RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 LRRC47Q8N1G4 583 aaKnown RBP31.27■■■□□ 2.6
VEGFA-207ENST00000413642 NKX2-3Q8TAU0 364 aa31.27■■■□□ 2.6
VEGFA-207ENST00000413642 SGPL1O95470 568 aa31.26■■■□□ 2.59
VEGFA-207ENST00000413642 TMEM132BQ14DG7 1078 aa31.26■■■□□ 2.59
VEGFA-207ENST00000413642 MKL1Q969V6 931 aa31.26■■■□□ 2.59
VEGFA-207ENST00000413642 XRN2Q9H0D6 950 aaKnown RBP eCLIP31.26■■■□□ 2.593e-7■■■■□ 25.4
VEGFA-207ENST00000413642 PAK6Q9NQU5 681 aaPredicted RBP31.26■■■□□ 2.59
VEGFA-207ENST00000413642 ANAPC4Q9UJX5 808 aa31.26■■■□□ 2.59
VEGFA-207ENST00000413642 ADAMTS5Q9UNA0 930 aa31.26■■■□□ 2.59
VEGFA-207ENST00000413642 SLC15A5A6NIM6 579 aa31.25■■■□□ 2.59
VEGFA-207ENST00000413642 ERCC3P19447 782 aa31.25■■■□□ 2.59
VEGFA-207ENST00000413642 CWC27Q6UX04 472 aaKnown RBP31.25■■■□□ 2.59
VEGFA-207ENST00000413642 MB21D1Q8N884 522 aa31.25■■■□□ 2.59
VEGFA-207ENST00000413642 APBA2Q99767 749 aa31.25■■■□□ 2.59
VEGFA-207ENST00000413642 PPP1R9AQ9ULJ8 1098 aa31.25■■■□□ 2.59
VEGFA-207ENST00000413642 RLFQ13129 1914 aa31.25■■■□□ 2.59
VEGFA-207ENST00000413642 NMT2O60551 498 aa31.24■■■□□ 2.59
VEGFA-207ENST00000413642 TTLL1O95922 423 aa31.24■■■□□ 2.59
VEGFA-207ENST00000413642 ZKSCAN1P17029 563 aaPredicted RBP31.24■■■□□ 2.59
VEGFA-207ENST00000413642 FLRT1Q9NZU1 646 aa31.24■■■□□ 2.59
VEGFA-207ENST00000413642 IVNS1ABPQ9Y6Y0 642 aa31.24■■■□□ 2.59
VEGFA-207ENST00000413642 PLIN4Q96Q06 1357 aa31.24■■■□□ 2.59
VEGFA-207ENST00000413642 PRKAR2AP13861 404 aaKnown RBP31.23■■■□□ 2.59
VEGFA-207ENST00000413642 HAND2P61296 217 aa31.23■■■□□ 2.59
VEGFA-207ENST00000413642 GRB14Q14449 540 aa31.23■■■□□ 2.59
VEGFA-207ENST00000413642 NPLOC4Q8TAT6 608 aa31.23■■■□□ 2.59
VEGFA-207ENST00000413642 CHMP4CQ96CF2 233 aa31.23■■■□□ 2.59
VEGFA-207ENST00000413642 IL17RBQ9NRM6 502 aa31.23■■■□□ 2.59
VEGFA-207ENST00000413642 DIAPH3Q9NSV4 1193 aa31.23■■■□□ 2.59
VEGFA-207ENST00000413642 TSPY2A6NKD2 308 aa31.22■■■□□ 2.59
VEGFA-207ENST00000413642 VWA5AO00534 786 aa31.22■■■□□ 2.59
VEGFA-207ENST00000413642 TFRCP02786 760 aaKnown RBP31.22■■■□□ 2.59
VEGFA-207ENST00000413642 GSPT1P15170 499 aaKnown RBP31.22■■■□□ 2.59
VEGFA-207ENST00000413642 MAP3K21Q5TCX8 1036 aa31.22■■■□□ 2.59
VEGFA-207ENST00000413642 NCAPG2Q86XI2 1143 aa31.22■■■□□ 2.59
VEGFA-207ENST00000413642 SHCBP1Q8NEM2 672 aa31.22■■■□□ 2.59
VEGFA-207ENST00000413642 HMX1Q9NP08 348 aaPredicted RBP31.22■■■□□ 2.59
VEGFA-207ENST00000413642 RPTORQ8N122 1335 aa31.22■■■□□ 2.59
VEGFA-207ENST00000413642 RANBP6O60518 1105 aaKnown RBP31.21■■■□□ 2.59
VEGFA-207ENST00000413642 CACNB2Q08289 660 aaPredicted RBP31.21■■■□□ 2.59
VEGFA-207ENST00000413642 REPS2Q8NFH8 660 aa31.21■■■□□ 2.59
VEGFA-207ENST00000413642 NBPF3Q9H094 633 aa31.21■■■□□ 2.59
VEGFA-207ENST00000413642 A0A0G2JMZ2 1700 aa31.21■■■□□ 2.59
VEGFA-207ENST00000413642 FGRP09769 529 aa31.2■■■□□ 2.59
VEGFA-207ENST00000413642 TTC22Q5TAA0 569 aa31.2■■■□□ 2.59
VEGFA-207ENST00000413642 PRPF38BQ5VTL8 546 aaKnown RBP31.2■■■□□ 2.59
VEGFA-207ENST00000413642 UBE2Q1Q7Z7E8 422 aa31.2■■■□□ 2.59
VEGFA-207ENST00000413642 SLF1Q9BQI6 1058 aa31.2■■■□□ 2.59
VEGFA-207ENST00000413642 TOMM22Q9NS69 142 aa31.2■■■□□ 2.59
VEGFA-207ENST00000413642 BRCA2P51587 3418 aa31.19■■■□□ 2.58
VEGFA-207ENST00000413642 ORC4O43929 436 aa31.19■■■□□ 2.58
VEGFA-207ENST00000413642 ADORA2AP29274 412 aa31.19■■■□□ 2.58
VEGFA-207ENST00000413642 RRP12Q5JTH9 1297 aaKnown RBP31.19■■■□□ 2.58
VEGFA-207ENST00000413642 SLFN13Q68D06 897 aa31.19■■■□□ 2.58
VEGFA-207ENST00000413642 TRMT44Q8IYL2 757 aaKnown RBP31.19■■■□□ 2.58
VEGFA-207ENST00000413642 CRISPLD2Q9H0B8 497 aa31.19■■■□□ 2.58
VEGFA-207ENST00000413642 COBLO75128 1261 aa31.18■■■□□ 2.58
VEGFA-207ENST00000413642 FARP2O94887 1054 aaPredicted RBP31.18■■■□□ 2.58
VEGFA-207ENST00000413642 HOXC6P09630 235 aa31.18■■■□□ 2.58
VEGFA-207ENST00000413642 CCND3P30281 292 aaPredicted RBP31.18■■■□□ 2.58
VEGFA-207ENST00000413642 GMCL1P1Q8NEA9 526 aa31.18■■■□□ 2.58
VEGFA-207ENST00000413642 IL25Q9H293 177 aa31.18■■■□□ 2.58
VEGFA-207ENST00000413642 MROH8Q9H579 483 aa31.18■■■□□ 2.58
VEGFA-207ENST00000413642 ZNF214Q9UL59 606 aaPredicted RBP31.18■■■□□ 2.58
VEGFA-207ENST00000413642 STX8Q9UNK0 236 aa31.18■■■□□ 2.58
VEGFA-207ENST00000413642 STAT3P40763 770 aa31.17■■■□□ 2.58
VEGFA-207ENST00000413642 TBC1D10CQ8IV04 446 aa31.17■■■□□ 2.58
VEGFA-207ENST00000413642 ZMYM6O95789 1325 aa31.17■■■□□ 2.58
VEGFA-207ENST00000413642 STRNO43815 780 aa31.16■■■□□ 2.58
VEGFA-207ENST00000413642 MFAP1P55081 439 aaKnown RBP31.16■■■□□ 2.58
VEGFA-207ENST00000413642 RASGRP2Q7LDG7 609 aa31.16■■■□□ 2.58
VEGFA-207ENST00000413642 DPP9Q86TI2 863 aa31.16■■■□□ 2.58
VEGFA-207ENST00000413642 RIOX2Q8IUF8 465 aa31.16■■■□□ 2.58
VEGFA-207ENST00000413642 KIFC2Q96AC6 838 aa31.16■■■□□ 2.58
VEGFA-207ENST00000413642 SYNPO2Q9UMS6 1093 aa31.16■■■□□ 2.58
VEGFA-207ENST00000413642 HIP1O00291 1037 aa31.15■■■□□ 2.58
VEGFA-207ENST00000413642 PRPF38AQ8NAV1 312 aaKnown RBP31.15■■■□□ 2.58
VEGFA-207ENST00000413642 SLC25A27O95847 323 aa31.14■■■□□ 2.58
VEGFA-207ENST00000413642 BMP3P12645 472 aa31.14■■■□□ 2.58
VEGFA-207ENST00000413642 MCCP23508 829 aa31.14■■■□□ 2.58
VEGFA-207ENST00000413642 CYP2C19P33261 490 aa31.14■■■□□ 2.58
VEGFA-207ENST00000413642 DIS3LQ8TF46 1054 aaKnown RBP31.14■■■□□ 2.58
VEGFA-207ENST00000413642 ISY1Q9ULR0 285 aaKnown RBP31.14■■■□□ 2.58
VEGFA-207ENST00000413642 MFSD14CQ5VZR4 134 aa31.13■■■□□ 2.57
VEGFA-207ENST00000413642 FEM1BQ9UK73 627 aa31.13■■■□□ 2.57
VEGFA-207ENST00000413642 MTMR7Q9Y216 660 aa31.13■■■□□ 2.57
VEGFA-207ENST00000413642 RIPK3Q9Y572 518 aa31.13■■■□□ 2.57
VEGFA-207ENST00000413642 PDE4DIPQ5VU43 2346 aa31.13■■■□□ 2.57
VEGFA-207ENST00000413642 PARP14Q460N5 1801 aa31.12■■■□□ 2.57
VEGFA-207ENST00000413642 TMEM232C9JQI7 657 aa31.12■■■□□ 2.57
VEGFA-207ENST00000413642 IGHA2P01877 340 aa31.12■■■□□ 2.57
VEGFA-207ENST00000413642 SLC4A3P48751 1232 aa31.12■■■□□ 2.57
VEGFA-207ENST00000413642 AKNAD1Q5T1N1 836 aa31.12■■■□□ 2.57
VEGFA-207ENST00000413642 CPXCR1Q8N123 301 aa31.12■■■□□ 2.57
VEGFA-207ENST00000413642 FCER1AP12319 257 aa31.11■■■□□ 2.57
VEGFA-207ENST00000413642 NOVP48745 357 aa31.11■■■□□ 2.57
VEGFA-207ENST00000413642 MFSD6Q6ZSS7 791 aa31.11■■■□□ 2.57
VEGFA-207ENST00000413642 TRPV1Q8NER1 839 aa31.11■■■□□ 2.57
VEGFA-207ENST00000413642 STAG1Q8WVM7 1258 aa31.11■■■□□ 2.57
VEGFA-207ENST00000413642 GMCL1Q96IK5 515 aa31.11■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms