RNA–Protein interactions for RNA: ENST00000435525.1

CTDSPL-204, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 371 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-204ENST00000435525 PARP1P09874 1014 aaKnown RBP19.31■□□□□ 0.68
CTDSPL-204ENST00000435525 ASPRV1Q53RT3 343 aa19.31■□□□□ 0.68
CTDSPL-204ENST00000435525 FAM160B2Q86V87 743 aa19.31■□□□□ 0.68
CTDSPL-204ENST00000435525 IFNL1Q8IU54 200 aa19.31■□□□□ 0.68
CTDSPL-204ENST00000435525 ZNF654Q8IZM8 581 aa19.31■□□□□ 0.68
CTDSPL-204ENST00000435525 GTF3C2Q8WUA4 911 aaPredicted RBP19.31■□□□□ 0.68
CTDSPL-204ENST00000435525 NUP133Q8WUM0 1156 aa19.31■□□□□ 0.68
CTDSPL-204ENST00000435525 PARK7Q99497 189 aaKnown RBP19.31■□□□□ 0.68
CTDSPL-204ENST00000435525 MAP3K14Q99558 947 aa19.31■□□□□ 0.68
CTDSPL-204ENST00000435525 RPAP3Q9H6T3 665 aaPredicted RBP19.31■□□□□ 0.68
CTDSPL-204ENST00000435525 FEM1BQ9UK73 627 aa19.31■□□□□ 0.68
CTDSPL-204ENST00000435525 CTDP1Q9Y5B0 961 aaPredicted RBP19.31■□□□□ 0.68
CTDSPL-204ENST00000435525 KLF18A0A0U1RQI7 1052 aa19.3■□□□□ 0.68
CTDSPL-204ENST00000435525 BTBD19C9JJ37 291 aa19.3■□□□□ 0.68
CTDSPL-204ENST00000435525 PDHXO00330 501 aa19.3■□□□□ 0.68
CTDSPL-204ENST00000435525 HOXA7P31268 230 aaPredicted RBP19.3■□□□□ 0.68
CTDSPL-204ENST00000435525 GNAQP50148 359 aa19.3■□□□□ 0.68
CTDSPL-204ENST00000435525 RCAN1P53805 252 aa19.3■□□□□ 0.68
CTDSPL-204ENST00000435525 PPP2R5BQ15173 497 aa19.3■□□□□ 0.68
CTDSPL-204ENST00000435525 FAM83BQ5T0W9 1011 aa19.3■□□□□ 0.68
CTDSPL-204ENST00000435525 CHMP4CQ96CF2 233 aa19.3■□□□□ 0.68
CTDSPL-204ENST00000435525 HOXC10Q9NYD6 342 aa19.3■□□□□ 0.68
CTDSPL-204ENST00000435525 CCDC196A0A1B0GTZ2 297 aa19.29■□□□□ 0.68
CTDSPL-204ENST00000435525 ZBTB43O43298 467 aa19.29■□□□□ 0.68
CTDSPL-204ENST00000435525 FLOT1O75955 427 aa19.29■□□□□ 0.68
CTDSPL-204ENST00000435525 PDHBP11177 359 aa19.29■□□□□ 0.68
CTDSPL-204ENST00000435525 SMCR8Q8TEV9 937 aaPredicted RBP19.29■□□□□ 0.68
CTDSPL-204ENST00000435525 AGXT2Q9BYV1 514 aa19.29■□□□□ 0.68
CTDSPL-204ENST00000435525 ZFYVE28Q9HCC9 887 aa19.29■□□□□ 0.68
CTDSPL-204ENST00000435525 ATAD5Q96QE3 1844 aa19.29■□□□□ 0.68
CTDSPL-204ENST00000435525 TMEM232C9JQI7 657 aa19.28■□□□□ 0.68
CTDSPL-204ENST00000435525 FDX1P10109 184 aa19.28■□□□□ 0.68
CTDSPL-204ENST00000435525 STAT2P52630 851 aa19.28■□□□□ 0.68
CTDSPL-204ENST00000435525 COG2Q14746 738 aa19.28■□□□□ 0.68
CTDSPL-204ENST00000435525 TAF1CQ15572 869 aaPredicted RBP19.28■□□□□ 0.68
CTDSPL-204ENST00000435525 TREML2Q5T2D2 321 aa19.28■□□□□ 0.68
CTDSPL-204ENST00000435525 GPAT2Q6NUI2 795 aa19.28■□□□□ 0.68
CTDSPL-204ENST00000435525 APOA5Q6Q788 366 aa19.28■□□□□ 0.68
CTDSPL-204ENST00000435525 CATSPERGQ6ZRH7 1159 aa19.28■□□□□ 0.68
CTDSPL-204ENST00000435525 LZTS2Q9BRK4 669 aa19.28■□□□□ 0.68
CTDSPL-204ENST00000435525 GPHNQ9NQX3 736 aaPredicted RBP19.28■□□□□ 0.68
CTDSPL-204ENST00000435525 RBM28Q9NW13 759 aaKnown RBP19.28■□□□□ 0.68
CTDSPL-204ENST00000435525 MYPNQ86TC9 1320 aa19.27■□□□□ 0.68
CTDSPL-204ENST00000435525 GREB1LQ9C091 1923 aaPredicted RBP19.27■□□□□ 0.68
CTDSPL-204ENST00000435525 GOLGA8BA8MQT2 603 aa19.27■□□□□ 0.68
CTDSPL-204ENST00000435525 CA12O43570 354 aa19.27■□□□□ 0.68
CTDSPL-204ENST00000435525 PLA2G6O60733 806 aa19.27■□□□□ 0.68
CTDSPL-204ENST00000435525 SNHG28P0DPA3 235 aa19.27■□□□□ 0.68
CTDSPL-204ENST00000435525 MCM2P49736 904 aa19.27■□□□□ 0.68
CTDSPL-204ENST00000435525 ZNF543Q08ER8 600 aa19.27■□□□□ 0.68
CTDSPL-204ENST00000435525 APOBRQ0VD83 1088 aa19.27■□□□□ 0.68
CTDSPL-204ENST00000435525 MOGSQ13724 837 aa19.27■□□□□ 0.68
CTDSPL-204ENST00000435525 MICU3Q86XE3 530 aa19.27■□□□□ 0.68
CTDSPL-204ENST00000435525 PRPF38AQ8NAV1 312 aaKnown RBP19.27■□□□□ 0.68
CTDSPL-204ENST00000435525 SLF1Q9BQI6 1058 aa19.27■□□□□ 0.68
CTDSPL-204ENST00000435525 ASCC2Q9H1I8 757 aaPredicted RBP19.27■□□□□ 0.68
CTDSPL-204ENST00000435525 GPCPD1Q9NPB8 672 aa19.27■□□□□ 0.68
CTDSPL-204ENST00000435525 GOLGA8AA7E2F4 631 aa19.26■□□□□ 0.67
CTDSPL-204ENST00000435525 IGF2BP3O00425 579 aaKnown RBP eCLIP19.26■□□□□ 0.67
CTDSPL-204ENST00000435525 DHX16O60231 1041 aaKnown RBP19.26■□□□□ 0.67
CTDSPL-204ENST00000435525 GCLCP48506 637 aaPredicted RBP19.26■□□□□ 0.67
CTDSPL-204ENST00000435525 METAP2P50579 478 aaKnown RBP eCLIP19.26■□□□□ 0.67
CTDSPL-204ENST00000435525 TROAPQ12815 778 aa19.26■□□□□ 0.67
CTDSPL-204ENST00000435525 DGKZQ13574 1117 aa19.26■□□□□ 0.67
CTDSPL-204ENST00000435525 GRM4Q14833 912 aa19.26■□□□□ 0.67
CTDSPL-204ENST00000435525 CPLX2Q6PUV4 134 aaKnown RBP19.26■□□□□ 0.67
CTDSPL-204ENST00000435525 SAMD1Q6SPF0 538 aaPredicted RBP19.26■□□□□ 0.67
CTDSPL-204ENST00000435525 KCTD1Q719H9 257 aa19.26■□□□□ 0.67
CTDSPL-204ENST00000435525 FAM43AQ8N2R8 423 aa19.26■□□□□ 0.67
CTDSPL-204ENST00000435525 MB21D1Q8N884 522 aa19.26■□□□□ 0.67
CTDSPL-204ENST00000435525 ZNF274Q96GC6 653 aaPredicted RBP19.26■□□□□ 0.67
CTDSPL-204ENST00000435525 ZIC5Q96T25 663 aa19.26■□□□□ 0.67
CTDSPL-204ENST00000435525 NUP88Q99567 741 aaPredicted RBP19.26■□□□□ 0.67
CTDSPL-204ENST00000435525 KIF2CQ99661 725 aa19.26■□□□□ 0.67
CTDSPL-204ENST00000435525 PTPN18Q99952 460 aa19.26■□□□□ 0.67
CTDSPL-204ENST00000435525 FRMPD2Q68DX3 1309 aaPredicted RBP19.25■□□□□ 0.67
CTDSPL-204ENST00000435525 ZBED4O75132 1171 aa19.25■□□□□ 0.67
CTDSPL-204ENST00000435525 AK2P54819 239 aa19.25■□□□□ 0.67
CTDSPL-204ENST00000435525 COL9A3Q14050 684 aaPredicted RBP19.25■□□□□ 0.67
CTDSPL-204ENST00000435525 TOB2Q14106 344 aaPredicted RBP19.25■□□□□ 0.67
CTDSPL-204ENST00000435525 RTN1Q16799 776 aa19.25■□□□□ 0.67
CTDSPL-204ENST00000435525 KIAA1755Q5JYT7 1200 aa19.25■□□□□ 0.67
CTDSPL-204ENST00000435525 FANCBQ8NB91 859 aa19.25■□□□□ 0.67
CTDSPL-204ENST00000435525 ZSCAN31Q96LW9 406 aaPredicted RBP19.25■□□□□ 0.67
CTDSPL-204ENST00000435525 SENP2Q9HC62 589 aa19.25■□□□□ 0.67
CTDSPL-204ENST00000435525 PNMA2Q9UL42 364 aa19.25■□□□□ 0.67
CTDSPL-204ENST00000435525 LIMCH1Q9UPQ0 1083 aa19.25■□□□□ 0.67
CTDSPL-204ENST00000435525 KLRF2D3W0D1 207 aa19.24■□□□□ 0.67
CTDSPL-204ENST00000435525 EVCP57679 992 aa19.24■□□□□ 0.67
CTDSPL-204ENST00000435525 SYDE2Q5VT97 1194 aa19.24■□□□□ 0.67
CTDSPL-204ENST00000435525 DNAJC5GQ8N7S2 189 aa19.24■□□□□ 0.67
CTDSPL-204ENST00000435525 KIFC2Q96AC6 838 aa19.24■□□□□ 0.67
CTDSPL-204ENST00000435525 MYL10Q9BUA6 226 aa19.24■□□□□ 0.67
CTDSPL-204ENST00000435525 SLKQ9H2G2 1235 aaPredicted RBP19.24■□□□□ 0.67
CTDSPL-204ENST00000435525 SAGE1Q9NXZ1 904 aa19.24■□□□□ 0.67
CTDSPL-204ENST00000435525 BRPF3Q9ULD4 1205 aa19.24■□□□□ 0.67
CTDSPL-204ENST00000435525 PPP1R9AQ9ULJ8 1098 aa19.24■□□□□ 0.67
CTDSPL-204ENST00000435525 CPLX1O14810 134 aa19.23■□□□□ 0.67
CTDSPL-204ENST00000435525 DSG3P32926 999 aa19.23■□□□□ 0.67
CTDSPL-204ENST00000435525 HERVK_113P62684 666 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms