RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 MIER3Q7Z3K6 550 aa20.16■□□□□ 0.82
COL18A1-204ENST00000400337 TAF12Q16514 161 aa20.16■□□□□ 0.82
COL18A1-204ENST00000400337 MYOCDQ8IZQ8 938 aa20.16■□□□□ 0.82
COL18A1-204ENST00000400337 IFIH1Q9BYX4 1025 aaKnown RBP20.16■□□□□ 0.82
COL18A1-204ENST00000400337 GPHNQ9NQX3 736 aaPredicted RBP20.16■□□□□ 0.82
COL18A1-204ENST00000400337 PTGDRQ13258 359 aa20.16■□□□□ 0.82
COL18A1-204ENST00000400337 PI16Q6UXB8 463 aa20.16■□□□□ 0.82
COL18A1-204ENST00000400337 SIRT2Q8IXJ6 389 aa20.16■□□□□ 0.82
COL18A1-204ENST00000400337 KLHL7Q8IXQ5 586 aa20.16■□□□□ 0.82
COL18A1-204ENST00000400337 NOD1Q9Y239 953 aa20.16■□□□□ 0.82
COL18A1-204ENST00000400337 ICA1Q05084 483 aa20.16■□□□□ 0.82
COL18A1-204ENST00000400337 UAP1Q16222 522 aaPredicted RBP20.16■□□□□ 0.82
COL18A1-204ENST00000400337 CDAN1Q8IWY9 1227 aa20.15■□□□□ 0.82
COL18A1-204ENST00000400337 MYRIPQ8NFW9 859 aa20.15■□□□□ 0.82
COL18A1-204ENST00000400337 TRIM6Q9C030 488 aaPredicted RBP20.15■□□□□ 0.82
COL18A1-204ENST00000400337 IRX3P78415 501 aaPredicted RBP20.15■□□□□ 0.82
COL18A1-204ENST00000400337 IFT20Q8IY31 132 aa20.15■□□□□ 0.82
COL18A1-204ENST00000400337 FAM170AA1A519 330 aa20.15■□□□□ 0.82
COL18A1-204ENST00000400337 TESPA1A2RU30 521 aaPredicted RBP20.15■□□□□ 0.82
COL18A1-204ENST00000400337 LRMPQ12912 555 aa20.15■□□□□ 0.82
COL18A1-204ENST00000400337 APOA5Q6Q788 366 aa20.15■□□□□ 0.82
COL18A1-204ENST00000400337 MICALL1Q8N3F8 863 aa20.15■□□□□ 0.82
COL18A1-204ENST00000400337 SAMD15Q9P1V8 674 aa20.15■□□□□ 0.82
COL18A1-204ENST00000400337 ALAS1P13196 640 aa20.15■□□□□ 0.82
COL18A1-204ENST00000400337 FLAD1Q8NFF5 587 aa20.15■□□□□ 0.82
COL18A1-204ENST00000400337 FANCLQ9NW38 375 aa20.15■□□□□ 0.82
COL18A1-204ENST00000400337 USTQ9Y2C2 406 aa20.15■□□□□ 0.82
COL18A1-204ENST00000400337 TNFAIP1Q13829 316 aa20.14■□□□□ 0.82
COL18A1-204ENST00000400337 GPATCH11Q8N954 259 aa20.14■□□□□ 0.82
COL18A1-204ENST00000400337 PPM1EQ8WY54 764 aa20.14■□□□□ 0.82
COL18A1-204ENST00000400337 CD19P15391 556 aa20.14■□□□□ 0.81
COL18A1-204ENST00000400337 SYMPKQ92797 1274 aaKnown RBP20.14■□□□□ 0.81
COL18A1-204ENST00000400337 SMC6Q96SB8 1091 aa20.14■□□□□ 0.81
COL18A1-204ENST00000400337 LSM14BQ9BX40 385 aaKnown RBP20.14■□□□□ 0.81
COL18A1-204ENST00000400337 H7C1D1 291 aa20.14■□□□□ 0.81
COL18A1-204ENST00000400337 GNA14O95837 355 aa20.14■□□□□ 0.81
COL18A1-204ENST00000400337 PCP11498 1178 aaKnown RBP20.14■□□□□ 0.81
COL18A1-204ENST00000400337 CYP2J2P51589 502 aa20.14■□□□□ 0.81
COL18A1-204ENST00000400337 RPS6KA1Q15418 735 aa20.14■□□□□ 0.81
COL18A1-204ENST00000400337 GALNT17Q6IS24 598 aa20.14■□□□□ 0.81
COL18A1-204ENST00000400337 OR8K1Q8NGG5 319 aa20.14■□□□□ 0.81
COL18A1-204ENST00000400337 NUCKS1Q9H1E3 243 aaKnown RBP20.14■□□□□ 0.81
COL18A1-204ENST00000400337 XDHP47989 1333 aa20.14■□□□□ 0.81
COL18A1-204ENST00000400337 KCNQ4P56696 695 aa20.14■□□□□ 0.81
COL18A1-204ENST00000400337 MRPS9P82933 396 aaKnown RBP20.14■□□□□ 0.81
COL18A1-204ENST00000400337 PTPN12Q05209 780 aaKnown RBP20.14■□□□□ 0.81
COL18A1-204ENST00000400337 DCUN1D2Q6PH85 259 aa20.14■□□□□ 0.81
COL18A1-204ENST00000400337 DAAM2Q86T65 1068 aa20.14■□□□□ 0.81
COL18A1-204ENST00000400337 NKIRAS1Q9NYS0 192 aa20.14■□□□□ 0.81
COL18A1-204ENST00000400337 KRT19P08727 400 aa20.13■□□□□ 0.81
COL18A1-204ENST00000400337 XRCC5P13010 732 aaKnown RBP20.13■□□□□ 0.81
COL18A1-204ENST00000400337 DYNLL1P63167 89 aaKnown RBP20.13■□□□□ 0.81
COL18A1-204ENST00000400337 FBXO11Q86XK2 927 aa20.13■□□□□ 0.81
COL18A1-204ENST00000400337 FAM204AQ9H8W3 233 aa20.13■□□□□ 0.81
COL18A1-204ENST00000400337 DDX25Q9UHL0 483 aaKnown RBP20.13■□□□□ 0.81
COL18A1-204ENST00000400337 CCDC14Q49A88 953 aa20.13■□□□□ 0.81
COL18A1-204ENST00000400337 PEX26Q7Z412 305 aa20.13■□□□□ 0.81
COL18A1-204ENST00000400337 NLRP10Q86W26 655 aa20.13■□□□□ 0.81
COL18A1-204ENST00000400337 KIAA1524Q8TCG1 905 aa20.13■□□□□ 0.81
COL18A1-204ENST00000400337 MRRFQ96E11 262 aaKnown RBP20.13■□□□□ 0.81
COL18A1-204ENST00000400337 BCS1LQ9Y276 419 aa20.13■□□□□ 0.81
COL18A1-204ENST00000400337 PRDM15P57071 1507 aaPredicted RBP20.13■□□□□ 0.81
COL18A1-204ENST00000400337 BAG6P46379 1132 aa20.13■□□□□ 0.81
COL18A1-204ENST00000400337 SLFN13Q68D06 897 aa20.13■□□□□ 0.81
COL18A1-204ENST00000400337 CCDC51Q96ER9 411 aa20.13■□□□□ 0.81
COL18A1-204ENST00000400337 DESI2Q9BSY9 194 aa20.13■□□□□ 0.81
COL18A1-204ENST00000400337 ADD2P35612 726 aa20.13■□□□□ 0.81
COL18A1-204ENST00000400337 DNM2P50570 870 aa20.13■□□□□ 0.81
COL18A1-204ENST00000400337 ERFEQ4G0M1 354 aa20.13■□□□□ 0.81
COL18A1-204ENST00000400337 TRIML1Q8N9V2 468 aa20.13■□□□□ 0.81
COL18A1-204ENST00000400337 MYO1AQ9UBC5 1043 aa20.13■□□□□ 0.81
COL18A1-204ENST00000400337 E7EVH7 732 aa20.13■□□□□ 0.81
COL18A1-204ENST00000400337 NDC80O14777 642 aa20.13■□□□□ 0.81
COL18A1-204ENST00000400337 GTPBP6O43824 516 aaPredicted RBP20.13■□□□□ 0.81
COL18A1-204ENST00000400337 TNNI1P19237 187 aa20.13■□□□□ 0.81
COL18A1-204ENST00000400337 NSUN7Q8NE18 718 aaKnown RBP20.13■□□□□ 0.81
COL18A1-204ENST00000400337 RTEL1Q9NZ71 1219 aa20.13■□□□□ 0.81
COL18A1-204ENST00000400337 POLR2MP0CAP2 368 aa20.12■□□□□ 0.81
COL18A1-204ENST00000400337 RBM6P78332 1123 aaKnown RBP20.12■□□□□ 0.81
COL18A1-204ENST00000400337 GLG1Q92896 1179 aa20.12■□□□□ 0.81
COL18A1-204ENST00000400337 AFAP1L1Q8TED9 768 aa20.12■□□□□ 0.81
COL18A1-204ENST00000400337 ASIC3Q9UHC3 531 aa20.12■□□□□ 0.81
COL18A1-204ENST00000400337 SEMA3EO15041 775 aa20.12■□□□□ 0.81
COL18A1-204ENST00000400337 CFAP221Q4G0U5 840 aa20.12■□□□□ 0.81
COL18A1-204ENST00000400337 OTUD6AQ7L8S5 288 aa20.12■□□□□ 0.81
COL18A1-204ENST00000400337 NLGN1Q8N2Q7 840 aa20.12■□□□□ 0.81
COL18A1-204ENST00000400337 RNF34Q969K3 372 aa20.12■□□□□ 0.81
COL18A1-204ENST00000400337 LEMD3Q9Y2U8 911 aa20.12■□□□□ 0.81
COL18A1-204ENST00000400337 TMEM232C9JQI7 657 aa20.12■□□□□ 0.81
COL18A1-204ENST00000400337 MRPL11Q9Y3B7 192 aaKnown RBP20.12■□□□□ 0.81
COL18A1-204ENST00000400337 CARMIL3Q8ND23 1372 aa20.12■□□□□ 0.81
COL18A1-204ENST00000400337 ARHGEF16Q5VV41 709 aa20.11■□□□□ 0.81
COL18A1-204ENST00000400337 SYCE1Q8N0S2 351 aa20.11■□□□□ 0.81
COL18A1-204ENST00000400337 PUS7LQ9H0K6 701 aaKnown RBP20.11■□□□□ 0.81
COL18A1-204ENST00000400337 SLC39A2Q9NP94 309 aa20.11■□□□□ 0.81
COL18A1-204ENST00000400337 CDK12Q9NYV4 1490 aaPredicted RBP20.11■□□□□ 0.81
COL18A1-204ENST00000400337 PRKAB2O43741 272 aa20.11■□□□□ 0.81
COL18A1-204ENST00000400337 RASA3Q14644 834 aa20.11■□□□□ 0.81
COL18A1-204ENST00000400337 FAM182BQ5T319 152 aa20.11■□□□□ 0.81
COL18A1-204ENST00000400337 FAM102BQ5T8I3 360 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms