RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 ARL6IP4Q66PJ3 421 aaKnown RBP19.12■□□□□ 0.65
NUP50-203ENST00000407019 CERS3Q8IU89 383 aa19.12■□□□□ 0.65
NUP50-203ENST00000407019 GPR101Q96P66 508 aaPredicted RBP19.12■□□□□ 0.65
NUP50-203ENST00000407019 BAG1Q99933 345 aaPredicted RBP19.12■□□□□ 0.65
NUP50-203ENST00000407019 L2HGDHQ9H9P8 463 aa19.12■□□□□ 0.65
NUP50-203ENST00000407019 MAD2L2Q9UI95 211 aa19.12■□□□□ 0.65
NUP50-203ENST00000407019 FAM205AQ6ZU69 1335 aa19.11■□□□□ 0.65
NUP50-203ENST00000407019 USP17L3A6NCW0 530 aa19.11■□□□□ 0.65
NUP50-203ENST00000407019 USP17L4A6NCW7 530 aa19.11■□□□□ 0.65
NUP50-203ENST00000407019 ZSCAN12O43309 604 aa19.11■□□□□ 0.65
NUP50-203ENST00000407019 ETF1P62495 437 aaKnown RBP19.11■□□□□ 0.65
NUP50-203ENST00000407019 GPSM2P81274 684 aa19.11■□□□□ 0.65
NUP50-203ENST00000407019 IL17AQ16552 155 aa19.11■□□□□ 0.65
NUP50-203ENST00000407019 USP17L1Q7RTZ2 530 aa19.11■□□□□ 0.65
NUP50-203ENST00000407019 RTFDC1Q9BY42 306 aaPredicted RBP19.11■□□□□ 0.65
NUP50-203ENST00000407019 PHLPP2Q6ZVD8 1323 aa19.1■□□□□ 0.65
NUP50-203ENST00000407019 LONP1P36776 959 aaKnown RBP19.1■□□□□ 0.65
NUP50-203ENST00000407019 STX17P56962 302 aa19.1■□□□□ 0.65
NUP50-203ENST00000407019 PRR5LQ6MZQ0 368 aa19.1■□□□□ 0.65
NUP50-203ENST00000407019 PDXDC2PQ6P474 469 aa19.1■□□□□ 0.65
NUP50-203ENST00000407019 TC2NQ8N9U0 490 aa19.1■□□□□ 0.65
NUP50-203ENST00000407019 PPP1R3GB7ZBB8 358 aa19.1■□□□□ 0.65
NUP50-203ENST00000407019 STX10O60499 249 aa19.1■□□□□ 0.65
NUP50-203ENST00000407019 ADRA2BP18089 450 aa19.1■□□□□ 0.65
NUP50-203ENST00000407019 MAPKAPK5Q8IW41 473 aa19.1■□□□□ 0.65
NUP50-203ENST00000407019 REXO1L1PQ8IX06 675 aa19.1■□□□□ 0.65
NUP50-203ENST00000407019 SLC44A5Q8NCS7 719 aa19.1■□□□□ 0.65
NUP50-203ENST00000407019 CCDC148Q8NFR7 591 aa19.1■□□□□ 0.65
NUP50-203ENST00000407019 ZNF287Q9HBT7 754 aa19.1■□□□□ 0.65
NUP50-203ENST00000407019 SAP30BPQ9UHR5 308 aaKnown RBP19.1■□□□□ 0.65
NUP50-203ENST00000407019 GTPBP6O43824 516 aaPredicted RBP19.09■□□□□ 0.65
NUP50-203ENST00000407019 UFL1O94874 794 aa19.09■□□□□ 0.65
NUP50-203ENST00000407019 RASA1P20936 1047 aa19.09■□□□□ 0.65
NUP50-203ENST00000407019 ATP2B4P23634 1241 aa19.09■□□□□ 0.65
NUP50-203ENST00000407019 TXLNAP40222 546 aa19.09■□□□□ 0.65
NUP50-203ENST00000407019 CDKAL1Q5VV42 579 aa19.09■□□□□ 0.65
NUP50-203ENST00000407019 APTXQ7Z2E3 356 aaKnown RBP19.09■□□□□ 0.65
NUP50-203ENST00000407019 SMYD4Q8IYR2 804 aaPredicted RBP19.09■□□□□ 0.65
NUP50-203ENST00000407019 C4orf32Q8N8J7 132 aa19.09■□□□□ 0.65
NUP50-203ENST00000407019 CERKQ8TCT0 537 aa19.09■□□□□ 0.65
NUP50-203ENST00000407019 STAMQ92783 540 aa19.09■□□□□ 0.65
NUP50-203ENST00000407019 CD209Q9NNX6 404 aa19.09■□□□□ 0.65
NUP50-203ENST00000407019 CCDC194A0A1B0GVG4 234 aa19.09■□□□□ 0.65
NUP50-203ENST00000407019 BTDP43251 543 aa19.09■□□□□ 0.65
NUP50-203ENST00000407019 GALNT17Q6IS24 598 aa19.09■□□□□ 0.65
NUP50-203ENST00000407019 DAGLBQ8NCG7 672 aa19.09■□□□□ 0.65
NUP50-203ENST00000407019 CTAGE1Q96RT6 745 aa19.09■□□□□ 0.65
NUP50-203ENST00000407019 BCL11BQ9C0K0 894 aaPredicted RBP19.09■□□□□ 0.65
NUP50-203ENST00000407019 BLZF1Q9H2G9 400 aa19.09■□□□□ 0.65
NUP50-203ENST00000407019 PPP2R2CQ9Y2T4 447 aa19.09■□□□□ 0.65
NUP50-203ENST00000407019 SPATA31A6Q5VVP1 1343 aa19.08■□□□□ 0.64
NUP50-203ENST00000407019 M0R2N6 131 aa19.08■□□□□ 0.64
NUP50-203ENST00000407019 ADKP55263 362 aaKnown RBP19.08■□□□□ 0.64
NUP50-203ENST00000407019 WWC2Q6AWC2 1192 aa19.08■□□□□ 0.64
NUP50-203ENST00000407019 TYW1BQ6NUM6 668 aa19.08■□□□□ 0.64
NUP50-203ENST00000407019 RASGRP4Q8TDF6 673 aa19.08■□□□□ 0.64
NUP50-203ENST00000407019 TMEM47Q9BQJ4 181 aa19.08■□□□□ 0.64
NUP50-203ENST00000407019 LZTS2Q9BRK4 669 aa19.08■□□□□ 0.64
NUP50-203ENST00000407019 DNAI1Q9UI46 699 aa19.08■□□□□ 0.64
NUP50-203ENST00000407019 GGA1Q9UJY5 639 aa19.08■□□□□ 0.64
NUP50-203ENST00000407019 STX8Q9UNK0 236 aa19.08■□□□□ 0.64
NUP50-203ENST00000407019 CTNND2Q9UQB3 1225 aa19.08■□□□□ 0.64
NUP50-203ENST00000407019 BAZ2BQ9UIF8 2168 aaKnown RBP19.08■□□□□ 0.64
NUP50-203ENST00000407019 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.07■□□□□ 0.64
NUP50-203ENST00000407019 GOLGA6L9A6NEM1 432 aa19.07■□□□□ 0.64
NUP50-203ENST00000407019 ST5P78524 1137 aa19.07■□□□□ 0.64
NUP50-203ENST00000407019 SLC35G1Q2M3R5 365 aa19.07■□□□□ 0.64
NUP50-203ENST00000407019 CRY2Q49AN0 593 aa19.07■□□□□ 0.64
NUP50-203ENST00000407019 CCDC93Q567U6 631 aa19.07■□□□□ 0.64
NUP50-203ENST00000407019 TRIM65Q6PJ69 517 aa19.07■□□□□ 0.64
NUP50-203ENST00000407019 HEATR3Q7Z4Q2 680 aa19.07■□□□□ 0.64
NUP50-203ENST00000407019 PCDHA6Q9UN73 950 aa19.07■□□□□ 0.64
NUP50-203ENST00000407019 PCDHA8Q9Y5H6 950 aa19.07■□□□□ 0.64
NUP50-203ENST00000407019 PALM3A6NDB9 673 aaPredicted RBP19.07■□□□□ 0.64
NUP50-203ENST00000407019 CYTH3O43739 400 aa19.07■□□□□ 0.64
NUP50-203ENST00000407019 IL1R1P14778 569 aa19.07■□□□□ 0.64
NUP50-203ENST00000407019 FILIP1LQ4L180 1135 aa19.07■□□□□ 0.64
NUP50-203ENST00000407019 FAM177A1Q8N128 213 aaPredicted RBP19.07■□□□□ 0.64
NUP50-203ENST00000407019 RBM17Q96I25 401 aaKnown RBP19.07■□□□□ 0.64
NUP50-203ENST00000407019 RMND1Q9NWS8 449 aa19.07■□□□□ 0.64
NUP50-203ENST00000407019 BARHL2Q9NY43 387 aa19.07■□□□□ 0.64
NUP50-203ENST00000407019 ADD3Q9UEY8 706 aaKnown RBP19.07■□□□□ 0.64
NUP50-203ENST00000407019 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.07■□□□□ 0.64
NUP50-203ENST00000407019 MTMR7Q9Y216 660 aa19.07■□□□□ 0.64
NUP50-203ENST00000407019 V9GYY5 206 aaPredicted RBP19.07■□□□□ 0.64
NUP50-203ENST00000407019 SNED1Q8TER0 1413 aa19.07■□□□□ 0.64
NUP50-203ENST00000407019 GPR75-ASB3A0A0A6YYF3 556 aa19.06■□□□□ 0.64
NUP50-203ENST00000407019 AKR1B15C9JRZ8 316 aaPredicted RBP19.06■□□□□ 0.64
NUP50-203ENST00000407019 STXBP3O00186 592 aa19.06■□□□□ 0.64
NUP50-203ENST00000407019 TEX33O43247 280 aa19.06■□□□□ 0.64
NUP50-203ENST00000407019 RRAGBQ5VZM2 374 aa19.06■□□□□ 0.64
NUP50-203ENST00000407019 C16orf86Q6ZW13 317 aa19.06■□□□□ 0.64
NUP50-203ENST00000407019 TEX11Q8IYF3 940 aa19.06■□□□□ 0.64
NUP50-203ENST00000407019 GJD4Q96KN9 370 aaPredicted RBP19.06■□□□□ 0.64
NUP50-203ENST00000407019 MTRQ99707 1265 aa19.06■□□□□ 0.64
NUP50-203ENST00000407019 LRRC4BQ9NT99 713 aa19.06■□□□□ 0.64
NUP50-203ENST00000407019 PLCG2P16885 1265 aa19.05■□□□□ 0.64
NUP50-203ENST00000407019 ELF2Q15723 593 aa19.05■□□□□ 0.64
NUP50-203ENST00000407019 ZNF397Q8NF99 534 aaPredicted RBP19.05■□□□□ 0.64
NUP50-203ENST00000407019 FEZ1Q99689 392 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms