RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 BAG3O95817 575 aa16.85■□□□□ 0.29
SF1-211ENST00000448404 CALM1P0DP23 149 aa16.85■□□□□ 0.29
SF1-211ENST00000448404 CALM2P0DP24 149 aa16.85■□□□□ 0.29
SF1-211ENST00000448404 CALM3P0DP25 149 aa16.85■□□□□ 0.29
SF1-211ENST00000448404 ST5P78524 1137 aa16.85■□□□□ 0.29
SF1-211ENST00000448404 CERS5Q8N5B7 392 aa16.85■□□□□ 0.29
SF1-211ENST00000448404 BRMS1Q9HCU9 246 aa16.85■□□□□ 0.29
SF1-211ENST00000448404 A0A0U1RQJ8 604 aa16.85■□□□□ 0.29
SF1-211ENST00000448404 RAD21O60216 631 aa16.85■□□□□ 0.29
SF1-211ENST00000448404 RCAN1P53805 252 aa16.85■□□□□ 0.29
SF1-211ENST00000448404 RHBDL3P58872 404 aa16.85■□□□□ 0.29
SF1-211ENST00000448404 DMTNQ08495 405 aa16.85■□□□□ 0.29
SF1-211ENST00000448404 LRRC15Q8TF66 581 aa16.85■□□□□ 0.29
SF1-211ENST00000448404 ATRIPQ8WXE1 791 aa16.85■□□□□ 0.29
SF1-211ENST00000448404 NOL10Q9BSC4 688 aaKnown RBP16.85■□□□□ 0.29
SF1-211ENST00000448404 DDX4Q9NQI0 724 aaKnown RBP16.85■□□□□ 0.29
SF1-211ENST00000448404 CEP131Q9UPN4 1083 aa16.85■□□□□ 0.29
SF1-211ENST00000448404 KLRF2D3W0D1 207 aa16.84■□□□□ 0.29
SF1-211ENST00000448404 POLRMTO00411 1230 aaKnown RBP16.84■□□□□ 0.29
SF1-211ENST00000448404 SYT10Q6XYQ8 523 aa16.84■□□□□ 0.29
SF1-211ENST00000448404 BLIDQ8IZY5 108 aa16.84■□□□□ 0.29
SF1-211ENST00000448404 PPP1R13BQ96KQ4 1090 aa16.84■□□□□ 0.29
SF1-211ENST00000448404 USP17L5A8MUK1 530 aa16.84■□□□□ 0.29
SF1-211ENST00000448404 FANCGO15287 622 aa16.84■□□□□ 0.29
SF1-211ENST00000448404 ATP2C1P98194 919 aaPredicted RBP16.84■□□□□ 0.29
SF1-211ENST00000448404 ATP2B2Q01814 1243 aa16.84■□□□□ 0.29
SF1-211ENST00000448404 DHX8Q14562 1220 aaKnown RBP16.84■□□□□ 0.29
SF1-211ENST00000448404 CRY2Q49AN0 593 aa16.84■□□□□ 0.29
SF1-211ENST00000448404 GJA10Q969M2 543 aa16.84■□□□□ 0.29
SF1-211ENST00000448404 DESI2Q9BSY9 194 aa16.84■□□□□ 0.29
SF1-211ENST00000448404 COL24A1Q17RW2 1714 aa16.84■□□□□ 0.29
SF1-211ENST00000448404 TOP1P11387 765 aaKnown RBP16.83■□□□□ 0.29
SF1-211ENST00000448404 MTF1Q14872 753 aa16.83■□□□□ 0.29
SF1-211ENST00000448404 GDAQ9Y2T3 454 aa16.83■□□□□ 0.29
SF1-211ENST00000448404 SPDYE4A6NLX3 237 aa16.83■□□□□ 0.28
SF1-211ENST00000448404 CCT6AP40227 531 aaKnown RBP16.83■□□□□ 0.28
SF1-211ENST00000448404 TXNRD1Q16881 649 aa16.83■□□□□ 0.28
SF1-211ENST00000448404 NYAP1Q6ZVC0 841 aa16.83■□□□□ 0.28
SF1-211ENST00000448404 TMEM260Q9NX78 707 aa16.83■□□□□ 0.28
SF1-211ENST00000448404 CTNND2Q9UQB3 1225 aa16.83■□□□□ 0.28
SF1-211ENST00000448404 DAGLAQ9Y4D2 1042 aa16.83■□□□□ 0.28
SF1-211ENST00000448404 SBF2Q86WG5 1849 aa16.83■□□□□ 0.28
SF1-211ENST00000448404 TAF1LQ8IZX4 1826 aa16.83■□□□□ 0.28
SF1-211ENST00000448404 SLFN14P0C7P3 912 aa16.83■□□□□ 0.28
SF1-211ENST00000448404 VSTM4Q8IW00 320 aa16.83■□□□□ 0.28
SF1-211ENST00000448404 ZNF579Q8NAF0 562 aaKnown RBP16.83■□□□□ 0.28
SF1-211ENST00000448404 RASSF8Q8NHQ8 419 aa16.83■□□□□ 0.28
SF1-211ENST00000448404 RBM17Q96I25 401 aaKnown RBP16.83■□□□□ 0.28
SF1-211ENST00000448404 PIGSQ96S52 555 aa16.83■□□□□ 0.28
SF1-211ENST00000448404 ZNF215Q9UL58 517 aaPredicted RBP16.83■□□□□ 0.28
SF1-211ENST00000448404 PCDHA6Q9UN73 950 aa16.83■□□□□ 0.28
SF1-211ENST00000448404 PCDHA8Q9Y5H6 950 aa16.83■□□□□ 0.28
SF1-211ENST00000448404 KIAA1551Q9HCM1 1747 aa16.82■□□□□ 0.28
SF1-211ENST00000448404 KIF5BP33176 963 aa16.82■□□□□ 0.28
SF1-211ENST00000448404 ZFPM1Q8IX07 1006 aa16.82■□□□□ 0.28
SF1-211ENST00000448404 CCDC112Q8NEF3 446 aa16.82■□□□□ 0.28
SF1-211ENST00000448404 DBNDD1Q9H9R9 158 aa16.82■□□□□ 0.28
SF1-211ENST00000448404 TRPC5Q9UL62 973 aaPredicted RBP16.82■□□□□ 0.28
SF1-211ENST00000448404 NCBP1Q09161 790 aaKnown RBP16.82■□□□□ 0.28
SF1-211ENST00000448404 GRM4Q14833 912 aa16.82■□□□□ 0.28
SF1-211ENST00000448404 JAKMIP3Q5VZ66 844 aa16.82■□□□□ 0.28
SF1-211ENST00000448404 COA7Q96BR5 231 aa16.82■□□□□ 0.28
SF1-211ENST00000448404 GPCPD1Q9NPB8 672 aa16.82■□□□□ 0.28
SF1-211ENST00000448404 BIN2Q9UBW5 565 aaPredicted RBP16.82■□□□□ 0.28
SF1-211ENST00000448404 NHSQ6T4R5 1651 aa16.82■□□□□ 0.28
SF1-211ENST00000448404 PDS5AQ29RF7 1337 aaKnown RBP16.81■□□□□ 0.28
SF1-211ENST00000448404 SPATA31A6Q5VVP1 1343 aa16.81■□□□□ 0.28
SF1-211ENST00000448404 THSD7AQ9UPZ6 1657 aa16.81■□□□□ 0.28
SF1-211ENST00000448404 TRIM49BA6NDI0 452 aa16.81■□□□□ 0.28
SF1-211ENST00000448404 TCP10Q12799 353 aa16.81■□□□□ 0.28
SF1-211ENST00000448404 PPP2R5BQ15173 497 aa16.81■□□□□ 0.28
SF1-211ENST00000448404 LETM2Q2VYF4 491 aa16.81■□□□□ 0.28
SF1-211ENST00000448404 DGKHQ86XP1 1220 aa16.81■□□□□ 0.28
SF1-211ENST00000448404 SNED1Q8TER0 1413 aa16.81■□□□□ 0.28
SF1-211ENST00000448404 CCDC194A0A1B0GVG4 234 aa16.81■□□□□ 0.28
SF1-211ENST00000448404 STXBP3O00186 592 aa16.81■□□□□ 0.28
SF1-211ENST00000448404 AKR1B1P15121 316 aa16.81■□□□□ 0.28
SF1-211ENST00000448404 ZNF18P17022 549 aa16.81■□□□□ 0.28
SF1-211ENST00000448404 GSDMDP57764 484 aa16.81■□□□□ 0.28
SF1-211ENST00000448404 NFIAQ12857 509 aa16.81■□□□□ 0.28
SF1-211ENST00000448404 C4orf32Q8N8J7 132 aa16.81■□□□□ 0.28
SF1-211ENST00000448404 HPS3Q969F9 1004 aa16.81■□□□□ 0.28
SF1-211ENST00000448404 PCDHA4Q9UN74 947 aa16.81■□□□□ 0.28
SF1-211ENST00000448404 GPR75-ASB3A0A0A6YYF3 556 aa16.8■□□□□ 0.28
SF1-211ENST00000448404 PCP11498 1178 aaKnown RBP16.8■□□□□ 0.28
SF1-211ENST00000448404 TAL1P17542 331 aaPredicted RBP16.8■□□□□ 0.28
SF1-211ENST00000448404 GTF2F1P35269 517 aaKnown RBP eCLIP16.8■□□□□ 0.28
SF1-211ENST00000448404 SLC16A2P36021 539 aa16.8■□□□□ 0.28
SF1-211ENST00000448404 PPP4CP60510 307 aa16.8■□□□□ 0.28
SF1-211ENST00000448404 E2F4Q16254 413 aa16.8■□□□□ 0.28
SF1-211ENST00000448404 NT5DC1Q5TFE4 455 aa16.8■□□□□ 0.28
SF1-211ENST00000448404 KRT27Q7Z3Y8 459 aa16.8■□□□□ 0.28
SF1-211ENST00000448404 COL23A1Q86Y22 540 aaPredicted RBP16.8■□□□□ 0.28
SF1-211ENST00000448404 PPP1R3GB7ZBB8 358 aa16.8■□□□□ 0.28
SF1-211ENST00000448404 PPEF1O14829 653 aaPredicted RBP16.8■□□□□ 0.28
SF1-211ENST00000448404 NAPAP54920 295 aa16.8■□□□□ 0.28
SF1-211ENST00000448404 RRAGBQ5VZM2 374 aa16.8■□□□□ 0.28
SF1-211ENST00000448404 DPP8Q6V1X1 898 aaPredicted RBP16.8■□□□□ 0.28
SF1-211ENST00000448404 TOGARAM2Q6ZUX3 1019 aa16.8■□□□□ 0.28
SF1-211ENST00000448404 GPIHBP1Q8IV16 184 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms