RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 MKL1Q969V6 931 aa18.18■□□□□ 0.5
NUP50-204ENST00000417702 SHISA4Q96DD7 197 aa18.18■□□□□ 0.5
NUP50-204ENST00000417702 DEFB118Q96PH6 123 aa18.18■□□□□ 0.5
NUP50-204ENST00000417702 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.18■□□□□ 0.51e-8■■■■■ 27
NUP50-204ENST00000417702 HMX1Q9NP08 348 aaPredicted RBP18.18■□□□□ 0.5
NUP50-204ENST00000417702 PAK6Q9NQU5 681 aaPredicted RBP18.18■□□□□ 0.5
NUP50-204ENST00000417702 ANAPC4Q9UJX5 808 aa18.18■□□□□ 0.5
NUP50-204ENST00000417702 SYNPO2Q9UMS6 1093 aa18.18■□□□□ 0.5
NUP50-204ENST00000417702 RPTORQ8N122 1335 aa18.18■□□□□ 0.5
NUP50-204ENST00000417702 PLIN4Q96Q06 1357 aa18.17■□□□□ 0.5
NUP50-204ENST00000417702 TSPY2A6NKD2 308 aa18.17■□□□□ 0.5
NUP50-204ENST00000417702 STRNO43815 780 aa18.17■□□□□ 0.5
NUP50-204ENST00000417702 NDUFB10O96000 172 aa18.17■□□□□ 0.5
NUP50-204ENST00000417702 FGAP02671 866 aa18.17■□□□□ 0.5
NUP50-204ENST00000417702 TFRCP02786 760 aaKnown RBP18.17■□□□□ 0.5
NUP50-204ENST00000417702 PRPF38BQ5VTL8 546 aaKnown RBP18.17■□□□□ 0.5
NUP50-204ENST00000417702 ZNF589Q86UQ0 364 aaPredicted RBP18.17■□□□□ 0.5
NUP50-204ENST00000417702 MROH8Q9H579 483 aa18.17■□□□□ 0.5
NUP50-204ENST00000417702 FBXO28Q9NVF7 368 aa18.17■□□□□ 0.5
NUP50-204ENST00000417702 PPP1R9AQ9ULJ8 1098 aa18.17■□□□□ 0.5
NUP50-204ENST00000417702 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.17■□□□□ 0.5
NUP50-204ENST00000417702 GREB1LQ9C091 1923 aaPredicted RBP18.17■□□□□ 0.5
NUP50-204ENST00000417702 RANBP6O60518 1105 aaKnown RBP18.16■□□□□ 0.5
NUP50-204ENST00000417702 PRKAR2AP13861 404 aaKnown RBP18.16■□□□□ 0.5
NUP50-204ENST00000417702 ERCC3P19447 782 aa18.16■□□□□ 0.5
NUP50-204ENST00000417702 TRIM32Q13049 653 aa18.16■□□□□ 0.5
NUP50-204ENST00000417702 GRB14Q14449 540 aa18.16■□□□□ 0.5
NUP50-204ENST00000417702 NCAPG2Q86XI2 1143 aa18.16■□□□□ 0.5
NUP50-204ENST00000417702 NUP88Q99567 741 aaPredicted RBP18.16■□□□□ 0.5
NUP50-204ENST00000417702 SLF1Q9BQI6 1058 aa18.16■□□□□ 0.5
NUP50-204ENST00000417702 TOMM22Q9NS69 142 aa18.16■□□□□ 0.5
NUP50-204ENST00000417702 ADAMTS5Q9UNA0 930 aa18.16■□□□□ 0.5
NUP50-204ENST00000417702 PLXNB2O15031 1838 aa18.16■□□□□ 0.5
NUP50-204ENST00000417702 VWA5AO00534 786 aa18.15■□□□□ 0.5
NUP50-204ENST00000417702 ORC4O43929 436 aa18.15■□□□□ 0.5
NUP50-204ENST00000417702 SLC25A27O95847 323 aa18.15■□□□□ 0.5
NUP50-204ENST00000417702 TMEM132BQ14DG7 1078 aa18.15■□□□□ 0.5
NUP50-204ENST00000417702 MFSD14CQ5VZR4 134 aa18.15■□□□□ 0.5
NUP50-204ENST00000417702 CWC27Q6UX04 472 aaKnown RBP18.15■□□□□ 0.5
NUP50-204ENST00000417702 DPP9Q86TI2 863 aa18.15■□□□□ 0.5
NUP50-204ENST00000417702 LRRC47Q8N1G4 583 aaKnown RBP18.15■□□□□ 0.5
NUP50-204ENST00000417702 GMCL1P1Q8NEA9 526 aa18.15■□□□□ 0.5
NUP50-204ENST00000417702 INCENPQ9NQS7 918 aa18.15■□□□□ 0.5
NUP50-204ENST00000417702 ZMYM6O95789 1325 aa18.15■□□□□ 0.5
NUP50-204ENST00000417702 RLFQ13129 1914 aa18.15■□□□□ 0.5
NUP50-204ENST00000417702 FARP2O94887 1054 aaPredicted RBP18.14■□□□□ 0.49
NUP50-204ENST00000417702 HOXC6P09630 235 aa18.14■□□□□ 0.49
NUP50-204ENST00000417702 CCL14Q16627 93 aa18.14■□□□□ 0.49
NUP50-204ENST00000417702 MAP3K21Q5TCX8 1036 aa18.14■□□□□ 0.49
NUP50-204ENST00000417702 SLFN13Q68D06 897 aa18.14■□□□□ 0.49
NUP50-204ENST00000417702 SLC5A4Q9NY91 659 aa18.14■□□□□ 0.49
NUP50-204ENST00000417702 CTDP1Q9Y5B0 961 aaPredicted RBP18.14■□□□□ 0.49
NUP50-204ENST00000417702 PDE4AP27815 886 aa18.13■□□□□ 0.49
NUP50-204ENST00000417702 ADORA2AP29274 412 aa18.13■□□□□ 0.49
NUP50-204ENST00000417702 COPB2P35606 906 aa18.13■□□□□ 0.49
NUP50-204ENST00000417702 STAT3P40763 770 aa18.13■□□□□ 0.49
NUP50-204ENST00000417702 CACNB2Q08289 660 aaPredicted RBP18.13■□□□□ 0.49
NUP50-204ENST00000417702 RRP12Q5JTH9 1297 aaKnown RBP18.13■□□□□ 0.49
NUP50-204ENST00000417702 RIOX2Q8IUF8 465 aa18.13■□□□□ 0.49
NUP50-204ENST00000417702 ABRAQ8N0Z2 381 aa18.13■□□□□ 0.49
NUP50-204ENST00000417702 PRPF38AQ8NAV1 312 aaKnown RBP18.13■□□□□ 0.49
NUP50-204ENST00000417702 CRISPLD2Q9H0B8 497 aa18.13■□□□□ 0.49
NUP50-204ENST00000417702 FEM1BQ9UK73 627 aa18.13■□□□□ 0.49
NUP50-204ENST00000417702 ISY1Q9ULR0 285 aaKnown RBP18.13■□□□□ 0.49
NUP50-204ENST00000417702 STX8Q9UNK0 236 aa18.13■□□□□ 0.49
NUP50-204ENST00000417702 BRCA2P51587 3418 aa18.12■□□□□ 0.49
NUP50-204ENST00000417702 ZBED4O75132 1171 aa18.12■□□□□ 0.49
NUP50-204ENST00000417702 FGRP09769 529 aa18.12■□□□□ 0.49
NUP50-204ENST00000417702 PCP11498 1178 aaKnown RBP18.12■□□□□ 0.49
NUP50-204ENST00000417702 FCER1AP12319 257 aa18.12■□□□□ 0.49
NUP50-204ENST00000417702 BMP3P12645 472 aa18.12■□□□□ 0.49
NUP50-204ENST00000417702 HAND2P61296 217 aa18.12■□□□□ 0.49
NUP50-204ENST00000417702 TTC22Q5TAA0 569 aa18.12■□□□□ 0.49
NUP50-204ENST00000417702 NPLOC4Q8TAT6 608 aa18.12■□□□□ 0.49
NUP50-204ENST00000417702 HTATIP2Q9BUP3 242 aa18.12■□□□□ 0.49
NUP50-204ENST00000417702 A0A0G2JMZ2 1700 aa18.12■□□□□ 0.49
NUP50-204ENST00000417702 TNRC18O15417 2968 aaPredicted RBP18.12■□□□□ 0.49
NUP50-204ENST00000417702 MYH4Q9Y623 1939 aa18.11■□□□□ 0.49
NUP50-204ENST00000417702 MFSD6Q6ZSS7 791 aa18.11■□□□□ 0.49
NUP50-204ENST00000417702 UBE2Q1Q7Z7E8 422 aa18.11■□□□□ 0.49
NUP50-204ENST00000417702 KIFC2Q96AC6 838 aa18.11■□□□□ 0.49
NUP50-204ENST00000417702 TEX13BQ9BXU2 312 aa18.11■□□□□ 0.49
NUP50-204ENST00000417702 RNF41Q9H4P4 317 aaPredicted RBP18.11■□□□□ 0.49
NUP50-204ENST00000417702 IL17RBQ9NRM6 502 aa18.11■□□□□ 0.49
NUP50-204ENST00000417702 FLRT1Q9NZU1 646 aa18.11■□□□□ 0.49
NUP50-204ENST00000417702 ZNF214Q9UL59 606 aaPredicted RBP18.11■□□□□ 0.49
NUP50-204ENST00000417702 TACC3Q9Y6A5 838 aa18.11■□□□□ 0.49
NUP50-204ENST00000417702 NMT2O60551 498 aa18.1■□□□□ 0.49
NUP50-204ENST00000417702 CENPBP07199 599 aaPredicted RBP18.1■□□□□ 0.49
NUP50-204ENST00000417702 SLC1A4P43007 532 aa18.1■□□□□ 0.49
NUP50-204ENST00000417702 KCTD2Q14681 263 aa18.1■□□□□ 0.49
NUP50-204ENST00000417702 AKNAD1Q5T1N1 836 aa18.1■□□□□ 0.49
NUP50-204ENST00000417702 ANKLE1Q8NAG6 615 aa18.1■□□□□ 0.49
NUP50-204ENST00000417702 REPS2Q8NFH8 660 aa18.1■□□□□ 0.49
NUP50-204ENST00000417702 DPF3Q92784 378 aa18.1■□□□□ 0.49
NUP50-204ENST00000417702 GMCL1Q96IK5 515 aa18.1■□□□□ 0.49
NUP50-204ENST00000417702 MMP19Q99542 508 aa18.1■□□□□ 0.49
NUP50-204ENST00000417702 MKI67P46013 3256 aaKnown RBP18.1■□□□□ 0.49
NUP50-204ENST00000417702 ZNF213O14771 459 aa18.09■□□□□ 0.49
NUP50-204ENST00000417702 COBLO75128 1261 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms