RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 HAND2P61296 217 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 SATB1Q01826 763 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 FUT2Q10981 343 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 NNTQ13423 1086 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 STIM1Q13586 685 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 PLCB4Q15147 1175 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 ZRSR1Q15695 479 aaKnown RBP3.89□□□□□ -1.79
TRAV39-201ENST00000390466 NBPF14Q5TI25 921 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 NAA35Q5VZE5 725 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 PDXDC2PQ6P474 469 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 OLFM4Q6UX06 510 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 MPRIPQ6WCQ1 1025 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 KDM7AQ6ZMT4 941 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 CREG2Q8IUH2 290 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 CNGA4Q8IV77 575 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 CD302Q8IX05 232 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 IQCKQ8N0W5 287 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 FNBP4Q8N3X1 1017 aaPredicted RBP3.89□□□□□ -1.79
TRAV39-201ENST00000390466 PDILTQ8N807 584 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 JMYQ8N9B5 988 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 ANKRD20A12PQ8NF67 263 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 FAM76AQ8TAV0 307 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 MAGEC3Q8TD91 643 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 HDAC7Q8WUI4 952 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 APPBP2Q92624 585 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 SMARCC1Q92922 1105 aaPredicted RBP3.89□□□□□ -1.79
TRAV39-201ENST00000390466 CCDC102AQ96A19 550 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 LRRC59Q96AG4 307 aaKnown RBP3.89□□□□□ -1.79
TRAV39-201ENST00000390466 MIEF2Q96C03 454 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 CABS1Q96KC9 395 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 RPGRIP1Q96KN7 1286 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 MYD88Q99836 296 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 SLF1Q9BQI6 1058 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 LACRTQ9GZZ8 138 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 ACBD3Q9H3P7 528 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 DEF6Q9H4E7 631 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 LY9Q9HBG7 655 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 EPB41L4AQ9HCS5 686 aaPredicted RBP3.89□□□□□ -1.79
TRAV39-201ENST00000390466 GOLGA6AQ9NYA3 693 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 RGS17Q9UGC6 210 aaPredicted RBP3.89□□□□□ -1.79
TRAV39-201ENST00000390466 SLC12A6Q9UHW9 1150 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 FAM184BQ9ULE4 1060 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 SUFUQ9UMX1 484 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 ANGEL1Q9UNK9 670 aaKnown RBP3.89□□□□□ -1.79
TRAV39-201ENST00000390466 TFR2Q9UP52 801 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 TBX22Q9Y458 520 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 FARP1Q9Y4F1 1045 aaPredicted RBP3.89□□□□□ -1.79
TRAV39-201ENST00000390466 PCDHB6Q9Y5E3 794 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 SRPRBQ9Y5M8 271 aaKnown RBP3.89□□□□□ -1.79
TRAV39-201ENST00000390466 EPN1Q9Y6I3 576 aaPredicted RBP3.89□□□□□ -1.79
TRAV39-201ENST00000390466 DOT1LQ8TEK3 1739 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 PDS5AQ29RF7 1337 aaKnown RBP3.89□□□□□ -1.79
TRAV39-201ENST00000390466 TNS3Q68CZ2 1445 aa3.88□□□□□ -1.79
TRAV39-201ENST00000390466 A0A1W2PQC6 194 aa3.88□□□□□ -1.79
TRAV39-201ENST00000390466 TCRBV5S4A2TA0A5A2 114 aa3.88□□□□□ -1.79
TRAV39-201ENST00000390466 TTC26A0AVF1 554 aa3.88□□□□□ -1.79
TRAV39-201ENST00000390466 ZNF233A6NK53 670 aa3.88□□□□□ -1.79
TRAV39-201ENST00000390466 LGALS16A8MUM7 142 aa3.88□□□□□ -1.79
TRAV39-201ENST00000390466 NBPF26B4DH59 902 aa3.88□□□□□ -1.79
TRAV39-201ENST00000390466 H0YGN5 161 aa3.88□□□□□ -1.79
TRAV39-201ENST00000390466 EYA2O00167 538 aa3.88□□□□□ -1.79
TRAV39-201ENST00000390466 EBAG9O00559 213 aa3.88□□□□□ -1.79
TRAV39-201ENST00000390466 CHUKO15111 745 aa3.88□□□□□ -1.79
TRAV39-201ENST00000390466 POLR2DO15514 142 aaKnown RBP3.88□□□□□ -1.79
TRAV39-201ENST00000390466 MEFVO15553 781 aaPredicted RBP3.88□□□□□ -1.79
TRAV39-201ENST00000390466 SRGAP2O75044 1071 aa3.88□□□□□ -1.79
TRAV39-201ENST00000390466 ZMYND10O75800 440 aa3.88□□□□□ -1.79
TRAV39-201ENST00000390466 LCA5LO95447 670 aa3.88□□□□□ -1.79
TRAV39-201ENST00000390466 DDX58O95786 925 aaKnown RBP3.88□□□□□ -1.79
TRAV39-201ENST00000390466 PAEPP09466 180 aa3.88□□□□□ -1.79
TRAV39-201ENST00000390466 IFNAR1P17181 557 aa3.88□□□□□ -1.79
TRAV39-201ENST00000390466 SCP2P22307 547 aa3.88□□□□□ -1.79
TRAV39-201ENST00000390466 CASP1P29466 404 aa3.88□□□□□ -1.79
TRAV39-201ENST00000390466 ECHS1P30084 290 aa3.88□□□□□ -1.79
TRAV39-201ENST00000390466 HNRNPH3P31942 346 aaKnown RBP3.88□□□□□ -1.79
TRAV39-201ENST00000390466 INPP5BP32019 993 aa3.88□□□□□ -1.79
TRAV39-201ENST00000390466 LSP1P33241 339 aa3.88□□□□□ -1.79
TRAV39-201ENST00000390466 ADD2P35612 726 aa3.88□□□□□ -1.79
TRAV39-201ENST00000390466 MAP2K2P36507 400 aa3.88□□□□□ -1.79
TRAV39-201ENST00000390466 LIFRP42702 1097 aa3.88□□□□□ -1.79
TRAV39-201ENST00000390466 GNGT1P63211 74 aa3.88□□□□□ -1.79
TRAV39-201ENST00000390466 HDLBPQ00341 1268 aaKnown RBP3.88□□□□□ -1.79
TRAV39-201ENST00000390466 CDK17Q00537 523 aa3.88□□□□□ -1.79
TRAV39-201ENST00000390466 ACTN3Q08043 901 aaPredicted RBP3.88□□□□□ -1.79
TRAV39-201ENST00000390466 C2orf54Q08AI8 447 aa3.88□□□□□ -1.79
TRAV39-201ENST00000390466 GRIK3Q13003 919 aa3.88□□□□□ -1.79
TRAV39-201ENST00000390466 PDCLQ13371 301 aa3.88□□□□□ -1.79
TRAV39-201ENST00000390466 TRIM14Q14142 442 aa3.88□□□□□ -1.79
TRAV39-201ENST00000390466 ALX1Q15699 326 aa3.88□□□□□ -1.79
TRAV39-201ENST00000390466 PTGISQ16647 500 aa3.88□□□□□ -1.79
TRAV39-201ENST00000390466 AMOTQ4VCS5 1084 aa3.88□□□□□ -1.79
TRAV39-201ENST00000390466 LRRC24Q50LG9 513 aa3.88□□□□□ -1.79
TRAV39-201ENST00000390466 HSP90B2PQ58FF3 399 aa3.88□□□□□ -1.79
TRAV39-201ENST00000390466 EARS2Q5JPH6 523 aaKnown RBP3.88□□□□□ -1.79
TRAV39-201ENST00000390466 SPECC1Q5M775 1068 aa3.88□□□□□ -1.79
TRAV39-201ENST00000390466 CDCA2Q69YH5 1023 aaPredicted RBP3.88□□□□□ -1.79
TRAV39-201ENST00000390466 NBPF10Q6P3W6 841 aaKnown RBP3.88□□□□□ -1.79
TRAV39-201ENST00000390466 EMBQ6PCB8 327 aa3.88□□□□□ -1.79
TRAV39-201ENST00000390466 CYP26C1Q6V0L0 522 aa3.88□□□□□ -1.79
TRAV39-201ENST00000390466 SYNE3Q6ZMZ3 975 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms