RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 JAG2Q9Y219 1238 aa4.13□□□□□ -1.75
XRN1-202ENST00000392981 IPPQ9Y573 584 aa4.13□□□□□ -1.75
XRN1-202ENST00000392981 EML1O00423 815 aa4.13□□□□□ -1.75
XRN1-202ENST00000392981 TPM2P07951 284 aa4.13□□□□□ -1.75
XRN1-202ENST00000392981 RECQLP46063 649 aaPredicted RBP4.13□□□□□ -1.75
XRN1-202ENST00000392981 GIPRP48546 466 aa4.13□□□□□ -1.75
XRN1-202ENST00000392981 DNM2P50570 870 aa4.13□□□□□ -1.75
XRN1-202ENST00000392981 LRMPQ12912 555 aa4.13□□□□□ -1.75
XRN1-202ENST00000392981 PCBP2Q15366 365 aaKnown RBP eCLIP4.13□□□□□ -1.752e-6■■■■■ 31.1
XRN1-202ENST00000392981 SPRED3Q2MJR0 410 aa4.13□□□□□ -1.75
XRN1-202ENST00000392981 SLC10A6Q3KNW5 377 aa4.13□□□□□ -1.75
XRN1-202ENST00000392981 PDE12Q6L8Q7 609 aaKnown RBP4.13□□□□□ -1.75
XRN1-202ENST00000392981 CFAP161Q6P656 301 aa4.13□□□□□ -1.75
XRN1-202ENST00000392981 C14orf119Q9NWQ9 140 aa4.13□□□□□ -1.75
XRN1-202ENST00000392981 CSADQ9Y600 493 aa4.13□□□□□ -1.75
XRN1-202ENST00000392981 A0A1W2PP55 124 aa4.13□□□□□ -1.75
XRN1-202ENST00000392981 GSG1L2A8MUP6 293 aa4.13□□□□□ -1.75
XRN1-202ENST00000392981 GPR39O43194 453 aa4.13□□□□□ -1.75
XRN1-202ENST00000392981 ESRRAP11474 423 aaPredicted RBP4.13□□□□□ -1.75
XRN1-202ENST00000392981 PDE3AQ14432 1141 aa4.13□□□□□ -1.75
XRN1-202ENST00000392981 PPP2R5DQ14738 602 aa4.13□□□□□ -1.75
XRN1-202ENST00000392981 LLGL2Q6P1M3 1020 aa4.13□□□□□ -1.75
XRN1-202ENST00000392981 NECAB2Q7Z6G3 386 aa4.13□□□□□ -1.75
XRN1-202ENST00000392981 CCDC144CPQ8IYA2 1237 aa4.13□□□□□ -1.75
XRN1-202ENST00000392981 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.13□□□□□ -1.75
XRN1-202ENST00000392981 MAP3K14Q99558 947 aa4.13□□□□□ -1.75
XRN1-202ENST00000392981 RHOBTB2Q9BYZ6 727 aa4.13□□□□□ -1.75
XRN1-202ENST00000392981 SLC12A7Q9Y666 1083 aa4.13□□□□□ -1.75
XRN1-202ENST00000392981 AP3D1O14617 1153 aa4.13□□□□□ -1.75
XRN1-202ENST00000392981 PLD2O14939 933 aa4.13□□□□□ -1.75
XRN1-202ENST00000392981 KPNA5O15131 536 aa4.13□□□□□ -1.75
XRN1-202ENST00000392981 TXLNAP40222 546 aa4.13□□□□□ -1.75
XRN1-202ENST00000392981 RNASE9P60153 205 aaKnown RBP4.13□□□□□ -1.75
XRN1-202ENST00000392981 TRIM68Q6AZZ1 485 aa4.13□□□□□ -1.75
XRN1-202ENST00000392981 CXorf57Q6NSI4 855 aaKnown RBP4.13□□□□□ -1.75
XRN1-202ENST00000392981 CCDC116Q8IYX3 515 aa4.13□□□□□ -1.75
XRN1-202ENST00000392981 MYO19Q96H55 970 aa4.13□□□□□ -1.75
XRN1-202ENST00000392981 AGBL1Q96MI9 1066 aa4.13□□□□□ -1.75
XRN1-202ENST00000392981 STRBPQ96SI9 672 aaKnown RBP4.13□□□□□ -1.75
XRN1-202ENST00000392981 NOL10Q9BSC4 688 aaKnown RBP4.13□□□□□ -1.75
XRN1-202ENST00000392981 FBXL21Q9UKT6 434 aa4.13□□□□□ -1.75
XRN1-202ENST00000392981 TRIM17Q9Y577 477 aa4.13□□□□□ -1.75
XRN1-202ENST00000392981 A0A1W2PQH9 124 aa4.12□□□□□ -1.75
XRN1-202ENST00000392981 CYP2E1P05181 493 aaPredicted RBP4.12□□□□□ -1.75
XRN1-202ENST00000392981 ABCB4P21439 1286 aa4.12□□□□□ -1.75
XRN1-202ENST00000392981 GRB10Q13322 594 aa4.12□□□□□ -1.75
XRN1-202ENST00000392981 TTLL5Q6EMB2 1281 aa4.12□□□□□ -1.75
XRN1-202ENST00000392981 RNF180Q86T96 592 aa4.12□□□□□ -1.75
XRN1-202ENST00000392981 FUBP3Q96I24 572 aaKnown RBP eCLIP4.12□□□□□ -1.75
XRN1-202ENST00000392981 RIC8AQ9NPQ8 531 aa4.12□□□□□ -1.75
XRN1-202ENST00000392981 HAUS2Q9NVX0 235 aa4.12□□□□□ -1.75
XRN1-202ENST00000392981 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.12□□□□□ -1.75
XRN1-202ENST00000392981 NOC2LQ9Y3T9 749 aaKnown RBP4.12□□□□□ -1.75
XRN1-202ENST00000392981 NACADO15069 1562 aa4.12□□□□□ -1.75
XRN1-202ENST00000392981 DNAJC25-GNG10A0A024R161 153 aa4.12□□□□□ -1.75
XRN1-202ENST00000392981 ERICH4A6NGS2 130 aa4.12□□□□□ -1.75
XRN1-202ENST00000392981 GABRDO14764 452 aa4.12□□□□□ -1.75
XRN1-202ENST00000392981 ORC4O43929 436 aa4.12□□□□□ -1.75
XRN1-202ENST00000392981 MGEA5O60502 916 aa4.12□□□□□ -1.75
XRN1-202ENST00000392981 STARD3NLO95772 234 aa4.12□□□□□ -1.75
XRN1-202ENST00000392981 PSAPP07602 524 aa4.12□□□□□ -1.75
XRN1-202ENST00000392981 YARSP54577 528 aaKnown RBP4.12□□□□□ -1.75
XRN1-202ENST00000392981 ZNF267Q14586 743 aaPredicted RBP4.12□□□□□ -1.75
XRN1-202ENST00000392981 INF2Q27J81 1249 aa4.12□□□□□ -1.75
XRN1-202ENST00000392981 MAMSTRQ6ZN01 415 aa4.12□□□□□ -1.75
XRN1-202ENST00000392981 KIAA1211Q6ZU35 1233 aa4.12□□□□□ -1.75
XRN1-202ENST00000392981 SSU72Q9NP77 194 aaKnown RBP4.12□□□□□ -1.75
XRN1-202ENST00000392981 TNKSO95271 1327 aa4.12□□□□□ -1.75
XRN1-202ENST00000392981 LTFP02788 710 aa4.12□□□□□ -1.75
XRN1-202ENST00000392981 GBP1P32455 592 aa4.12□□□□□ -1.75
XRN1-202ENST00000392981 ZBED6P86452 979 aa4.12□□□□□ -1.75
XRN1-202ENST00000392981 TBX2Q13207 712 aaPredicted RBP4.12□□□□□ -1.75
XRN1-202ENST00000392981 PRPF4BQ13523 1007 aaKnown RBP4.12□□□□□ -1.75
XRN1-202ENST00000392981 PRKG1Q13976 671 aa4.12□□□□□ -1.75
XRN1-202ENST00000392981 MAP7Q14244 749 aa4.12□□□□□ -1.75
XRN1-202ENST00000392981 DDB1Q16531 1140 aa4.12□□□□□ -1.75
XRN1-202ENST00000392981 C6orf118Q5T5N4 469 aa4.12□□□□□ -1.75
XRN1-202ENST00000392981 PPP1R26Q5T8A7 1209 aaPredicted RBP4.12□□□□□ -1.75
XRN1-202ENST00000392981 ZBED2Q9BTP6 218 aa4.12□□□□□ -1.75
XRN1-202ENST00000392981 TRIM5Q9C035 493 aa4.12□□□□□ -1.75
XRN1-202ENST00000392981 SAMD15Q9P1V8 674 aa4.12□□□□□ -1.75
XRN1-202ENST00000392981 TRAF6Q9Y4K3 522 aa4.12□□□□□ -1.75
XRN1-202ENST00000392981 FSD2A1L4K1 749 aa4.12□□□□□ -1.75
XRN1-202ENST00000392981 RHPN2P1A8MT19 583 aa4.12□□□□□ -1.75
XRN1-202ENST00000392981 ZNF891A8MT65 544 aaPredicted RBP4.12□□□□□ -1.75
XRN1-202ENST00000392981 CFBP00751 764 aa4.12□□□□□ -1.75
XRN1-202ENST00000392981 GPSM2P81274 684 aa4.12□□□□□ -1.75
XRN1-202ENST00000392981 MPP2Q14168 576 aa4.12□□□□□ -1.75
XRN1-202ENST00000392981 SIM2Q14190 667 aaPredicted RBP4.12□□□□□ -1.75
XRN1-202ENST00000392981 LRRC14Q15048 493 aa4.12□□□□□ -1.75
XRN1-202ENST00000392981 HAUS3Q68CZ6 603 aa4.12□□□□□ -1.75
XRN1-202ENST00000392981 DNAJB7Q7Z6W7 309 aaPredicted RBP4.12□□□□□ -1.75
XRN1-202ENST00000392981 FSD1Q9BTV5 496 aa4.12□□□□□ -1.75
XRN1-202ENST00000392981 SH3GLB2Q9NR46 395 aa4.12□□□□□ -1.75
XRN1-202ENST00000392981 TMEM39AQ9NV64 488 aa4.12□□□□□ -1.75
XRN1-202ENST00000392981 DXOO77932 396 aaKnown RBP4.11□□□□□ -1.75
XRN1-202ENST00000392981 IGFALSP35858 605 aa4.11□□□□□ -1.75
XRN1-202ENST00000392981 SH3BGRP55822 239 aaPredicted RBP4.11□□□□□ -1.75
XRN1-202ENST00000392981 SUMO1P63165 101 aaKnown RBP4.11□□□□□ -1.75
XRN1-202ENST00000392981 ST5P78524 1137 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms