RNA–Protein interactions for RNA: ENST00000417946.5

CPS1-202, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-202ENST00000417946 FUT2Q10981 343 aa8.02□□□□□ -1.13
CPS1-202ENST00000417946 TROAPQ12815 778 aa8.02□□□□□ -1.13
CPS1-202ENST00000417946 STK3Q13188 491 aa8.02□□□□□ -1.13
CPS1-202ENST00000417946 PKP1Q13835 747 aa8.02□□□□□ -1.13
CPS1-202ENST00000417946 WTAPQ15007 396 aa8.02□□□□□ -1.13
CPS1-202ENST00000417946 NTRK3Q16288 839 aa8.02□□□□□ -1.13
CPS1-202ENST00000417946 TSR1Q2NL82 804 aaKnown RBP8.02□□□□□ -1.13
CPS1-202ENST00000417946 FOXP4Q8IVH2 680 aaPredicted RBP8.02□□□□□ -1.13
CPS1-202ENST00000417946 AMOTL1Q8IY63 956 aa8.02□□□□□ -1.13
CPS1-202ENST00000417946 ZNF654Q8IZM8 581 aa8.02□□□□□ -1.13
CPS1-202ENST00000417946 NSUN7Q8NE18 718 aaKnown RBP8.02□□□□□ -1.13
CPS1-202ENST00000417946 CEP95Q96GE4 821 aa8.02□□□□□ -1.13
CPS1-202ENST00000417946 DEFB129Q9H1M3 183 aa8.02□□□□□ -1.13
CPS1-202ENST00000417946 TAF1DQ9H5J8 278 aaPredicted RBP8.02□□□□□ -1.13
CPS1-202ENST00000417946 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.02□□□□□ -1.13
CPS1-202ENST00000417946 ZDHHC9Q9Y397 364 aa8.02□□□□□ -1.13
CPS1-202ENST00000417946 MYH15Q9Y2K3 1946 aa8.01□□□□□ -1.13
CPS1-202ENST00000417946 TSPY2A6NKD2 308 aa8.01□□□□□ -1.13
CPS1-202ENST00000417946 ADM5C9JUS6 153 aa8.01□□□□□ -1.13
CPS1-202ENST00000417946 UBE2Q2LH0YL09 131 aa8.01□□□□□ -1.13
CPS1-202ENST00000417946 MYO1BO43795 1136 aa8.01□□□□□ -1.13
CPS1-202ENST00000417946 GDF11O95390 407 aa8.01□□□□□ -1.13
CPS1-202ENST00000417946 FDPSP14324 419 aaKnown RBP8.01□□□□□ -1.13
CPS1-202ENST00000417946 EPHX2P34913 555 aa8.01□□□□□ -1.13
CPS1-202ENST00000417946 RCAN1P53805 252 aa8.01□□□□□ -1.13
CPS1-202ENST00000417946 CCT2P78371 535 aaKnown RBP8.01□□□□□ -1.13
CPS1-202ENST00000417946 NBPF12Q5TAG4 269 aaPredicted RBP8.01□□□□□ -1.13
CPS1-202ENST00000417946 PRAMEF18Q5VWM3 479 aa8.01□□□□□ -1.13
CPS1-202ENST00000417946 DGKHQ86XP1 1220 aa8.01□□□□□ -1.13
CPS1-202ENST00000417946 APOBEC3FQ8IUX4 373 aaKnown RBP8.01□□□□□ -1.13
CPS1-202ENST00000417946 ZSCAN29Q8IWY8 852 aaPredicted RBP8.01□□□□□ -1.13
CPS1-202ENST00000417946 SHISA4Q96DD7 197 aa8.01□□□□□ -1.13
CPS1-202ENST00000417946 TMEM47Q9BQJ4 181 aa8.01□□□□□ -1.13
CPS1-202ENST00000417946 UBAC1Q9BSL1 405 aa8.01□□□□□ -1.13
CPS1-202ENST00000417946 SLKQ9H2G2 1235 aaPredicted RBP8.01□□□□□ -1.13
CPS1-202ENST00000417946 MKNK2Q9HBH9 465 aa8.01□□□□□ -1.13
CPS1-202ENST00000417946 MTMR4Q9NYA4 1195 aa8.01□□□□□ -1.13
CPS1-202ENST00000417946 HERC5Q9UII4 1024 aaKnown RBP8.01□□□□□ -1.13
CPS1-202ENST00000417946 TSKSQ9UJT2 592 aa8.01□□□□□ -1.13
CPS1-202ENST00000417946 RLFQ13129 1914 aa8□□□□□ -1.13
CPS1-202ENST00000417946 A0A1W2PRG0 241 aa8□□□□□ -1.13
CPS1-202ENST00000417946 PTPDC1A2A3K4 754 aa8□□□□□ -1.13
CPS1-202ENST00000417946 ZBTB43O43298 467 aa8□□□□□ -1.13
CPS1-202ENST00000417946 DDAH1O94760 285 aa8□□□□□ -1.13
CPS1-202ENST00000417946 TSPY3P0CV98 308 aa8□□□□□ -1.13
CPS1-202ENST00000417946 TSPY8P0CW00 308 aa8□□□□□ -1.13
CPS1-202ENST00000417946 LMOD1P29536 600 aaPredicted RBP8□□□□□ -1.13
CPS1-202ENST00000417946 TNFAIP1Q13829 316 aa8□□□□□ -1.13
CPS1-202ENST00000417946 GRM4Q14833 912 aa8□□□□□ -1.13
CPS1-202ENST00000417946 SEPT2Q15019 361 aa8□□□□□ -1.13
CPS1-202ENST00000417946 MIGA2Q7L4E1 593 aa8□□□□□ -1.13
CPS1-202ENST00000417946 NBPF11Q86T75 865 aa8□□□□□ -1.13
CPS1-202ENST00000417946 MICU3Q86XE3 530 aa8□□□□□ -1.13
CPS1-202ENST00000417946 IQCA1Q86XH1 822 aa8□□□□□ -1.13
CPS1-202ENST00000417946 ZNF112Q9UJU3 913 aa8□□□□□ -1.13
CPS1-202ENST00000417946 ZBTB21Q9ULJ3 1066 aa8□□□□□ -1.13
CPS1-202ENST00000417946 FZD1Q9UP38 647 aa8□□□□□ -1.13
CPS1-202ENST00000417946 IQCA1LA6NCM1 817 aa7.99□□□□□ -1.13
CPS1-202ENST00000417946 GOLGA8AA7E2F4 631 aa7.99□□□□□ -1.13
CPS1-202ENST00000417946 PPFIA3O75145 1194 aa7.99□□□□□ -1.13
CPS1-202ENST00000417946 PLEKHA8P1O95397 391 aa7.99□□□□□ -1.13
CPS1-202ENST00000417946 GH2P01242 217 aa7.99□□□□□ -1.13
CPS1-202ENST00000417946 SNHG28P0DPA3 235 aa7.99□□□□□ -1.13
CPS1-202ENST00000417946 ADD1P35611 737 aaKnown RBP7.99□□□□□ -1.13
CPS1-202ENST00000417946 TNNI2P48788 182 aa7.99□□□□□ -1.13
CPS1-202ENST00000417946 METAP2P50579 478 aaKnown RBP eCLIP7.99□□□□□ -1.13
CPS1-202ENST00000417946 FGD1P98174 961 aa7.99□□□□□ -1.13
CPS1-202ENST00000417946 SART3Q15020 963 aaKnown RBP7.99□□□□□ -1.13
CPS1-202ENST00000417946 CERKLQ49MI3 558 aaPredicted RBP7.99□□□□□ -1.13
CPS1-202ENST00000417946 KIAA1755Q5JYT7 1200 aa7.99□□□□□ -1.13
CPS1-202ENST00000417946 IFIT1BQ5T764 474 aaKnown RBP7.99□□□□□ -1.13
CPS1-202ENST00000417946 TMEM179Q6ZVK1 233 aa7.99□□□□□ -1.13
CPS1-202ENST00000417946 TMTC3Q6ZXV5 915 aa7.99□□□□□ -1.13
CPS1-202ENST00000417946 USP50Q70EL3 339 aaPredicted RBP7.99□□□□□ -1.13
CPS1-202ENST00000417946 CCDC84Q86UT8 332 aaPredicted RBP7.99□□□□□ -1.13
CPS1-202ENST00000417946 CCDC144CPQ8IYA2 1237 aa7.99□□□□□ -1.13
CPS1-202ENST00000417946 ZNF444Q8N0Y2 327 aaPredicted RBP7.99□□□□□ -1.13
CPS1-202ENST00000417946 LRRC47Q8N1G4 583 aaKnown RBP7.99□□□□□ -1.13
CPS1-202ENST00000417946 CRACR2BQ8N4Y2 399 aaPredicted RBP7.99□□□□□ -1.13
CPS1-202ENST00000417946 FANCBQ8NB91 859 aa7.99□□□□□ -1.13
CPS1-202ENST00000417946 PNMA1Q8ND90 353 aa7.99□□□□□ -1.13
CPS1-202ENST00000417946 CCDC17Q96LX7 622 aa7.99□□□□□ -1.13
CPS1-202ENST00000417946 LLPHQ9BRT6 129 aaKnown RBP7.99□□□□□ -1.13
CPS1-202ENST00000417946 GLIS2Q9BZE0 524 aaPredicted RBP7.99□□□□□ -1.13
CPS1-202ENST00000417946 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.99□□□□□ -1.133e-6■■■■■ 29.3
CPS1-202ENST00000417946 ZNF287Q9HBT7 754 aa7.99□□□□□ -1.13
CPS1-202ENST00000417946 RBM27Q9P2N5 1060 aaKnown RBP7.99□□□□□ -1.13
CPS1-202ENST00000417946 PNMA3Q9UL41 463 aa7.99□□□□□ -1.13
CPS1-202ENST00000417946 PPP2R3BQ9Y5P8 575 aa7.99□□□□□ -1.13
CPS1-202ENST00000417946 SLC12A7Q9Y666 1083 aa7.99□□□□□ -1.13
CPS1-202ENST00000417946 CNTNAP5Q8WYK1 1306 aa7.99□□□□□ -1.13
CPS1-202ENST00000417946 TCHHQ07283 1943 aa7.98□□□□□ -1.13
CPS1-202ENST00000417946 LOC285556D6RIA3 1793 aa7.98□□□□□ -1.13
CPS1-202ENST00000417946 PALM3A6NDB9 673 aaPredicted RBP7.98□□□□□ -1.13
CPS1-202ENST00000417946 CCDC69A6NI79 296 aa7.98□□□□□ -1.13
CPS1-202ENST00000417946 TOP1P11387 765 aaKnown RBP7.98□□□□□ -1.13
CPS1-202ENST00000417946 EEF2P13639 858 aaKnown RBP7.98□□□□□ -1.13
CPS1-202ENST00000417946 IFNAR1P17181 557 aa7.98□□□□□ -1.13
CPS1-202ENST00000417946 GJB2P29033 226 aa7.98□□□□□ -1.13
CPS1-202ENST00000417946 INPP5BP32019 993 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms