RNA–Protein interactions for RNA: ENST00000417292.5

SSB-204, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-204ENST00000417292 PRDM12Q9H4Q4 367 aa16.73■□□□□ 0.27
SSB-204ENST00000417292 ANTXR1Q9H6X2 564 aa16.73■□□□□ 0.27
SSB-204ENST00000417292 ROBO3Q96MS0 1386 aa16.73■□□□□ 0.27
SSB-204ENST00000417292 FLOT1O75955 427 aa16.72■□□□□ 0.27
SSB-204ENST00000417292 TIMP1P01033 207 aa16.72■□□□□ 0.27
SSB-204ENST00000417292 ZNF865P0CJ78 1059 aaPredicted RBP16.72■□□□□ 0.27
SSB-204ENST00000417292 ADGRE1Q14246 886 aa16.72■□□□□ 0.27
SSB-204ENST00000417292 TMEM132BQ14DG7 1078 aa16.72■□□□□ 0.27
SSB-204ENST00000417292 CLEC10AQ8IUN9 316 aa16.72■□□□□ 0.27
SSB-204ENST00000417292 SIAH1Q8IUQ4 282 aa16.72■□□□□ 0.27
SSB-204ENST00000417292 SPICE1Q8N0Z3 855 aa16.72■□□□□ 0.27
SSB-204ENST00000417292 GAS2L1Q99501 681 aaPredicted RBP16.72■□□□□ 0.27
SSB-204ENST00000417292 TINF2Q9BSI4 451 aa16.72■□□□□ 0.27
SSB-204ENST00000417292 CCDC8Q9H0W5 538 aaPredicted RBP16.72■□□□□ 0.27
SSB-204ENST00000417292 THEGQ9P2T0 379 aa16.72■□□□□ 0.27
SSB-204ENST00000417292 TBX21Q9UL17 535 aa16.72■□□□□ 0.27
SSB-204ENST00000417292 PARP14Q460N5 1801 aa16.71■□□□□ 0.27
SSB-204ENST00000417292 POLR3DP05423 398 aaPredicted RBP16.71■□□□□ 0.27
SSB-204ENST00000417292 TRIM27P14373 513 aa16.71■□□□□ 0.27
SSB-204ENST00000417292 ACLYP53396 1101 aa16.71■□□□□ 0.27
SSB-204ENST00000417292 OS9Q13438 667 aaPredicted RBP16.71■□□□□ 0.27
SSB-204ENST00000417292 ZNF792Q3KQV3 632 aa16.71■□□□□ 0.27
SSB-204ENST00000417292 AKNAD1Q5T1N1 836 aa16.71■□□□□ 0.27
SSB-204ENST00000417292 RASIP1Q5U651 963 aa16.71■□□□□ 0.27
SSB-204ENST00000417292 PLXNA1Q9UIW2 1896 aa16.71■□□□□ 0.27
SSB-204ENST00000417292 DCDC2CA8MYV0 355 aa16.7■□□□□ 0.26
SSB-204ENST00000417292 SURF6O75683 361 aaKnown RBP16.7■□□□□ 0.26
SSB-204ENST00000417292 TMEM240Q5SV17 173 aa16.7■□□□□ 0.26
SSB-204ENST00000417292 MFSD5Q6N075 450 aa16.7■□□□□ 0.26
SSB-204ENST00000417292 SAMD1Q6SPF0 538 aaPredicted RBP16.7■□□□□ 0.26
SSB-204ENST00000417292 SSH3Q8TE77 659 aa16.7■□□□□ 0.26
SSB-204ENST00000417292 EAF2Q96CJ1 260 aaPredicted RBP16.7■□□□□ 0.26
SSB-204ENST00000417292 UHRF1Q96T88 793 aaPredicted RBP16.7■□□□□ 0.26
SSB-204ENST00000417292 MMP19Q99542 508 aa16.7■□□□□ 0.26
SSB-204ENST00000417292 TSEN34Q9BSV6 310 aaKnown RBP16.7■□□□□ 0.26
SSB-204ENST00000417292 STARD7Q9NQZ5 370 aa16.7■□□□□ 0.26
SSB-204ENST00000417292 MYO9BQ13459 2157 aa16.7■□□□□ 0.26
SSB-204ENST00000417292 TRANK1O15050 2925 aa16.69■□□□□ 0.26
SSB-204ENST00000417292 NAV1Q8NEY1 1877 aa16.69■□□□□ 0.26
SSB-204ENST00000417292 COL11A1P12107 1806 aaPredicted RBP16.69■□□□□ 0.26
SSB-204ENST00000417292 SLC25A27O95847 323 aa16.69■□□□□ 0.26
SSB-204ENST00000417292 AKR1A1P14550 325 aa16.69■□□□□ 0.26
SSB-204ENST00000417292 MRPS5P82675 430 aaKnown RBP16.69■□□□□ 0.26
SSB-204ENST00000417292 MAP3K12Q12852 859 aa16.69■□□□□ 0.26
SSB-204ENST00000417292 CCDC85BQ15834 202 aaPredicted RBP16.69■□□□□ 0.26
SSB-204ENST00000417292 CCSAPQ6IQ19 270 aaPredicted RBP16.69■□□□□ 0.26
SSB-204ENST00000417292 CCDC129Q6ZRS4 1044 aa16.69■□□□□ 0.26
SSB-204ENST00000417292 TMEM179Q6ZVK1 233 aa16.69■□□□□ 0.26
SSB-204ENST00000417292 KLHDC9Q8NEP7 349 aa16.69■□□□□ 0.26
SSB-204ENST00000417292 MCM9Q9NXL9 1143 aa16.69■□□□□ 0.26
SSB-204ENST00000417292 ADAMTS5Q9UNA0 930 aa16.69■□□□□ 0.26
SSB-204ENST00000417292 DIS3Q9Y2L1 958 aaKnown RBP16.69■□□□□ 0.26
SSB-204ENST00000417292 TMX2Q9Y320 296 aa16.69■□□□□ 0.26
SSB-204ENST00000417292 SYNRGQ9UMZ2 1314 aa16.69■□□□□ 0.26
SSB-204ENST00000417292 BCAR3O75815 825 aa16.68■□□□□ 0.26
SSB-204ENST00000417292 CYP2D6P10635 497 aa16.68■□□□□ 0.26
SSB-204ENST00000417292 CSF2RAP15509 400 aa16.68■□□□□ 0.26
SSB-204ENST00000417292 IRX5P78411 483 aaPredicted RBP16.68■□□□□ 0.26
SSB-204ENST00000417292 KCNA10Q16322 511 aa16.68■□□□□ 0.26
SSB-204ENST00000417292 RIOX2Q8IUF8 465 aa16.68■□□□□ 0.26
SSB-204ENST00000417292 NUP133Q8WUM0 1156 aa16.68■□□□□ 0.26
SSB-204ENST00000417292 CLUAP1Q96AJ1 413 aa16.68■□□□□ 0.26
SSB-204ENST00000417292 FAM122AQ96E09 287 aa16.68■□□□□ 0.26
SSB-204ENST00000417292 VCPKMTQ9H867 229 aa16.68■□□□□ 0.26
SSB-204ENST00000417292 FBXO28Q9NVF7 368 aa16.68■□□□□ 0.26
SSB-204ENST00000417292 MAGEB6P1A0A0J9YX57 407 aa16.67■□□□□ 0.26
SSB-204ENST00000417292 MYADML2A6NDP7 307 aa16.67■□□□□ 0.26
SSB-204ENST00000417292 ACRP10323 421 aa16.67■□□□□ 0.26
SSB-204ENST00000417292 CDK7P50613 346 aa16.67■□□□□ 0.26
SSB-204ENST00000417292 ATP8B2P98198 1209 aa16.67■□□□□ 0.26
SSB-204ENST00000417292 PPIGQ13427 754 aaKnown RBP eCLIP16.67■□□□□ 0.262e-8■□□□□ 9.4
SSB-204ENST00000417292 KCTD2Q14681 263 aa16.67■□□□□ 0.26
SSB-204ENST00000417292 DYNLL2Q96FJ2 89 aa16.67■□□□□ 0.26
SSB-204ENST00000417292 MOXD2PA6NHM9 499 aa16.66■□□□□ 0.26
SSB-204ENST00000417292 WDR46O15213 610 aaKnown RBP16.66■□□□□ 0.26
SSB-204ENST00000417292 AKR1B1P15121 316 aa16.66■□□□□ 0.26
SSB-204ENST00000417292 IGFBP4P22692 258 aa16.66■□□□□ 0.26
SSB-204ENST00000417292 ICA1Q05084 483 aa16.66■□□□□ 0.26
SSB-204ENST00000417292 TMED8Q6PL24 325 aaPredicted RBP16.66■□□□□ 0.26
SSB-204ENST00000417292 ZNF365Q70YC5 407 aa16.66■□□□□ 0.26
SSB-204ENST00000417292 SDR42E1Q8WUS8 393 aa16.66■□□□□ 0.26
SSB-204ENST00000417292 NECAB3Q96P71 396 aaPredicted RBP16.66■□□□□ 0.26
SSB-204ENST00000417292 ARHGEF10LQ9HCE6 1279 aa16.66■□□□□ 0.26
SSB-204ENST00000417292 DCP1AQ9NPI6 582 aaPredicted RBP16.66■□□□□ 0.26
SSB-204ENST00000417292 ZNF214Q9UL59 606 aaPredicted RBP16.66■□□□□ 0.26
SSB-204ENST00000417292 CNPY2Q9Y2B0 182 aa16.66■□□□□ 0.26
SSB-204ENST00000417292 NOP58Q9Y2X3 529 aaKnown RBP16.66■□□□□ 0.26
SSB-204ENST00000417292 SMIM22K7EJ46 135 aa16.65■□□□□ 0.26
SSB-204ENST00000417292 SNAI1O95863 264 aaPredicted RBP16.65■□□□□ 0.26
SSB-204ENST00000417292 STAT3P40763 770 aa16.65■□□□□ 0.26
SSB-204ENST00000417292 REPS2Q8NFH8 660 aa16.65■□□□□ 0.26
SSB-204ENST00000417292 FRAT1Q92837 279 aaPredicted RBP16.65■□□□□ 0.26
SSB-204ENST00000417292 CRNKL1Q9BZJ0 848 aaKnown RBP16.65■□□□□ 0.26
SSB-204ENST00000417292 C1orf115Q9H7X2 142 aa16.65■□□□□ 0.26
SSB-204ENST00000417292 CXXC1Q9P0U4 656 aaPredicted RBP16.65■□□□□ 0.26
SSB-204ENST00000417292 ELP1O95163 1332 aa16.65■□□□□ 0.26
SSB-204ENST00000417292 VWA5AO00534 786 aa16.64■□□□□ 0.25
SSB-204ENST00000417292 IPO8O15397 1037 aaKnown RBP16.64■□□□□ 0.25
SSB-204ENST00000417292 ADCY6O43306 1168 aa16.64■□□□□ 0.25
SSB-204ENST00000417292 PDE6AP16499 860 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms