RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 MIR1-1HGQ9H1L0 117 aa6.91□□□□□ -1.3
CBX1P3-201ENST00000413296 CHMP4BQ9H444 224 aaKnown RBP6.91□□□□□ -1.3
CBX1P3-201ENST00000413296 ABCB6Q9NP58 842 aa6.91□□□□□ -1.3
CBX1P3-201ENST00000413296 RAB6BQ9NRW1 208 aa6.91□□□□□ -1.3
CBX1P3-201ENST00000413296 ARHGAP28Q9P2N2 729 aa6.91□□□□□ -1.3
CBX1P3-201ENST00000413296 TMCC3Q9ULS5 477 aa6.91□□□□□ -1.3
CBX1P3-201ENST00000413296 CEP131Q9UPN4 1083 aa6.91□□□□□ -1.3
CBX1P3-201ENST00000413296 PTPN22Q9Y2R2 807 aa6.91□□□□□ -1.3
CBX1P3-201ENST00000413296 GPR52Q9Y2T5 361 aa6.91□□□□□ -1.3
CBX1P3-201ENST00000413296 TMX2Q9Y320 296 aa6.91□□□□□ -1.3
CBX1P3-201ENST00000413296 SLC12A7Q9Y666 1083 aa6.91□□□□□ -1.3
CBX1P3-201ENST00000413296 GTPBP10A4D1E9 387 aaKnown RBP6.9□□□□□ -1.3
CBX1P3-201ENST00000413296 GOLGA6L6A8MZA4 724 aa6.9□□□□□ -1.3
CBX1P3-201ENST00000413296 RIMBP2O15034 1052 aa6.9□□□□□ -1.3
CBX1P3-201ENST00000413296 GLULP15104 373 aa6.9□□□□□ -1.3
CBX1P3-201ENST00000413296 HSPA6P17066 643 aa6.9□□□□□ -1.3
CBX1P3-201ENST00000413296 IARSP41252 1262 aaKnown RBP6.9□□□□□ -1.3
CBX1P3-201ENST00000413296 USP14P54578 494 aa6.9□□□□□ -1.3
CBX1P3-201ENST00000413296 PFKPQ01813 784 aa6.9□□□□□ -1.3
CBX1P3-201ENST00000413296 ROR1Q01973 937 aa6.9□□□□□ -1.3
CBX1P3-201ENST00000413296 TRIP4Q15650 581 aaPredicted RBP6.9□□□□□ -1.3
CBX1P3-201ENST00000413296 LMBRD2Q68DH5 695 aaPredicted RBP6.9□□□□□ -1.3
CBX1P3-201ENST00000413296 RETSATQ6NUM9 610 aa6.9□□□□□ -1.3
CBX1P3-201ENST00000413296 SWSAP1Q6NVH7 229 aa6.9□□□□□ -1.3
CBX1P3-201ENST00000413296 LRRC69Q6ZNQ3 347 aa6.9□□□□□ -1.3
CBX1P3-201ENST00000413296 UBE2Q1Q7Z7E8 422 aa6.9□□□□□ -1.3
CBX1P3-201ENST00000413296 LCA5Q86VQ0 697 aa6.9□□□□□ -1.3
CBX1P3-201ENST00000413296 SCUBE1Q8IWY4 988 aa6.9□□□□□ -1.3
CBX1P3-201ENST00000413296 C1orf127Q8N9H9 656 aa6.9□□□□□ -1.3
CBX1P3-201ENST00000413296 ZSCAN1Q8NBB4 408 aa6.9□□□□□ -1.3
CBX1P3-201ENST00000413296 OR2W6PQ8NHA6 318 aa6.9□□□□□ -1.3
CBX1P3-201ENST00000413296 PMEPA1Q969W9 287 aa6.9□□□□□ -1.3
CBX1P3-201ENST00000413296 HSPBAP1Q96EW2 488 aa6.9□□□□□ -1.3
CBX1P3-201ENST00000413296 XAGE2Q96GT9 111 aa6.9□□□□□ -1.3
CBX1P3-201ENST00000413296 SPSB2Q99619 263 aa6.9□□□□□ -1.3
CBX1P3-201ENST00000413296 TM9SF2Q99805 663 aa6.9□□□□□ -1.3
CBX1P3-201ENST00000413296 UNC45AQ9H3U1 944 aa6.9□□□□□ -1.3
CBX1P3-201ENST00000413296 PRKRIP1Q9H875 184 aaPredicted RBP6.9□□□□□ -1.3
CBX1P3-201ENST00000413296 EHMT1Q9H9B1 1298 aa6.9□□□□□ -1.3
CBX1P3-201ENST00000413296 EFCC1Q9HA90 598 aa6.9□□□□□ -1.3
CBX1P3-201ENST00000413296 ZFYVE1Q9HBF4 777 aa6.9□□□□□ -1.3
CBX1P3-201ENST00000413296 TRIM39Q9HCM9 518 aa6.9□□□□□ -1.3
CBX1P3-201ENST00000413296 NMRK2Q9NPI5 230 aa6.9□□□□□ -1.3
CBX1P3-201ENST00000413296 DZANK1Q9NVP4 752 aa6.9□□□□□ -1.3
CBX1P3-201ENST00000413296 PDP2Q9P2J9 529 aa6.9□□□□□ -1.3
CBX1P3-201ENST00000413296 PCDHB14Q9Y5E9 798 aa6.9□□□□□ -1.3
CBX1P3-201ENST00000413296 TNPO3Q9Y5L0 923 aaKnown RBP6.9□□□□□ -1.3
CBX1P3-201ENST00000413296 MAGED1Q9Y5V3 778 aaPredicted RBP6.9□□□□□ -1.3
CBX1P3-201ENST00000413296 POTEMA6NI47 508 aa6.89□□□□□ -1.31
CBX1P3-201ENST00000413296 TGFBR3LH3BV60 316 aa6.89□□□□□ -1.31
CBX1P3-201ENST00000413296 K7ESF4 209 aa6.89□□□□□ -1.31
CBX1P3-201ENST00000413296 M0R3H8 397 aa6.89□□□□□ -1.31
CBX1P3-201ENST00000413296 TOR1BO14657 336 aa6.89□□□□□ -1.31
CBX1P3-201ENST00000413296 KHNYNO15037 678 aaKnown RBP6.89□□□□□ -1.31
CBX1P3-201ENST00000413296 PPFIA3O75145 1194 aa6.89□□□□□ -1.31
CBX1P3-201ENST00000413296 CILPO75339 1184 aa6.89□□□□□ -1.31
CBX1P3-201ENST00000413296 GFPT2O94808 682 aa6.89□□□□□ -1.31
CBX1P3-201ENST00000413296 BAIAP3O94812 1187 aa6.89□□□□□ -1.31
CBX1P3-201ENST00000413296 CPP00450 1065 aa6.89□□□□□ -1.31
CBX1P3-201ENST00000413296 PSMA3P25788 255 aa6.89□□□□□ -1.31
CBX1P3-201ENST00000413296 FLT3P36888 993 aa6.89□□□□□ -1.31
CBX1P3-201ENST00000413296 UBA7P41226 1012 aa6.89□□□□□ -1.31
CBX1P3-201ENST00000413296 TM4SF4P48230 202 aa6.89□□□□□ -1.31
CBX1P3-201ENST00000413296 VEGFBP49765 207 aa6.89□□□□□ -1.31
CBX1P3-201ENST00000413296 NRLP54845 237 aa6.89□□□□□ -1.31
CBX1P3-201ENST00000413296 MPP1Q00013 466 aa6.89□□□□□ -1.31
CBX1P3-201ENST00000413296 PCBP2Q15366 365 aaKnown RBP eCLIP6.89□□□□□ -1.31
CBX1P3-201ENST00000413296 NBPF8Q3BBV2 869 aa6.89□□□□□ -1.31
CBX1P3-201ENST00000413296 PRR16Q569H4 304 aa6.89□□□□□ -1.31
CBX1P3-201ENST00000413296 KIAA1614Q5VZ46 1190 aa6.89□□□□□ -1.31
CBX1P3-201ENST00000413296 POTEGQ6S5H5 508 aa6.89□□□□□ -1.31
CBX1P3-201ENST00000413296 C4orf50Q6ZRC1 276 aa6.89□□□□□ -1.31
CBX1P3-201ENST00000413296 CMTR1Q8N1G2 835 aaKnown RBP6.89□□□□□ -1.31
CBX1P3-201ENST00000413296 NSUN6Q8TEA1 469 aaKnown RBP6.89□□□□□ -1.31
CBX1P3-201ENST00000413296 ATP6V1E2Q96A05 226 aa6.89□□□□□ -1.31
CBX1P3-201ENST00000413296 CCDC34Q96HJ3 373 aa6.89□□□□□ -1.31
CBX1P3-201ENST00000413296 NUP88Q99567 741 aaPredicted RBP6.89□□□□□ -1.31
CBX1P3-201ENST00000413296 MYLK2Q9H1R3 596 aa6.89□□□□□ -1.31
CBX1P3-201ENST00000413296 CRTAC1Q9NQ79 661 aa6.89□□□□□ -1.31
CBX1P3-201ENST00000413296 ARHGEF4Q9NR80 690 aa6.89□□□□□ -1.31
CBX1P3-201ENST00000413296 TMPRSS4Q9NRS4 437 aa6.89□□□□□ -1.31
CBX1P3-201ENST00000413296 HELLSQ9NRZ9 838 aa6.89□□□□□ -1.31
CBX1P3-201ENST00000413296 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.89□□□□□ -1.31
CBX1P3-201ENST00000413296 ZNF652Q9Y2D9 606 aa6.89□□□□□ -1.31
CBX1P3-201ENST00000413296 USP20Q9Y2K6 914 aa6.89□□□□□ -1.31
CBX1P3-201ENST00000413296 LRCH1Q9Y2L9 728 aa6.89□□□□□ -1.31
CBX1P3-201ENST00000413296 PCDHB5Q9Y5E4 795 aa6.89□□□□□ -1.31
CBX1P3-201ENST00000413296 PCDHB3Q9Y5E6 796 aa6.89□□□□□ -1.31
CBX1P3-201ENST00000413296 BAZ1AQ9NRL2 1556 aaPredicted RBP6.89□□□□□ -1.31
CBX1P3-201ENST00000413296 TRIM75PA6NK02 468 aa6.88□□□□□ -1.31
CBX1P3-201ENST00000413296 FAM155AB1AL88 458 aaPredicted RBP6.88□□□□□ -1.31
CBX1P3-201ENST00000413296 FZD9O00144 591 aa6.88□□□□□ -1.31
CBX1P3-201ENST00000413296 ENC1O14682 589 aa6.88□□□□□ -1.31
CBX1P3-201ENST00000413296 NCAM2O15394 837 aa6.88□□□□□ -1.31
CBX1P3-201ENST00000413296 CTNND1O60716 968 aaKnown RBP6.88□□□□□ -1.31
CBX1P3-201ENST00000413296 IL33O95760 270 aa6.88□□□□□ -1.31
CBX1P3-201ENST00000413296 CD4P01730 458 aa6.88□□□□□ -1.31
CBX1P3-201ENST00000413296 ASLP04424 464 aa6.88□□□□□ -1.31
CBX1P3-201ENST00000413296 PYGLP06737 847 aa6.88□□□□□ -1.31
CBX1P3-201ENST00000413296 POTEJP0CG39 1038 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms