RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 ST14Q9Y5Y6 855 aa6.37□□□□□ -1.39
LINC00393-202ENST00000452852 CUL7Q14999 1698 aa6.36□□□□□ -1.39
LINC00393-202ENST00000452852 RUSC2Q8N2Y8 1516 aa6.36□□□□□ -1.39
LINC00393-202ENST00000452852 H3BS24 57 aa6.36□□□□□ -1.39
LINC00393-202ENST00000452852 FUT4P22083 530 aa6.36□□□□□ -1.39
LINC00393-202ENST00000452852 TNK2Q07912 1038 aa6.36□□□□□ -1.39
LINC00393-202ENST00000452852 MLECQ14165 292 aa6.36□□□□□ -1.39
LINC00393-202ENST00000452852 ARSHQ5FYA8 562 aa6.36□□□□□ -1.39
LINC00393-202ENST00000452852 LCE4AQ5TA78 99 aa6.36□□□□□ -1.39
LINC00393-202ENST00000452852 OGFOD2Q6N063 350 aa6.36□□□□□ -1.39
LINC00393-202ENST00000452852 CBLL1Q75N03 491 aa6.36□□□□□ -1.39
LINC00393-202ENST00000452852 REXO1Q8N1G1 1221 aaKnown RBP6.36□□□□□ -1.39
LINC00393-202ENST00000452852 PMFBP1Q8TBY8 1022 aa6.36□□□□□ -1.39
LINC00393-202ENST00000452852 CCDC74BQ96LY2 380 aa6.36□□□□□ -1.39
LINC00393-202ENST00000452852 Q96M66 194 aa6.36□□□□□ -1.39
LINC00393-202ENST00000452852 KIF2CQ99661 725 aa6.36□□□□□ -1.39
LINC00393-202ENST00000452852 ZNF165P49910 485 aa6.35□□□□□ -1.39
LINC00393-202ENST00000452852 ARID5AQ03989 594 aa6.35□□□□□ -1.39
LINC00393-202ENST00000452852 IKZF1Q13422 519 aa6.35□□□□□ -1.39
LINC00393-202ENST00000452852 ZNF792Q3KQV3 632 aa6.35□□□□□ -1.39
LINC00393-202ENST00000452852 CCDC144BQ3MJ40 725 aa6.35□□□□□ -1.39
LINC00393-202ENST00000452852 ANGEL2Q5VTE6 544 aaKnown RBP6.35□□□□□ -1.39
LINC00393-202ENST00000452852 GMLQ99445 158 aa6.35□□□□□ -1.39
LINC00393-202ENST00000452852 ATP13A1Q9HD20 1204 aa6.35□□□□□ -1.39
LINC00393-202ENST00000452852 GMIPQ9P107 970 aa6.35□□□□□ -1.39
LINC00393-202ENST00000452852 KIF13AQ9H1H9 1805 aa6.34□□□□□ -1.39
LINC00393-202ENST00000452852 PPM1GO15355 546 aaPredicted RBP6.34□□□□□ -1.39
LINC00393-202ENST00000452852 LRRN2O75325 713 aa6.34□□□□□ -1.39
LINC00393-202ENST00000452852 CANXP27824 592 aaKnown RBP6.34□□□□□ -1.39
LINC00393-202ENST00000452852 GBP1P32455 592 aa6.34□□□□□ -1.39
LINC00393-202ENST00000452852 OVOS1Q6IE37 1185 aa6.34□□□□□ -1.39
LINC00393-202ENST00000452852 PI4K2BQ8TCG2 481 aa6.34□□□□□ -1.39
LINC00393-202ENST00000452852 UBE2FQ969M7 185 aa6.34□□□□□ -1.39
LINC00393-202ENST00000452852 ANTXR1Q9H6X2 564 aa6.34□□□□□ -1.39
LINC00393-202ENST00000452852 PRDM7Q9NQW5 492 aa6.34□□□□□ -1.39
LINC00393-202ENST00000452852 MBNL3Q9NUK0 354 aaKnown RBP6.34□□□□□ -1.39
LINC00393-202ENST00000452852 ADAMTS6Q9UKP5 1117 aa6.34□□□□□ -1.39
LINC00393-202ENST00000452852 PRG4Q92954 1404 aaPredicted RBP6.33□□□□□ -1.4
LINC00393-202ENST00000452852 RGS13O14921 159 aa6.33□□□□□ -1.4
LINC00393-202ENST00000452852 RNASE1P07998 156 aaKnown RBP6.33□□□□□ -1.4
LINC00393-202ENST00000452852 RAG1P15918 1043 aa6.33□□□□□ -1.4
LINC00393-202ENST00000452852 ZP2Q05996 745 aa6.33□□□□□ -1.4
LINC00393-202ENST00000452852 THAP5Q7Z6K1 395 aa6.33□□□□□ -1.4
LINC00393-202ENST00000452852 PIWIL2Q8TC59 973 aaKnown RBP6.33□□□□□ -1.4
LINC00393-202ENST00000452852 RNF141Q8WVD5 230 aa6.33□□□□□ -1.4
LINC00393-202ENST00000452852 ATG4CQ96DT6 458 aa6.33□□□□□ -1.4
LINC00393-202ENST00000452852 KREMEN1Q96MU8 473 aa6.33□□□□□ -1.4
LINC00393-202ENST00000452852 ZSWIM5Q9P217 1185 aa6.33□□□□□ -1.4
LINC00393-202ENST00000452852 KIF27Q86VH2 1401 aa6.33□□□□□ -1.4
LINC00393-202ENST00000452852 WASH4PA8MWX3 477 aa6.32□□□□□ -1.4
LINC00393-202ENST00000452852 UBOX5O94941 541 aa6.32□□□□□ -1.4
LINC00393-202ENST00000452852 POLR2BP30876 1174 aaKnown RBP6.32□□□□□ -1.4
LINC00393-202ENST00000452852 FBLN7Q53RD9 439 aa6.32□□□□□ -1.4
LINC00393-202ENST00000452852 CDCP2Q5VXM1 449 aa6.32□□□□□ -1.4
LINC00393-202ENST00000452852 POU5F2Q8N7G0 328 aa6.32□□□□□ -1.4
LINC00393-202ENST00000452852 DTWD2Q8NBA8 298 aa6.32□□□□□ -1.4
LINC00393-202ENST00000452852 DUSP15Q9H1R2 295 aaPredicted RBP6.32□□□□□ -1.4
LINC00393-202ENST00000452852 PIF1Q9H611 641 aa6.32□□□□□ -1.4
LINC00393-202ENST00000452852 CNNM2Q9H8M5 875 aa6.32□□□□□ -1.4
LINC00393-202ENST00000452852 RC3H2Q9HBD1 1191 aaKnown RBP6.32□□□□□ -1.4
LINC00393-202ENST00000452852 KCNH3Q9ULD8 1083 aa6.32□□□□□ -1.4
LINC00393-202ENST00000452852 RBL2Q08999 1139 aa6.31□□□□□ -1.4
LINC00393-202ENST00000452852 PAK2Q13177 524 aa6.31□□□□□ -1.4
LINC00393-202ENST00000452852 LRRFIP1Q32MZ4 808 aaKnown RBP6.31□□□□□ -1.4
LINC00393-202ENST00000452852 SLC23A3Q6PIS1 610 aa6.31□□□□□ -1.4
LINC00393-202ENST00000452852 NLRC3Q7RTR2 1065 aa6.31□□□□□ -1.4
LINC00393-202ENST00000452852 VPS37DQ86XT2 251 aa6.31□□□□□ -1.4
LINC00393-202ENST00000452852 MCF2L2Q86YR7 1114 aa6.31□□□□□ -1.4
LINC00393-202ENST00000452852 TMEM40Q8WWA1 233 aa6.31□□□□□ -1.4
LINC00393-202ENST00000452852 VWCEQ96DN2 955 aa6.31□□□□□ -1.4
LINC00393-202ENST00000452852 CARS2Q9HA77 564 aaKnown RBP6.31□□□□□ -1.4
LINC00393-202ENST00000452852 LMCD1Q9NZU5 365 aa6.31□□□□□ -1.4
LINC00393-202ENST00000452852 MEIS3P2A8K0S8 358 aa6.3□□□□□ -1.4
LINC00393-202ENST00000452852 SRFP11831 508 aa6.3□□□□□ -1.4
LINC00393-202ENST00000452852 NME1P15531 152 aaKnown RBP6.3□□□□□ -1.4
LINC00393-202ENST00000452852 CHMP4BP1P59074 171 aa6.3□□□□□ -1.4
LINC00393-202ENST00000452852 KRTAP5-3Q6L8H2 238 aa6.3□□□□□ -1.4
LINC00393-202ENST00000452852 ZNF662Q6ZS27 426 aa6.3□□□□□ -1.4
LINC00393-202ENST00000452852 NOP9Q86U38 636 aaKnown RBP6.3□□□□□ -1.4
LINC00393-202ENST00000452852 LRRN4CLQ8ND94 238 aa6.3□□□□□ -1.4
LINC00393-202ENST00000452852 ARMC5Q96C12 935 aa6.3□□□□□ -1.4
LINC00393-202ENST00000452852 ASPNQ9BXN1 380 aa6.3□□□□□ -1.4
LINC00393-202ENST00000452852 ZSWIM4Q9H7M6 989 aa6.3□□□□□ -1.4
LINC00393-202ENST00000452852 ADCY10Q96PN6 1610 aa6.29□□□□□ -1.4
LINC00393-202ENST00000452852 ANKRD62A6NC57 917 aa6.29□□□□□ -1.4
LINC00393-202ENST00000452852 TSPOAP1O95153 1857 aa6.29□□□□□ -1.4
LINC00393-202ENST00000452852 TPP2P29144 1249 aaPredicted RBP6.29□□□□□ -1.4
LINC00393-202ENST00000452852 ASIC4Q96FT7 647 aa6.29□□□□□ -1.4
LINC00393-202ENST00000452852 FERD3LQ96RJ6 166 aa6.29□□□□□ -1.4
LINC00393-202ENST00000452852 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.29□□□□□ -1.4
LINC00393-202ENST00000452852 GPR62Q9BZJ7 368 aa6.29□□□□□ -1.4
LINC00393-202ENST00000452852 TRIT1Q9H3H1 467 aaKnown RBP6.29□□□□□ -1.4
LINC00393-202ENST00000452852 GINM1Q9NU53 330 aa6.29□□□□□ -1.4
LINC00393-202ENST00000452852 ZNRF3Q9ULT6 936 aa6.29□□□□□ -1.4
LINC00393-202ENST00000452852 PPT2Q9UMR5 302 aa6.29□□□□□ -1.4
LINC00393-202ENST00000452852 KIAA0586Q9BVV6 1533 aa6.29□□□□□ -1.4
LINC00393-202ENST00000452852 TLDC2A0PJX2 215 aa6.28□□□□□ -1.4
LINC00393-202ENST00000452852 STK10O94804 968 aaKnown RBP6.28□□□□□ -1.4
LINC00393-202ENST00000452852 ESR1P03372 595 aa6.28□□□□□ -1.4
LINC00393-202ENST00000452852 FGRP09769 529 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms