RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 CWF19L2Q2TBE0 894 aaKnown RBP7.21□□□□□ -1.26
CLK1-203ENST00000409769 FAM196AQ6ZSG2 479 aa7.21□□□□□ -1.26
CLK1-203ENST00000409769 GOLM1Q8NBJ4 401 aa7.21□□□□□ -1.26
CLK1-203ENST00000409769 SYTL5Q8TDW5 730 aaPredicted RBP7.21□□□□□ -1.26
CLK1-203ENST00000409769 VWCEQ96DN2 955 aa7.21□□□□□ -1.26
CLK1-203ENST00000409769 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.21□□□□□ -1.26
CLK1-203ENST00000409769 C19orf44Q9H6X5 657 aa7.21□□□□□ -1.26
CLK1-203ENST00000409769 ZNF281Q9Y2X9 895 aa7.21□□□□□ -1.26
CLK1-203ENST00000409769 NUAK1O60285 661 aa7.2□□□□□ -1.26
CLK1-203ENST00000409769 GRIN3BO60391 1043 aa7.2□□□□□ -1.26
CLK1-203ENST00000409769 FANCCQ00597 558 aa7.2□□□□□ -1.26
CLK1-203ENST00000409769 RAD51AP2Q09MP3 1159 aa7.2□□□□□ -1.26
CLK1-203ENST00000409769 LILRA6Q6PI73 481 aa7.2□□□□□ -1.26
CLK1-203ENST00000409769 TTLL10Q6ZVT0 673 aa7.2□□□□□ -1.26
CLK1-203ENST00000409769 HS2ST1Q7LGA3 356 aa7.2□□□□□ -1.26
CLK1-203ENST00000409769 LINC01599Q8WXQ3 324 aa7.2□□□□□ -1.26
CLK1-203ENST00000409769 LRRC3Q9BY71 257 aa7.2□□□□□ -1.26
CLK1-203ENST00000409769 MCOLN1Q9GZU1 580 aa7.2□□□□□ -1.26
CLK1-203ENST00000409769 ZNF552Q9H707 407 aaPredicted RBP7.2□□□□□ -1.26
CLK1-203ENST00000409769 GPR160Q9UJ42 338 aa7.2□□□□□ -1.26
CLK1-203ENST00000409769 TEX51A0A1B0GUA7 166 aa7.19□□□□□ -1.26
CLK1-203ENST00000409769 SCAMP3O14828 347 aaKnown RBP7.19□□□□□ -1.26
CLK1-203ENST00000409769 ZNF76P36508 570 aa7.19□□□□□ -1.26
CLK1-203ENST00000409769 NMIQ13287 307 aaPredicted RBP7.19□□□□□ -1.26
CLK1-203ENST00000409769 DAGLBQ8NCG7 672 aa7.19□□□□□ -1.26
CLK1-203ENST00000409769 KIF2CQ99661 725 aa7.19□□□□□ -1.26
CLK1-203ENST00000409769 SHISA3A0PJX4 238 aa7.18□□□□□ -1.26
CLK1-203ENST00000409769 F6X3S4 739 aa7.18□□□□□ -1.26
CLK1-203ENST00000409769 HRKO00198 91 aa7.18□□□□□ -1.26
CLK1-203ENST00000409769 RAG1P15918 1043 aa7.18□□□□□ -1.26
CLK1-203ENST00000409769 GARTP22102 1010 aa7.18□□□□□ -1.26
CLK1-203ENST00000409769 PDE6BP35913 854 aa7.18□□□□□ -1.26
CLK1-203ENST00000409769 KIR2DL1P43626 348 aaPredicted RBP7.18□□□□□ -1.26
CLK1-203ENST00000409769 KIR2DL2P43627 348 aaPredicted RBP7.18□□□□□ -1.26
CLK1-203ENST00000409769 DLG4P78352 724 aa7.18□□□□□ -1.26
CLK1-203ENST00000409769 FAM160A1Q05DH4 1040 aa7.18□□□□□ -1.26
CLK1-203ENST00000409769 TIGD5Q53EQ6 642 aa7.18□□□□□ -1.26
CLK1-203ENST00000409769 ZNF605Q86T29 641 aa7.18□□□□□ -1.26
CLK1-203ENST00000409769 ZNF655Q8N720 491 aaPredicted RBP7.18□□□□□ -1.26
CLK1-203ENST00000409769 HDAC8Q9BY41 377 aa7.18□□□□□ -1.26
CLK1-203ENST00000409769 KCNK12Q9HB15 430 aa7.18□□□□□ -1.26
CLK1-203ENST00000409769 KBTBD4Q9NVX7 518 aa7.18□□□□□ -1.26
CLK1-203ENST00000409769 GMIPQ9P107 970 aa7.18□□□□□ -1.26
CLK1-203ENST00000409769 SUPT16HQ9Y5B9 1047 aaKnown RBP7.18□□□□□ -1.26
CLK1-203ENST00000409769 MINDY4BA8MYZ0 360 aa7.17□□□□□ -1.26
CLK1-203ENST00000409769 ATE1O95260 518 aa7.17□□□□□ -1.26
CLK1-203ENST00000409769 ENDOUP21128 410 aaKnown RBP7.17□□□□□ -1.26
CLK1-203ENST00000409769 CCNFP41002 786 aa7.17□□□□□ -1.26
CLK1-203ENST00000409769 PCBP3P57721 371 aaKnown RBP7.17□□□□□ -1.26
CLK1-203ENST00000409769 TMEM132EQ6IEE7 984 aa7.17□□□□□ -1.26
CLK1-203ENST00000409769 CRTAC1Q9NQ79 661 aa7.17□□□□□ -1.26
CLK1-203ENST00000409769 GGT7Q9UJ14 662 aa7.17□□□□□ -1.26
CLK1-203ENST00000409769 SSU72P8A0A1W2PR75 194 aa7.16□□□□□ -1.26
CLK1-203ENST00000409769 OR14I1A6ND48 311 aa7.16□□□□□ -1.26
CLK1-203ENST00000409769 RBAK-RBAKDNI3L0D1 243 aa7.16□□□□□ -1.26
CLK1-203ENST00000409769 RFXAPO00287 272 aa7.16□□□□□ -1.26
CLK1-203ENST00000409769 GREM1O60565 184 aa7.16□□□□□ -1.26
CLK1-203ENST00000409769 DNAJA2O60884 412 aa7.16□□□□□ -1.26
CLK1-203ENST00000409769 ZNF385BQ569K4 471 aa7.16□□□□□ -1.26
CLK1-203ENST00000409769 LINC00116Q8NCU8 138 aa7.16□□□□□ -1.26
CLK1-203ENST00000409769 RNF34Q969K3 372 aa7.16□□□□□ -1.26
CLK1-203ENST00000409769 G6PC3Q9BUM1 346 aa7.16□□□□□ -1.26
CLK1-203ENST00000409769 COPRSQ9NQ92 184 aa7.16□□□□□ -1.26
CLK1-203ENST00000409769 MYOCOSA0A1B0GUC4 107 aa7.15□□□□□ -1.26
CLK1-203ENST00000409769 SLC22A31A6NKX4 558 aa7.15□□□□□ -1.26
CLK1-203ENST00000409769 NRDCO43847 1150 aa7.15□□□□□ -1.26
CLK1-203ENST00000409769 PSPNO60542 156 aa7.15□□□□□ -1.26
CLK1-203ENST00000409769 ARSHQ5FYA8 562 aa7.15□□□□□ -1.26
CLK1-203ENST00000409769 CDCP2Q5VXM1 449 aa7.15□□□□□ -1.26
CLK1-203ENST00000409769 OLFML2BQ68BL8 750 aa7.15□□□□□ -1.26
CLK1-203ENST00000409769 METTL16Q86W50 562 aaKnown RBP7.15□□□□□ -1.26
CLK1-203ENST00000409769 TMEM151BQ8IW70 566 aa7.15□□□□□ -1.26
CLK1-203ENST00000409769 USHBP1Q8N6Y0 703 aa7.15□□□□□ -1.26
CLK1-203ENST00000409769 SHISA4Q96DD7 197 aa7.15□□□□□ -1.26
CLK1-203ENST00000409769 MAP6Q96JE9 813 aa7.15□□□□□ -1.26
CLK1-203ENST00000409769 ZMYM5Q9UJ78 669 aa7.15□□□□□ -1.26
CLK1-203ENST00000409769 UBOX5O94941 541 aa7.14□□□□□ -1.27
CLK1-203ENST00000409769 INHBBP09529 407 aa7.14□□□□□ -1.27
CLK1-203ENST00000409769 RPL10P27635 214 aaKnown RBP7.14□□□□□ -1.27
CLK1-203ENST00000409769 EIF4A3P38919 411 aaKnown RBP7.14□□□□□ -1.27
CLK1-203ENST00000409769 SLC14A2Q15849 920 aa7.14□□□□□ -1.27
CLK1-203ENST00000409769 NBPF9Q3BBW0 867 aa7.14□□□□□ -1.27
CLK1-203ENST00000409769 NBPF12Q5TAG4 269 aaPredicted RBP7.14□□□□□ -1.27
CLK1-203ENST00000409769 WAPLQ7Z5K2 1190 aa7.14□□□□□ -1.27
CLK1-203ENST00000409769 NLRX1Q86UT6 975 aa7.14□□□□□ -1.27
CLK1-203ENST00000409769 FBXO27Q8NI29 283 aa7.14□□□□□ -1.27
CLK1-203ENST00000409769 TCTN2Q96GX1 697 aa7.14□□□□□ -1.27
CLK1-203ENST00000409769 EBF1Q9UH73 591 aa7.14□□□□□ -1.27
CLK1-203ENST00000409769 TCFL5Q9UL49 500 aa7.14□□□□□ -1.27
CLK1-203ENST00000409769 CNOT6Q9ULM6 557 aaKnown RBP7.14□□□□□ -1.27
CLK1-203ENST00000409769 PCDHB14Q9Y5E9 798 aa7.14□□□□□ -1.27
CLK1-203ENST00000409769 NCANO14594 1321 aa7.13□□□□□ -1.27
CLK1-203ENST00000409769 KRTAP9-7A8MTY7 169 aa7.13□□□□□ -1.27
CLK1-203ENST00000409769 FBXL19Q6PCT2 694 aa7.13□□□□□ -1.27
CLK1-203ENST00000409769 IRF2BPLQ9H1B7 796 aa7.13□□□□□ -1.27
CLK1-203ENST00000409769 EHMT1Q9H9B1 1298 aa7.13□□□□□ -1.27
CLK1-203ENST00000409769 ADAMTS1Q9UHI8 967 aa7.13□□□□□ -1.27
CLK1-203ENST00000409769 B8ZZF3 427 aa7.12□□□□□ -1.27
CLK1-203ENST00000409769 ABLIM1O14639 778 aa7.12□□□□□ -1.27
CLK1-203ENST00000409769 PRRG2O14669 202 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms