -0.07
PDZRN3-205ENST00000466780 TTC26A0AVF1 554 aa14.64□□□□□ -0.07
PDZRN3-205ENST00000466780 PSMD14O00487 310 aa14.64□□□□□ -0.07
PDZRN3-205ENST00000466780 USP14P54578 494 aa14.64□□□□□ -0.07
PDZRN3-205ENST00000466780 LRRC31Q6UY01 552 aa14.64□□□□□ -0.07
PDZRN3-205ENST00000466780 ESR2Q92731 530 aa14.64□□□□□ -0.07
PDZRN3-205ENST00000466780 MMS19Q96T76 1030 aa14.64□□□□□ -0.07
PDZRN3-205ENST00000466780 FAM204AQ9H8W3 233 aa14.64□□□□□ -0.07
PDZRN3-205ENST00000466780 MED4Q9NPJ6 270 aa14.64□□□□□ -0.07
PDZRN3-205ENST00000466780 RNF216Q9NWF9 866 aaPredicted RBP14.64□□□□□ -0.07
PDZRN3-205ENST00000466780 MAPK8IP1Q9UQF2 711 aa14.64□□□□□ -0.07
PDZRN3-205ENST00000466780 PLCH1Q4KWH8 1693 aa14.64□□□□□ -0.07
PDZRN3-205ENST00000466780 ADAMTS3O15072 1205 aa14.64□□□□□ -0.07
PDZRN3-205ENST00000466780 SYF2O95926 243 aaKnown RBP14.64□□□□□ -0.07
PDZRN3-205ENST00000466780 HERVK_113P62684 666 aa14.64□□□□□ -0.07
PDZRN3-205ENST00000466780 UBXN1Q04323 297 aa14.64□□□□□ -0.07
PDZRN3-205ENST00000466780 ZNF658Q5TYW1 1059 aaPredicted RBP14.64□□□□□ -0.07
PDZRN3-205ENST00000466780 SLC4A9Q96Q91 983 aa14.64□□□□□ -0.07
PDZRN3-205ENST00000466780 SLIT2O94813 1529 aa14.63□□□□□ -0.07
PDZRN3-205ENST00000466780 MYH13Q9UKX3 1938 aa14.63□□□□□ -0.07
PDZRN3-205ENST00000466780 ZC3H4Q9UPT8 1303 aaKnown RBP14.63□□□□□ -0.07
PDZRN3-205ENST00000466780 DISP2A7MBM2 1401 aa14.63□□□□□ -0.07
PDZRN3-205ENST00000466780 ATP1A1P05023 1023 aaKnown RBP14.63□□□□□ -0.07
PDZRN3-205ENST00000466780 CCDC148Q8NFR7 591 aa14.63□□□□□ -0.07
PDZRN3-205ENST00000466780 ZSCAN10Q96SZ4 725 aaPredicted RBP14.63□□□□□ -0.07
PDZRN3-205ENST00000466780 BTG4Q9NY30 223 aa14.63□□□□□ -0.07
PDZRN3-205ENST00000466780 ANAPC4Q9UJX5 808 aa14.63□□□□□ -0.07
PDZRN3-205ENST00000466780 SRGAP2O75044 1071 aa14.63□□□□□ -0.07
PDZRN3-205ENST00000466780 PRPF6O94906 941 aaKnown RBP14.63□□□□□ -0.07
PDZRN3-205ENST00000466780 PRCPP42785 496 aa14.63□□□□□ -0.07
PDZRN3-205ENST00000466780 AARSP49588 968 aaKnown RBP eCLIP14.63□□□□□ -0.07
PDZRN3-205ENST00000466780 TROAPQ12815 778 aa14.63□□□□□ -0.07
PDZRN3-205ENST00000466780 VIPAS39Q9H9C1 493 aa14.63□□□□□ -0.07
PDZRN3-205ENST00000466780 LRP2BPQ9P2M1 347 aa14.63□□□□□ -0.07
PDZRN3-205ENST00000466780 ZBTB1Q9Y2K1 713 aa14.63□□□□□ -0.07
PDZRN3-205ENST00000466780 NUP98P52948 1817 aa14.62□□□□□ -0.07
PDZRN3-205ENST00000466780 CYP2D7A0A087X1C5 515 aa14.62□□□□□ -0.07
PDZRN3-205ENST00000466780 TRIM49BA6NDI0 452 aa14.62□□□□□ -0.07
PDZRN3-205ENST00000466780 RNF40O75150 1001 aa14.62□□□□□ -0.07
PDZRN3-205ENST00000466780 CYP7A1P22680 504 aa14.62□□□□□ -0.07
PDZRN3-205ENST00000466780 WDR59Q6PJI9 974 aa14.62□□□□□ -0.07
PDZRN3-205ENST00000466780 ANKRD20A12PQ8NF67 263 aa14.62□□□□□ -0.07
PDZRN3-205ENST00000466780 OR8K1Q8NGG5 319 aa14.62□□□□□ -0.07
PDZRN3-205ENST00000466780 DNAJC7Q99615 494 aa14.62□□□□□ -0.07
PDZRN3-205ENST00000466780 HAUS4Q9H6D7 363 aa14.62□□□□□ -0.07
PDZRN3-205ENST00000466780 BAZ2BQ9UIF8 2168 aaKnown RBP14.62□□□□□ -0.07
PDZRN3-205ENST00000466780 A0A0G2JS52 829 aa14.62□□□□□ -0.07
PDZRN3-205ENST00000466780 RPN1P04843 607 aaKnown RBP14.62□□□□□ -0.07
PDZRN3-205ENST00000466780 PARP1P09874 1014 aaKnown RBP14.62□□□□□ -0.07
PDZRN3-205ENST00000466780 CYP19A1P11511 503 aaPredicted RBP14.62□□□□□ -0.07
PDZRN3-205ENST00000466780 MB21D1Q8N884 522 aa14.62□□□□□ -0.07
PDZRN3-205ENST00000466780 ACBD3Q9H3P7 528 aa14.62□□□□□ -0.07
PDZRN3-205ENST00000466780 BRMS1Q9HCU9 246 aa14.62□□□□□ -0.07
PDZRN3-205ENST00000466780 HPCAL4Q9UM19 191 aa14.62□□□□□ -0.07
PDZRN3-205ENST00000466780 NHSL1Q5SYE7 1610 aa14.61□□□□□ -0.07
PDZRN3-205ENST00000466780 PMS1P54277 932 aaKnown RBP14.61□□□□□ -0.07
PDZRN3-205ENST00000466780 IFIT1BQ5T764 474 aaKnown RBP14.61□□□□□ -0.07
PDZRN3-205ENST00000466780 PAPD7Q5XG87 772 aaKnown RBP14.61□□□□□ -0.07
PDZRN3-205ENST00000466780 PIK3AP1Q6ZUJ8 805 aa14.61□□□□□ -0.07
PDZRN3-205ENST00000466780 TMTC3Q6ZXV5 915 aa14.61□□□□□ -0.07
PDZRN3-205ENST00000466780 CATIPQ7Z7H3 387 aa14.61□□□□□ -0.07
PDZRN3-205ENST00000466780 CNTNAP5Q8WYK1 1306 aa14.61□□□□□ -0.07
PDZRN3-205ENST00000466780 VEGFAP15692 232 aaPredicted RBP14.61□□□□□ -0.07
PDZRN3-205ENST00000466780 MCM7P33993 719 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms