RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 RASGRP2Q7LDG7 609 aa26.33■■□□□ 1.81
PTCD3-203ENST00000409783 MB21D2Q8IYB1 491 aaPredicted RBP26.33■■□□□ 1.81
PTCD3-203ENST00000409783 ENAHQ8N8S7 591 aaPredicted RBP26.33■■□□□ 1.81
PTCD3-203ENST00000409783 TRIM47Q96LD4 638 aa26.33■■□□□ 1.81
PTCD3-203ENST00000409783 BTBD7Q9P203 1132 aa26.33■■□□□ 1.81
PTCD3-203ENST00000409783 ADAMTS5Q9UNA0 930 aa26.33■■□□□ 1.81
PTCD3-203ENST00000409783 RABGAP1Q9Y3P9 1069 aa26.33■■□□□ 1.81
PTCD3-203ENST00000409783 SEC23AQ15436 765 aa26.32■■□□□ 1.8
PTCD3-203ENST00000409783 ATG4CQ96DT6 458 aa26.32■■□□□ 1.8
PTCD3-203ENST00000409783 TNKSO95271 1327 aa26.32■■□□□ 1.8
PTCD3-203ENST00000409783 BMP3P12645 472 aa26.31■■□□□ 1.8
PTCD3-203ENST00000409783 MCCP23508 829 aa26.31■■□□□ 1.8
PTCD3-203ENST00000409783 PSMC4P43686 418 aa26.31■■□□□ 1.8
PTCD3-203ENST00000409783 ANTXR2P58335 489 aa26.31■■□□□ 1.8
PTCD3-203ENST00000409783 ERVK-9P63128 1117 aa26.31■■□□□ 1.8
PTCD3-203ENST00000409783 ERVK-24P63145 666 aa26.31■■□□□ 1.8
PTCD3-203ENST00000409783 TSGA10IPQ3SY00 556 aa26.31■■□□□ 1.8
PTCD3-203ENST00000409783 RALYLQ86SE5 291 aaKnown RBP26.31■■□□□ 1.8
PTCD3-203ENST00000409783 RASEFQ8IZ41 740 aa26.31■■□□□ 1.8
PTCD3-203ENST00000409783 GPRC5AQ8NFJ5 357 aa26.31■■□□□ 1.8
PTCD3-203ENST00000409783 KCNB2Q92953 911 aa26.31■■□□□ 1.8
PTCD3-203ENST00000409783 PAGR1Q9BTK6 254 aa26.31■■□□□ 1.8
PTCD3-203ENST00000409783 EFCC1Q9HA90 598 aa26.31■■□□□ 1.8
PTCD3-203ENST00000409783 PPP1R9AQ9ULJ8 1098 aa26.31■■□□□ 1.8
PTCD3-203ENST00000409783 TRIM17Q9Y577 477 aa26.31■■□□□ 1.8
PTCD3-203ENST00000409783 ECM2O94769 699 aaPredicted RBP26.3■■□□□ 1.8
PTCD3-203ENST00000409783 REC8O95072 547 aa26.3■■□□□ 1.8
PTCD3-203ENST00000409783 KIF22Q14807 665 aa26.3■■□□□ 1.8
PTCD3-203ENST00000409783 MCOLN1Q9GZU1 580 aa26.3■■□□□ 1.8
PTCD3-203ENST00000409783 RNF20Q5VTR2 975 aa26.29■■□□□ 1.8
PTCD3-203ENST00000409783 SLF1Q9BQI6 1058 aa26.29■■□□□ 1.8
PTCD3-203ENST00000409783 UBAC1Q9BSL1 405 aa26.29■■□□□ 1.8
PTCD3-203ENST00000409783 EPB41L2O43491 1005 aaKnown RBP26.28■■□□□ 1.8
PTCD3-203ENST00000409783 SNHG28P0DPA3 235 aa26.28■■□□□ 1.8
PTCD3-203ENST00000409783 HSPA4P34932 840 aa26.28■■□□□ 1.8
PTCD3-203ENST00000409783 SLC1A4P43007 532 aa26.28■■□□□ 1.8
PTCD3-203ENST00000409783 CHST3Q7LGC8 479 aa26.28■■□□□ 1.8
PTCD3-203ENST00000409783 REPS2Q8NFH8 660 aa26.28■■□□□ 1.8
PTCD3-203ENST00000409783 DCAF4Q8WV16 495 aa26.28■■□□□ 1.8
PTCD3-203ENST00000409783 CHMP4CQ96CF2 233 aa26.28■■□□□ 1.8
PTCD3-203ENST00000409783 FEM1BQ9UK73 627 aa26.28■■□□□ 1.8
PTCD3-203ENST00000409783 VWA5AO00534 786 aa26.27■■□□□ 1.8
PTCD3-203ENST00000409783 PLA2G6O60733 806 aa26.27■■□□□ 1.8
PTCD3-203ENST00000409783 GNRH1P01148 92 aa26.27■■□□□ 1.8
PTCD3-203ENST00000409783 PDHBP11177 359 aa26.27■■□□□ 1.8
PTCD3-203ENST00000409783 FCGRTP55899 365 aa26.27■■□□□ 1.8
PTCD3-203ENST00000409783 ARHGEF6Q15052 776 aa26.27■■□□□ 1.8
PTCD3-203ENST00000409783 KCTD1Q719H9 257 aa26.27■■□□□ 1.8
PTCD3-203ENST00000409783 MB21D1Q8N884 522 aa26.27■■□□□ 1.8
PTCD3-203ENST00000409783 USP26Q9BXU7 913 aa26.27■■□□□ 1.8
PTCD3-203ENST00000409783 PORCNQ9H237 461 aa26.27■■□□□ 1.8
PTCD3-203ENST00000409783 PLXNB2O15031 1838 aa26.27■■□□□ 1.8
PTCD3-203ENST00000409783 TMEM232C9JQI7 657 aa26.26■■□□□ 1.79
PTCD3-203ENST00000409783 FMNL1O95466 1100 aaPredicted RBP26.26■■□□□ 1.79
PTCD3-203ENST00000409783 PKN2Q16513 984 aaKnown RBP26.26■■□□□ 1.79
PTCD3-203ENST00000409783 ADCK5Q3MIX3 580 aa26.26■■□□□ 1.79
PTCD3-203ENST00000409783 SAMD1Q6SPF0 538 aaPredicted RBP26.26■■□□□ 1.79
PTCD3-203ENST00000409783 PRPF38AQ8NAV1 312 aaKnown RBP26.26■■□□□ 1.79
PTCD3-203ENST00000409783 PNMA1Q8ND90 353 aa26.26■■□□□ 1.79
PTCD3-203ENST00000409783 IGDCC4Q8TDY8 1250 aa26.26■■□□□ 1.79
PTCD3-203ENST00000409783 SENP2Q9HC62 589 aa26.26■■□□□ 1.79
PTCD3-203ENST00000409783 MTMR7Q9Y216 660 aa26.26■■□□□ 1.79
PTCD3-203ENST00000409783 PTPN22Q9Y2R2 807 aa26.26■■□□□ 1.79
PTCD3-203ENST00000409783 GTF3C3Q9Y5Q9 886 aa26.26■■□□□ 1.79
PTCD3-203ENST00000409783 TMEM132BQ14DG7 1078 aa26.25■■□□□ 1.79
PTCD3-203ENST00000409783 TNS4Q8IZW8 715 aa26.25■■□□□ 1.79
PTCD3-203ENST00000409783 KAT14Q9H8E8 782 aa26.25■■□□□ 1.79
PTCD3-203ENST00000409783 SRRDQ9UH36 339 aa26.25■■□□□ 1.79
PTCD3-203ENST00000409783 IFIT3O14879 490 aaKnown RBP26.24■■□□□ 1.79
PTCD3-203ENST00000409783 IFIT1BQ5T764 474 aaKnown RBP26.24■■□□□ 1.79
PTCD3-203ENST00000409783 FBXO46Q6PJ61 603 aaPredicted RBP26.24■■□□□ 1.79
PTCD3-203ENST00000409783 MTA3Q9BTC8 594 aa26.24■■□□□ 1.79
PTCD3-203ENST00000409783 MOV10L1Q9BXT6 1211 aaKnown RBP26.24■■□□□ 1.79
PTCD3-203ENST00000409783 SPATC1LQ9H0A9 340 aa26.24■■□□□ 1.79
PTCD3-203ENST00000409783 TNPO2O14787 897 aaKnown RBP26.23■■□□□ 1.79
PTCD3-203ENST00000409783 PRC1O43663 620 aa26.23■■□□□ 1.79
PTCD3-203ENST00000409783 STAT2P52630 851 aa26.23■■□□□ 1.79
PTCD3-203ENST00000409783 ZNF543Q08ER8 600 aa26.23■■□□□ 1.79
PTCD3-203ENST00000409783 TTBK2Q6IQ55 1244 aa26.23■■□□□ 1.79
PTCD3-203ENST00000409783 BTNL9Q6UXG8 535 aa26.23■■□□□ 1.79
PTCD3-203ENST00000409783 FAM160B2Q86V87 743 aa26.23■■□□□ 1.79
PTCD3-203ENST00000409783 KIFC2Q96AC6 838 aa26.23■■□□□ 1.79
PTCD3-203ENST00000409783 NEK1Q96PY6 1258 aa26.23■■□□□ 1.79
PTCD3-203ENST00000409783 GPHNQ9NQX3 736 aaPredicted RBP26.23■■□□□ 1.79
PTCD3-203ENST00000409783 ZNF214Q9UL59 606 aaPredicted RBP26.23■■□□□ 1.79
PTCD3-203ENST00000409783 GABRQQ9UN88 632 aa26.23■■□□□ 1.79
PTCD3-203ENST00000409783 SNX14Q9Y5W7 946 aa26.23■■□□□ 1.79
PTCD3-203ENST00000409783 HTTP42858 3142 aa26.23■■□□□ 1.79
PTCD3-203ENST00000409783 ZKSCAN1P17029 563 aaPredicted RBP26.22■■□□□ 1.79
PTCD3-203ENST00000409783 MAPK4P31152 587 aa26.22■■□□□ 1.79
PTCD3-203ENST00000409783 MCM5P33992 734 aa26.22■■□□□ 1.79
PTCD3-203ENST00000409783 CCNA1P78396 465 aa26.22■■□□□ 1.79
PTCD3-203ENST00000409783 CCDC96Q2M329 555 aa26.22■■□□□ 1.79
PTCD3-203ENST00000409783 CHURC1Q8WUH1 139 aa26.22■■□□□ 1.79
PTCD3-203ENST00000409783 SLC38A10Q9HBR0 1119 aa26.22■■□□□ 1.79
PTCD3-203ENST00000409783 GJD2Q9UKL4 321 aa26.22■■□□□ 1.79
PTCD3-203ENST00000409783 FRMPD2Q68DX3 1309 aaPredicted RBP26.21■■□□□ 1.79
PTCD3-203ENST00000409783 PRMT2P55345 433 aa26.21■■□□□ 1.79
PTCD3-203ENST00000409783 EXOSC10Q01780 885 aaKnown RBP26.21■■□□□ 1.79
PTCD3-203ENST00000409783 PRKCZQ05513 592 aa26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms