RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 FAM170BA6NMN3 283 aa7.43□□□□□ -1.22
LSM5-206ENST00000409987 AGRPO00253 132 aa7.43□□□□□ -1.22
LSM5-206ENST00000409987 ITGAVP06756 1048 aa7.43□□□□□ -1.22
LSM5-206ENST00000409987 ZNF445P59923 1031 aa7.43□□□□□ -1.22
LSM5-206ENST00000409987 RASSF7Q02833 373 aa7.43□□□□□ -1.22
LSM5-206ENST00000409987 KCNMA1Q12791 1236 aa7.43□□□□□ -1.22
LSM5-206ENST00000409987 SFRP5Q5T4F7 317 aa7.43□□□□□ -1.22
LSM5-206ENST00000409987 ADAT2Q7Z6V5 191 aaKnown RBP7.43□□□□□ -1.22
LSM5-206ENST00000409987 ZNF227Q86WZ6 799 aa7.43□□□□□ -1.22
LSM5-206ENST00000409987 FBXL21Q9UKT6 434 aa7.43□□□□□ -1.22
LSM5-206ENST00000409987 ANKRD62A6NC57 917 aa7.42□□□□□ -1.22
LSM5-206ENST00000409987 PRR33A8MZF0 331 aa7.42□□□□□ -1.22
LSM5-206ENST00000409987 PPM1BO75688 479 aa7.42□□□□□ -1.22
LSM5-206ENST00000409987 ITGA4P13612 1032 aa7.42□□□□□ -1.22
LSM5-206ENST00000409987 LONRF2Q1L5Z9 754 aa7.42□□□□□ -1.22
LSM5-206ENST00000409987 FOXB2Q5VYV0 432 aa7.42□□□□□ -1.22
LSM5-206ENST00000409987 GPAT2Q6NUI2 795 aa7.42□□□□□ -1.22
LSM5-206ENST00000409987 DTWD2Q8NBA8 298 aa7.42□□□□□ -1.22
LSM5-206ENST00000409987 LRRN4CLQ8ND94 238 aa7.42□□□□□ -1.22
LSM5-206ENST00000409987 ZSWIM2Q8NEG5 633 aa7.42□□□□□ -1.22
LSM5-206ENST00000409987 ADCY4Q8NFM4 1077 aa7.42□□□□□ -1.22
LSM5-206ENST00000409987 PPP1R14AQ96A00 147 aa7.42□□□□□ -1.22
LSM5-206ENST00000409987 COX4I2Q96KJ9 171 aa7.42□□□□□ -1.22
LSM5-206ENST00000409987 MFSD14AQ96MC6 490 aa7.42□□□□□ -1.22
LSM5-206ENST00000409987 TPSG1Q9NRR2 321 aa7.42□□□□□ -1.22
LSM5-206ENST00000409987 SUGT1Q9Y2Z0 365 aa7.42□□□□□ -1.22
LSM5-206ENST00000409987 TBX1O43435 398 aa7.41□□□□□ -1.22
LSM5-206ENST00000409987 CBX7O95931 251 aa7.41□□□□□ -1.22
LSM5-206ENST00000409987 CAPNS1P04632 268 aa7.41□□□□□ -1.22
LSM5-206ENST00000409987 PPP2R2AP63151 447 aa7.41□□□□□ -1.22
LSM5-206ENST00000409987 TKFCQ3LXA3 575 aa7.41□□□□□ -1.22
LSM5-206ENST00000409987 TMEM67Q5HYA8 995 aa7.41□□□□□ -1.22
LSM5-206ENST00000409987 RNF43Q68DV7 783 aa7.41□□□□□ -1.22
LSM5-206ENST00000409987 C22orf34Q6ZV56 151 aa7.41□□□□□ -1.22
LSM5-206ENST00000409987 C16orf86Q6ZW13 317 aa7.41□□□□□ -1.22
LSM5-206ENST00000409987 ZNF765Q7L2R6 523 aa7.41□□□□□ -1.22
LSM5-206ENST00000409987 TMC3Q7Z5M5 1100 aa7.41□□□□□ -1.22
LSM5-206ENST00000409987 KIAA0907Q7Z7F0 614 aaPredicted RBP7.41□□□□□ -1.22
LSM5-206ENST00000409987 FBXL6Q8N531 539 aa7.41□□□□□ -1.22
LSM5-206ENST00000409987 BVESQ8NE79 360 aa7.41□□□□□ -1.22
LSM5-206ENST00000409987 BRF1Q92994 677 aa7.41□□□□□ -1.22
LSM5-206ENST00000409987 RCC1LQ96I51 464 aaKnown RBP7.41□□□□□ -1.22
LSM5-206ENST00000409987 MRGPRX3Q96LB0 322 aa7.41□□□□□ -1.22
LSM5-206ENST00000409987 GFOD1Q9NXC2 390 aa7.41□□□□□ -1.22
LSM5-206ENST00000409987 LRP2BPQ9P2M1 347 aa7.41□□□□□ -1.22
LSM5-206ENST00000409987 GTF2IRD1Q9UHL9 959 aa7.41□□□□□ -1.22
LSM5-206ENST00000409987 AKT3Q9Y243 479 aa7.41□□□□□ -1.22
LSM5-206ENST00000409987 EMC9Q9Y3B6 208 aa7.41□□□□□ -1.22
LSM5-206ENST00000409987 FHOD1Q9Y613 1164 aa7.41□□□□□ -1.22
LSM5-206ENST00000409987 A0A087WZG4 1122 aa7.4□□□□□ -1.22
LSM5-206ENST00000409987 IGF2BP3O00425 579 aaKnown RBP eCLIP7.4□□□□□ -1.22
LSM5-206ENST00000409987 CLSTN1O94985 981 aa7.4□□□□□ -1.22
LSM5-206ENST00000409987 F13BP05160 661 aa7.4□□□□□ -1.22
LSM5-206ENST00000409987 ZNF865P0CJ78 1059 aaPredicted RBP7.4□□□□□ -1.22
LSM5-206ENST00000409987 KIR3DL1P43629 444 aa7.4□□□□□ -1.22
LSM5-206ENST00000409987 PLA2G4EQ3MJ16 856 aa7.4□□□□□ -1.22
LSM5-206ENST00000409987 CYP27C1Q4G0S4 372 aa7.4□□□□□ -1.22
LSM5-206ENST00000409987 YOD1Q5VVQ6 348 aaPredicted RBP7.4□□□□□ -1.22
LSM5-206ENST00000409987 ARHGEF39Q8N4T4 335 aa7.4□□□□□ -1.22
LSM5-206ENST00000409987 SYTL5Q8TDW5 730 aaPredicted RBP7.4□□□□□ -1.22
LSM5-206ENST00000409987 EXOC2Q96KP1 924 aa7.4□□□□□ -1.22
LSM5-206ENST00000409987 PRR13Q9NZ81 148 aa7.4□□□□□ -1.22
LSM5-206ENST00000409987 CGGBP1Q9UFW8 167 aaPredicted RBP7.4□□□□□ -1.22
LSM5-206ENST00000409987 U3KQE9 123 aa7.4□□□□□ -1.22
LSM5-206ENST00000409987 ASMTLO95671 621 aa7.39□□□□□ -1.23
LSM5-206ENST00000409987 GRIA2P42262 883 aa7.39□□□□□ -1.23
LSM5-206ENST00000409987 TNK2Q07912 1038 aa7.39□□□□□ -1.23
LSM5-206ENST00000409987 HSP90AA2PQ14568 343 aaPredicted RBP7.39□□□□□ -1.23
LSM5-206ENST00000409987 NOL9Q5SY16 702 aaKnown RBP7.39□□□□□ -1.23
LSM5-206ENST00000409987 TRIM59Q8IWR1 403 aa7.39□□□□□ -1.23
LSM5-206ENST00000409987 FIBCD1Q8N539 461 aa7.39□□□□□ -1.23
LSM5-206ENST00000409987 SLC26A8Q96RN1 970 aa7.39□□□□□ -1.23
LSM5-206ENST00000409987 AARSD1Q9BTE6 412 aaKnown RBP7.39□□□□□ -1.23
LSM5-206ENST00000409987 NOL6Q9H6R4 1146 aaKnown RBP7.39□□□□□ -1.23
LSM5-206ENST00000409987 CWC22Q9HCG8 908 aaKnown RBP7.39□□□□□ -1.23
LSM5-206ENST00000409987 KCNH3Q9ULD8 1083 aa7.39□□□□□ -1.23
LSM5-206ENST00000409987 MINPP1Q9UNW1 487 aa7.39□□□□□ -1.23
LSM5-206ENST00000409987 CAPN6Q9Y6Q1 641 aa7.39□□□□□ -1.23
LSM5-206ENST00000409987 TRAV20A0A0B4J274 112 aa7.38□□□□□ -1.23
LSM5-206ENST00000409987 SHISA3A0PJX4 238 aa7.38□□□□□ -1.23
LSM5-206ENST00000409987 NOP56O00567 594 aaKnown RBP7.38□□□□□ -1.23
LSM5-206ENST00000409987 PPP1R12AO14974 1030 aaPredicted RBP7.38□□□□□ -1.23
LSM5-206ENST00000409987 SIGLEC6O43699 453 aa7.38□□□□□ -1.23
LSM5-206ENST00000409987 PRAMEF1O95521 474 aa7.38□□□□□ -1.23
LSM5-206ENST00000409987 L1CAMP32004 1257 aa7.38□□□□□ -1.23
LSM5-206ENST00000409987 NFIAQ12857 509 aa7.38□□□□□ -1.23
LSM5-206ENST00000409987 NMIQ13287 307 aaPredicted RBP7.38□□□□□ -1.23
LSM5-206ENST00000409987 PPP2R5DQ14738 602 aa7.38□□□□□ -1.23
LSM5-206ENST00000409987 ZC3H12BQ5HYM0 836 aaKnown RBP7.38□□□□□ -1.23
LSM5-206ENST00000409987 FAM209AQ5JX71 171 aa7.38□□□□□ -1.23
LSM5-206ENST00000409987 MFSD4AQ8N468 514 aa7.38□□□□□ -1.23
LSM5-206ENST00000409987 BTN2A2Q8WVV5 523 aa7.38□□□□□ -1.23
LSM5-206ENST00000409987 KISS1RQ969F8 398 aaPredicted RBP7.38□□□□□ -1.23
LSM5-206ENST00000409987 PPM1GO15355 546 aaPredicted RBP7.37□□□□□ -1.23
LSM5-206ENST00000409987 OXCT1P55809 520 aa7.37□□□□□ -1.23
LSM5-206ENST00000409987 CYP27A1Q02318 531 aa7.37□□□□□ -1.23
LSM5-206ENST00000409987 FEZ1Q99689 392 aa7.37□□□□□ -1.23
LSM5-206ENST00000409987 DBNDD2Q9BQY9 259 aa7.37□□□□□ -1.23
LSM5-206ENST00000409987 CHST7Q9NS84 486 aa7.37□□□□□ -1.23
LSM5-206ENST00000409987 DIS3Q9Y2L1 958 aaKnown RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms