RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 SLC25A27O95847 323 aa17.32■□□□□ 0.36
NIF3L1-205ENST00000409588 ABRAQ8N0Z2 381 aa17.32■□□□□ 0.36
NIF3L1-205ENST00000409588 SPATC1LQ9H0A9 340 aa17.32■□□□□ 0.36
NIF3L1-205ENST00000409588 NAPBQ9H115 298 aa17.32■□□□□ 0.36
NIF3L1-205ENST00000409588 BAZ2AQ9UIF9 1905 aaKnown RBP17.31■□□□□ 0.36
NIF3L1-205ENST00000409588 FARP2O94887 1054 aaPredicted RBP17.31■□□□□ 0.36
NIF3L1-205ENST00000409588 COPB2P35606 906 aa17.31■□□□□ 0.36
NIF3L1-205ENST00000409588 ATP2B2Q01814 1243 aa17.31■□□□□ 0.36
NIF3L1-205ENST00000409588 GRB14Q14449 540 aa17.31■□□□□ 0.36
NIF3L1-205ENST00000409588 TRIB2Q92519 343 aa17.31■□□□□ 0.36
NIF3L1-205ENST00000409588 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.31■□□□□ 0.36
NIF3L1-205ENST00000409588 ALX1Q15699 326 aa17.3■□□□□ 0.36
NIF3L1-205ENST00000409588 WDR78Q5VTH9 848 aa17.3■□□□□ 0.36
NIF3L1-205ENST00000409588 MFSD14CQ5VZR4 134 aa17.3■□□□□ 0.36
NIF3L1-205ENST00000409588 SPICE1Q8N0Z3 855 aa17.3■□□□□ 0.36
NIF3L1-205ENST00000409588 DPF3Q92784 378 aa17.3■□□□□ 0.36
NIF3L1-205ENST00000409588 MOV10L1Q9BXT6 1211 aaKnown RBP17.3■□□□□ 0.36
NIF3L1-205ENST00000409588 OSBPL3Q9H4L5 887 aa17.3■□□□□ 0.36
NIF3L1-205ENST00000409588 EPB41L4AQ9HCS5 686 aaPredicted RBP17.3■□□□□ 0.36
NIF3L1-205ENST00000409588 NR2E3Q9Y5X4 410 aa17.3■□□□□ 0.36
NIF3L1-205ENST00000409588 MYH8P13535 1937 aa17.29■□□□□ 0.36
NIF3L1-205ENST00000409588 F5H6K3 240 aa17.29■□□□□ 0.36
NIF3L1-205ENST00000409588 SMIM22K7EJ46 135 aa17.29■□□□□ 0.36
NIF3L1-205ENST00000409588 PEX10O60683 326 aa17.29■□□□□ 0.36
NIF3L1-205ENST00000409588 TTLL1O95922 423 aa17.29■□□□□ 0.36
NIF3L1-205ENST00000409588 MFAP1P55081 439 aaKnown RBP17.29■□□□□ 0.36
NIF3L1-205ENST00000409588 NUCB1Q02818 461 aa17.29■□□□□ 0.36
NIF3L1-205ENST00000409588 KLRC3Q07444 240 aa17.29■□□□□ 0.36
NIF3L1-205ENST00000409588 MCMDC2Q4G0Z9 681 aa17.29■□□□□ 0.36
NIF3L1-205ENST00000409588 KIAA1755Q5JYT7 1200 aa17.29■□□□□ 0.36
NIF3L1-205ENST00000409588 NECAB2Q7Z6G3 386 aa17.29■□□□□ 0.36
NIF3L1-205ENST00000409588 DPP9Q86TI2 863 aa17.29■□□□□ 0.36
NIF3L1-205ENST00000409588 CHD1LQ86WJ1 897 aa17.29■□□□□ 0.36
NIF3L1-205ENST00000409588 NEDD1Q8NHV4 660 aa17.29■□□□□ 0.36
NIF3L1-205ENST00000409588 SEC62Q99442 399 aaKnown RBP17.29■□□□□ 0.36
NIF3L1-205ENST00000409588 MTMR4Q9NYA4 1195 aa17.29■□□□□ 0.36
NIF3L1-205ENST00000409588 IGKV6D-41A0A0C4DH26 115 aa17.28■□□□□ 0.36
NIF3L1-205ENST00000409588 MSCO60682 206 aa17.28■□□□□ 0.36
NIF3L1-205ENST00000409588 TSPY3P0CV98 308 aa17.28■□□□□ 0.36
NIF3L1-205ENST00000409588 TSPY8P0CW00 308 aa17.28■□□□□ 0.36
NIF3L1-205ENST00000409588 FDX1P10109 184 aa17.28■□□□□ 0.36
NIF3L1-205ENST00000409588 PPARAQ07869 468 aa17.28■□□□□ 0.36
NIF3L1-205ENST00000409588 CACNB2Q08289 660 aaPredicted RBP17.28■□□□□ 0.36
NIF3L1-205ENST00000409588 PRPF38AQ8NAV1 312 aaKnown RBP17.28■□□□□ 0.36
NIF3L1-205ENST00000409588 CLIP2Q9UDT6 1046 aa17.28■□□□□ 0.36
NIF3L1-205ENST00000409588 ANAPC4Q9UJX5 808 aa17.28■□□□□ 0.36
NIF3L1-205ENST00000409588 OGDHLQ9ULD0 1010 aa17.28■□□□□ 0.36
NIF3L1-205ENST00000409588 PPP1R9AQ9ULJ8 1098 aa17.28■□□□□ 0.36
NIF3L1-205ENST00000409588 VWA5AO00534 786 aa17.27■□□□□ 0.36
NIF3L1-205ENST00000409588 FCER1AP12319 257 aa17.27■□□□□ 0.36
NIF3L1-205ENST00000409588 ERCC3P19447 782 aa17.27■□□□□ 0.36
NIF3L1-205ENST00000409588 OLFML2BQ68BL8 750 aa17.27■□□□□ 0.36
NIF3L1-205ENST00000409588 LNPKQ9C0E8 428 aa17.27■□□□□ 0.36
NIF3L1-205ENST00000409588 NBPF3Q9H094 633 aa17.27■□□□□ 0.36
NIF3L1-205ENST00000409588 TRIM6-TRIM34B2RNG4 842 aa17.26■□□□□ 0.35
NIF3L1-205ENST00000409588 STAT3P40763 770 aa17.26■□□□□ 0.35
NIF3L1-205ENST00000409588 NT5C2P49902 561 aa17.26■□□□□ 0.35
NIF3L1-205ENST00000409588 PLS1Q14651 629 aa17.26■□□□□ 0.35
NIF3L1-205ENST00000409588 RIOX2Q8IUF8 465 aa17.26■□□□□ 0.35
NIF3L1-205ENST00000409588 CLEC10AQ8IUN9 316 aa17.26■□□□□ 0.35
NIF3L1-205ENST00000409588 GMCL1P1Q8NEA9 526 aa17.26■□□□□ 0.35
NIF3L1-205ENST00000409588 EXOC6Q8TAG9 804 aa17.26■□□□□ 0.35
NIF3L1-205ENST00000409588 ATG4CQ96DT6 458 aa17.26■□□□□ 0.35
NIF3L1-205ENST00000409588 DIS3Q9Y2L1 958 aaKnown RBP17.26■□□□□ 0.35
NIF3L1-205ENST00000409588 PLIN4Q96Q06 1357 aa17.26■□□□□ 0.35
NIF3L1-205ENST00000409588 PLXNB2O15031 1838 aa17.26■□□□□ 0.35
NIF3L1-205ENST00000409588 HIP1O00291 1037 aa17.25■□□□□ 0.35
NIF3L1-205ENST00000409588 ATP2A1O14983 1001 aa17.25■□□□□ 0.35
NIF3L1-205ENST00000409588 RAD21O60216 631 aa17.25■□□□□ 0.35
NIF3L1-205ENST00000409588 IGHA2P01877 340 aa17.25■□□□□ 0.35
NIF3L1-205ENST00000409588 IGHDP01880 384 aa17.25■□□□□ 0.35
NIF3L1-205ENST00000409588 PCP11498 1178 aaKnown RBP17.25■□□□□ 0.35
NIF3L1-205ENST00000409588 ADORA2AP29274 412 aa17.25■□□□□ 0.35
NIF3L1-205ENST00000409588 TFAP4Q01664 338 aa17.25■□□□□ 0.35
NIF3L1-205ENST00000409588 TRIM32Q13049 653 aa17.25■□□□□ 0.35
NIF3L1-205ENST00000409588 TMEM132BQ14DG7 1078 aa17.25■□□□□ 0.35
NIF3L1-205ENST00000409588 FAM83BQ5T0W9 1011 aa17.25■□□□□ 0.35
NIF3L1-205ENST00000409588 B4GALNT3Q6L9W6 998 aa17.25■□□□□ 0.35
NIF3L1-205ENST00000409588 NCAPG2Q86XI2 1143 aa17.25■□□□□ 0.35
NIF3L1-205ENST00000409588 CEP95Q96GE4 821 aa17.25■□□□□ 0.35
NIF3L1-205ENST00000409588 PAWRQ96IZ0 340 aaKnown RBP17.25■□□□□ 0.35
NIF3L1-205ENST00000409588 SLF1Q9BQI6 1058 aa17.25■□□□□ 0.35
NIF3L1-205ENST00000409588 FEM1BQ9UK73 627 aa17.25■□□□□ 0.35
NIF3L1-205ENST00000409588 ZMYM6O95789 1325 aa17.24■□□□□ 0.35
NIF3L1-205ENST00000409588 POTEB2H3BUK9 544 aa17.24■□□□□ 0.35
NIF3L1-205ENST00000409588 ZBED4O75132 1171 aa17.24■□□□□ 0.35
NIF3L1-205ENST00000409588 PRDM1O75626 825 aa17.24■□□□□ 0.35
NIF3L1-205ENST00000409588 FGRP09769 529 aa17.24■□□□□ 0.35
NIF3L1-205ENST00000409588 CCL14Q16627 93 aa17.24■□□□□ 0.35
NIF3L1-205ENST00000409588 PLEKHM2Q8IWE5 1019 aa17.24■□□□□ 0.35
NIF3L1-205ENST00000409588 STK11IPQ8N1F8 1099 aa17.24■□□□□ 0.35
NIF3L1-205ENST00000409588 NRBP1Q9UHY1 535 aa17.24■□□□□ 0.35
NIF3L1-205ENST00000409588 SUPT16HQ9Y5B9 1047 aaKnown RBP17.24■□□□□ 0.35
NIF3L1-205ENST00000409588 ORC4O43929 436 aa17.23■□□□□ 0.35
NIF3L1-205ENST00000409588 EVI5O60447 810 aa17.23■□□□□ 0.35
NIF3L1-205ENST00000409588 SLC34A2O95436 690 aa17.23■□□□□ 0.35
NIF3L1-205ENST00000409588 NDUFB10O96000 172 aa17.23■□□□□ 0.35
NIF3L1-205ENST00000409588 OAZ1P54368 228 aa17.23■□□□□ 0.35
NIF3L1-205ENST00000409588 KCTD2Q14681 263 aa17.23■□□□□ 0.35
NIF3L1-205ENST00000409588 CHURC1Q8WUH1 139 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms