RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 SKA2Q8WVK7 121 aaPredicted RBP12.58□□□□□ -0.4
SEC16A-206ENST00000431893 PICK1Q9NRD5 415 aa12.58□□□□□ -0.4
SEC16A-206ENST00000431893 DENND2AQ9ULE3 1009 aa12.58□□□□□ -0.4
SEC16A-206ENST00000431893 MAP3K5Q99683 1374 aa12.58□□□□□ -0.4
SEC16A-206ENST00000431893 KAT6BQ8WYB5 2073 aa12.58□□□□□ -0.4
SEC16A-206ENST00000431893 CSPG5O95196 566 aa12.58□□□□□ -0.4
SEC16A-206ENST00000431893 STMN1P16949 149 aa12.58□□□□□ -0.4
SEC16A-206ENST00000431893 ZKSCAN8Q15776 578 aaPredicted RBP12.58□□□□□ -0.4
SEC16A-206ENST00000431893 METTL13Q8N6R0 699 aa12.58□□□□□ -0.4
SEC16A-206ENST00000431893 ANKRD13CQ8N6S4 541 aa12.58□□□□□ -0.4
SEC16A-206ENST00000431893 SNX1Q13596 522 aa12.57□□□□□ -0.4
SEC16A-206ENST00000431893 CCDC93Q567U6 631 aa12.57□□□□□ -0.4
SEC16A-206ENST00000431893 ATL3Q6DD88 541 aa12.57□□□□□ -0.4
SEC16A-206ENST00000431893 RNF169Q8NCN4 708 aa12.57□□□□□ -0.4
SEC16A-206ENST00000431893 ATP2A3Q93084 1043 aa12.57□□□□□ -0.4
SEC16A-206ENST00000431893 NAP1L4Q99733 375 aaKnown RBP12.57□□□□□ -0.4
SEC16A-206ENST00000431893 CARD10Q9BWT7 1032 aa12.57□□□□□ -0.4
SEC16A-206ENST00000431893 ZNF215Q9UL58 517 aaPredicted RBP12.57□□□□□ -0.4
SEC16A-206ENST00000431893 RTCBQ9Y3I0 505 aaKnown RBP12.57□□□□□ -0.4
SEC16A-206ENST00000431893 KDRP35968 1356 aa12.57□□□□□ -0.4
SEC16A-206ENST00000431893 PPFIA4O75335 1185 aa12.57□□□□□ -0.4
SEC16A-206ENST00000431893 TRPA1O75762 1119 aa12.57□□□□□ -0.4
SEC16A-206ENST00000431893 STAM2O75886 525 aa12.57□□□□□ -0.4
SEC16A-206ENST00000431893 PFKFB1P16118 471 aa12.57□□□□□ -0.4
SEC16A-206ENST00000431893 POLR2FP61218 127 aaKnown RBP12.57□□□□□ -0.4
SEC16A-206ENST00000431893 NONOQ15233 471 aaKnown RBP eCLIP12.57□□□□□ -0.4
SEC16A-206ENST00000431893 RIOK1Q9BRS2 568 aaKnown RBP12.57□□□□□ -0.4
SEC16A-206ENST00000431893 TMOD4Q9NZQ9 345 aa12.57□□□□□ -0.4
SEC16A-206ENST00000431893 NCKAP5LQ9HCH0 1330 aa12.57□□□□□ -0.4
SEC16A-206ENST00000431893 A0A087WWV3 80 aa12.57□□□□□ -0.4
SEC16A-206ENST00000431893 ZBTB7BO15156 539 aaPredicted RBP12.57□□□□□ -0.4
SEC16A-206ENST00000431893 IFT88Q13099 833 aa12.57□□□□□ -0.4
SEC16A-206ENST00000431893 ME3Q16798 604 aa12.57□□□□□ -0.4
SEC16A-206ENST00000431893 TMTC4Q5T4D3 741 aa12.57□□□□□ -0.4
SEC16A-206ENST00000431893 MCUQ8NE86 351 aa12.57□□□□□ -0.4
SEC16A-206ENST00000431893 HVCN1Q96D96 273 aa12.57□□□□□ -0.4
SEC16A-206ENST00000431893 CHMP6Q96FZ7 201 aa12.57□□□□□ -0.4
SEC16A-206ENST00000431893 MAD1L1Q9Y6D9 718 aa12.57□□□□□ -0.4
SEC16A-206ENST00000431893 GNPATO15228 680 aa12.57□□□□□ -0.4
SEC16A-206ENST00000431893 SETSIPP0DME0 302 aa12.57□□□□□ -0.4
SEC16A-206ENST00000431893 C2orf54Q08AI8 447 aa12.57□□□□□ -0.4
SEC16A-206ENST00000431893 GPBP1Q86WP2 473 aa12.57□□□□□ -0.4
SEC16A-206ENST00000431893 TMEM87BQ96K49 555 aa12.57□□□□□ -0.4
SEC16A-206ENST00000431893 PPP1R9AQ9ULJ8 1098 aa12.57□□□□□ -0.4
SEC16A-206ENST00000431893 KDM2BQ8NHM5 1336 aa12.57□□□□□ -0.4
SEC16A-206ENST00000431893 ESYT2A0FGR8 921 aa12.57□□□□□ -0.4
SEC16A-206ENST00000431893 RBM17Q96I25 401 aaKnown RBP12.57□□□□□ -0.4
SEC16A-206ENST00000431893 SLC4A1P02730 911 aa12.56□□□□□ -0.4
SEC16A-206ENST00000431893 TMED1Q13445 227 aa12.56□□□□□ -0.4
SEC16A-206ENST00000431893 NSMFQ6X4W1 530 aa12.56□□□□□ -0.4
SEC16A-206ENST00000431893 HDAC11Q96DB2 347 aa12.56□□□□□ -0.4
SEC16A-206ENST00000431893 MMS19Q96T76 1030 aa12.56□□□□□ -0.4
SEC16A-206ENST00000431893 NRBP1Q9UHY1 535 aa12.56□□□□□ -0.4
SEC16A-206ENST00000431893 ZBBXA8MT70 800 aa12.56□□□□□ -0.4
SEC16A-206ENST00000431893 KRT3P12035 628 aa12.56□□□□□ -0.4
SEC16A-206ENST00000431893 HIBADHP31937 336 aaKnown RBP12.56□□□□□ -0.4
SEC16A-206ENST00000431893 YARSP54577 528 aaKnown RBP12.56□□□□□ -0.4
SEC16A-206ENST00000431893 ZNF445P59923 1031 aa12.56□□□□□ -0.4
SEC16A-206ENST00000431893 PHEXP78562 749 aa12.56□□□□□ -0.4
SEC16A-206ENST00000431893 GUCY2DQ02846 1103 aa12.56□□□□□ -0.4
SEC16A-206ENST00000431893 PKP1Q13835 747 aa12.56□□□□□ -0.4
SEC16A-206ENST00000431893 KMT5BQ4FZB7 885 aa12.56□□□□□ -0.4
SEC16A-206ENST00000431893 TTC6Q86TZ1 520 aa12.56□□□□□ -0.4
SEC16A-206ENST00000431893 ANKRD2Q9GZV1 360 aa12.56□□□□□ -0.4
SEC16A-206ENST00000431893 PYCARDQ9ULZ3 195 aa12.56□□□□□ -0.4
SEC16A-206ENST00000431893 ADGRL1O94910 1474 aa12.56□□□□□ -0.4
SEC16A-206ENST00000431893 PNMA6EA0A0J9YXQ4 647 aa12.56□□□□□ -0.4
SEC16A-206ENST00000431893 ZAP70P43403 619 aa12.56□□□□□ -0.4
SEC16A-206ENST00000431893 NME8Q8N427 588 aa12.56□□□□□ -0.4
SEC16A-206ENST00000431893 C14orf93Q9H972 538 aaKnown RBP12.56□□□□□ -0.4
SEC16A-206ENST00000431893 ARHGEF10LQ9HCE6 1279 aa12.56□□□□□ -0.4
SEC16A-206ENST00000431893 VCX3AQ9NNX9 186 aa12.56□□□□□ -0.4
SEC16A-206ENST00000431893 ZNF532Q9HCE3 1301 aa12.56□□□□□ -0.4
SEC16A-206ENST00000431893 PPP1R2P41236 205 aa12.56□□□□□ -0.4
SEC16A-206ENST00000431893 DDB1Q16531 1140 aa12.56□□□□□ -0.4
SEC16A-206ENST00000431893 JDP2Q8WYK2 163 aa12.56□□□□□ -0.4
SEC16A-206ENST00000431893 ABCF3Q9NUQ8 709 aa12.56□□□□□ -0.4
SEC16A-206ENST00000431893 PHLDB3Q6NSJ2 640 aa12.56□□□□□ -0.4
SEC16A-206ENST00000431893 TRIM56Q9BRZ2 755 aaKnown RBP12.56□□□□□ -0.4
SEC16A-206ENST00000431893 APOEP02649 317 aa12.56□□□□□ -0.4
SEC16A-206ENST00000431893 GDAP1Q8TB36 358 aa12.56□□□□□ -0.4
SEC16A-206ENST00000431893 LRGUKQ96M69 825 aa12.56□□□□□ -0.4
SEC16A-206ENST00000431893 TSKSQ9UJT2 592 aa12.56□□□□□ -0.4
SEC16A-206ENST00000431893 ATICP31939 592 aa12.55□□□□□ -0.4
SEC16A-206ENST00000431893 RASSF7Q02833 373 aa12.55□□□□□ -0.4
SEC16A-206ENST00000431893 PUM3Q15397 648 aaKnown RBP12.55□□□□□ -0.4
SEC16A-206ENST00000431893 TRIM50Q86XT4 487 aa12.55□□□□□ -0.4
SEC16A-206ENST00000431893 IFT122Q9HBG6 1241 aa12.55□□□□□ -0.4
SEC16A-206ENST00000431893 METTL14Q9HCE5 456 aaKnown RBP12.55□□□□□ -0.4
SEC16A-206ENST00000431893 SLC39A2Q9NP94 309 aa12.55□□□□□ -0.4
SEC16A-206ENST00000431893 GPHNQ9NQX3 736 aaPredicted RBP12.55□□□□□ -0.4
SEC16A-206ENST00000431893 PARP2Q9UGN5 583 aa12.55□□□□□ -0.4
SEC16A-206ENST00000431893 G3BP2Q9UN86 482 aaKnown RBP12.55□□□□□ -0.4
SEC16A-206ENST00000431893 RNMTO43148 476 aaKnown RBP12.55□□□□□ -0.4
SEC16A-206ENST00000431893 DLATP10515 647 aaKnown RBP12.55□□□□□ -0.4
SEC16A-206ENST00000431893 GPKOWQ92917 476 aaPredicted RBP eCLIP12.55□□□□□ -0.4
SEC16A-206ENST00000431893 SUCLG2Q96I99 432 aa12.55□□□□□ -0.4
SEC16A-206ENST00000431893 MAGI1Q96QZ7 1491 aaPredicted RBP12.55□□□□□ -0.4
SEC16A-206ENST00000431893 E7EWF7 191 aa12.55□□□□□ -0.4
SEC16A-206ENST00000431893 PHBP35232 272 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms