RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 ANKRD20A12PQ8NF67 263 aa16.45■□□□□ 0.22
MSH5-201ENST00000375703 ZSWIM4Q9H7M6 989 aa16.45■□□□□ 0.22
MSH5-201ENST00000375703 CYP2D6P10635 497 aa16.45■□□□□ 0.22
MSH5-201ENST00000375703 SPAG1Q07617 926 aa16.45■□□□□ 0.22
MSH5-201ENST00000375703 ZNF658Q5TYW1 1059 aaPredicted RBP16.45■□□□□ 0.22
MSH5-201ENST00000375703 TMTC1Q8IUR5 882 aa16.45■□□□□ 0.22
MSH5-201ENST00000375703 BAZ2AQ9UIF9 1905 aaKnown RBP16.44■□□□□ 0.22
MSH5-201ENST00000375703 KLRK1P26718 216 aa16.44■□□□□ 0.22
MSH5-201ENST00000375703 KIF5BP33176 963 aa16.44■□□□□ 0.22
MSH5-201ENST00000375703 COPB1P53618 953 aaKnown RBP16.44■□□□□ 0.22
MSH5-201ENST00000375703 ARL6IP4Q66PJ3 421 aaKnown RBP16.44■□□□□ 0.22
MSH5-201ENST00000375703 SRGAP1Q7Z6B7 1085 aa16.44■□□□□ 0.22
MSH5-201ENST00000375703 NELFBQ8WX92 580 aa16.44■□□□□ 0.22
MSH5-201ENST00000375703 RMND1Q9NWS8 449 aa16.44■□□□□ 0.22
MSH5-201ENST00000375703 TFCP2L1Q9NZI6 479 aa16.44■□□□□ 0.22
MSH5-201ENST00000375703 TTF2Q9UNY4 1162 aaKnown RBP16.44■□□□□ 0.22
MSH5-201ENST00000375703 STRCQ7RTU9 1775 aa16.44■□□□□ 0.22
MSH5-201ENST00000375703 SASH3O75995 380 aa16.44■□□□□ 0.22
MSH5-201ENST00000375703 RPN1P04843 607 aaKnown RBP16.44■□□□□ 0.22
MSH5-201ENST00000375703 CALML3P27482 149 aa16.44■□□□□ 0.22
MSH5-201ENST00000375703 CDC25AP30304 524 aa16.44■□□□□ 0.22
MSH5-201ENST00000375703 HIBADHP31937 336 aaKnown RBP16.44■□□□□ 0.22
MSH5-201ENST00000375703 LONP1P36776 959 aaKnown RBP16.44■□□□□ 0.22
MSH5-201ENST00000375703 CHMP4BP1P59074 171 aa16.44■□□□□ 0.22
MSH5-201ENST00000375703 TCP11X2Q5H9J9 407 aa16.44■□□□□ 0.22
MSH5-201ENST00000375703 NUP88Q99567 741 aaPredicted RBP16.44■□□□□ 0.22
MSH5-201ENST00000375703 ARPP21Q9UBL0 812 aaPredicted RBP16.44■□□□□ 0.22
MSH5-201ENST00000375703 CDC23Q9UJX2 597 aa16.44■□□□□ 0.22
MSH5-201ENST00000375703 SPATA31A1Q5TZJ5 1347 aa16.43■□□□□ 0.22
MSH5-201ENST00000375703 POLR3GO15318 223 aaPredicted RBP16.43■□□□□ 0.22
MSH5-201ENST00000375703 FECHP22830 423 aa16.43■□□□□ 0.22
MSH5-201ENST00000375703 KIF4BQ2VIQ3 1234 aa16.43■□□□□ 0.22
MSH5-201ENST00000375703 SBK1Q52WX2 424 aa16.43■□□□□ 0.22
MSH5-201ENST00000375703 JAKMIP3Q5VZ66 844 aa16.43■□□□□ 0.22
MSH5-201ENST00000375703 BLIDQ8IZY5 108 aa16.43■□□□□ 0.22
MSH5-201ENST00000375703 TAB2Q9NYJ8 693 aa16.43■□□□□ 0.22
MSH5-201ENST00000375703 PUF60Q9UHX1 559 aaKnown RBP16.43■□□□□ 0.22
MSH5-201ENST00000375703 MAPK8IP1Q9UQF2 711 aa16.43■□□□□ 0.22
MSH5-201ENST00000375703 THRAP3Q9Y2W1 955 aaKnown RBP16.43■□□□□ 0.22
MSH5-201ENST00000375703 KCNJ18B7U540 433 aa16.43■□□□□ 0.22
MSH5-201ENST00000375703 ADAMTS2O95450 1211 aa16.43■□□□□ 0.22
MSH5-201ENST00000375703 PRDX5P30044 214 aa16.43■□□□□ 0.22
MSH5-201ENST00000375703 RPS8P62241 208 aaKnown RBP16.43■□□□□ 0.22
MSH5-201ENST00000375703 KCNJ12Q14500 433 aa16.43■□□□□ 0.22
MSH5-201ENST00000375703 TAF3Q5VWG9 929 aa16.43■□□□□ 0.22
MSH5-201ENST00000375703 CEP112Q8N8E3 955 aa16.43■□□□□ 0.22
MSH5-201ENST00000375703 C4orf32Q8N8J7 132 aa16.43■□□□□ 0.22
MSH5-201ENST00000375703 ACRBPQ8NEB7 543 aa16.43■□□□□ 0.22
MSH5-201ENST00000375703 SMARCC1Q92922 1105 aaPredicted RBP16.43■□□□□ 0.22
MSH5-201ENST00000375703 KAT14Q9H8E8 782 aa16.43■□□□□ 0.22
MSH5-201ENST00000375703 ABHD10Q9NUJ1 306 aa16.43■□□□□ 0.22
MSH5-201ENST00000375703 CTAGE9A4FU28 777 aa16.42■□□□□ 0.22
MSH5-201ENST00000375703 PRCPP42785 496 aa16.42■□□□□ 0.22
MSH5-201ENST00000375703 TUBB2AQ13885 445 aa16.42■□□□□ 0.22
MSH5-201ENST00000375703 RCSD1Q6JBY9 416 aa16.42■□□□□ 0.22
MSH5-201ENST00000375703 CYP26C1Q6V0L0 522 aa16.42■□□□□ 0.22
MSH5-201ENST00000375703 TUBB2BQ9BVA1 445 aa16.42■□□□□ 0.22
MSH5-201ENST00000375703 MYH14Q7Z406 1995 aaKnown RBP16.42■□□□□ 0.22
MSH5-201ENST00000375703 ERICH4A6NGS2 130 aa16.42■□□□□ 0.22
MSH5-201ENST00000375703 RNF225M0QZC1 329 aaPredicted RBP16.42■□□□□ 0.22
MSH5-201ENST00000375703 STAT6P42226 847 aa16.42■□□□□ 0.22
MSH5-201ENST00000375703 ERVK-24P63145 666 aa16.42■□□□□ 0.22
MSH5-201ENST00000375703 SLC4A8Q2Y0W8 1093 aa16.42■□□□□ 0.22
MSH5-201ENST00000375703 SLC10A5Q5PT55 438 aa16.42■□□□□ 0.22
MSH5-201ENST00000375703 MCM9Q9NXL9 1143 aa16.42■□□□□ 0.22
MSH5-201ENST00000375703 CCDC66A2RUB6 948 aa16.41■□□□□ 0.22
MSH5-201ENST00000375703 KCNQ2O43526 872 aa16.41■□□□□ 0.22
MSH5-201ENST00000375703 TFAP4Q01664 338 aa16.41■□□□□ 0.22
MSH5-201ENST00000375703 TRIM14Q14142 442 aa16.41■□□□□ 0.22
MSH5-201ENST00000375703 SLC35F6Q8N357 371 aa16.41■□□□□ 0.22
MSH5-201ENST00000375703 UBXN6Q9BZV1 441 aa16.41■□□□□ 0.22
MSH5-201ENST00000375703 GDAQ9Y2T3 454 aa16.41■□□□□ 0.22
MSH5-201ENST00000375703 H7C1D1 291 aa16.41■□□□□ 0.22
MSH5-201ENST00000375703 KRT9P35527 623 aa16.41■□□□□ 0.22
MSH5-201ENST00000375703 UBXN1Q04323 297 aa16.41■□□□□ 0.22
MSH5-201ENST00000375703 SMC1AQ14683 1233 aaKnown RBP16.41■□□□□ 0.22
MSH5-201ENST00000375703 WWC2Q6AWC2 1192 aa16.41■□□□□ 0.22
MSH5-201ENST00000375703 GPKOWQ92917 476 aaPredicted RBP eCLIP16.41■□□□□ 0.224e-8■■■■□ 19.5
MSH5-201ENST00000375703 FUT8Q9BYC5 575 aa16.41■□□□□ 0.22
MSH5-201ENST00000375703 SH3GLB2Q9NR46 395 aa16.41■□□□□ 0.22
MSH5-201ENST00000375703 PCDHA4Q9UN74 947 aa16.41■□□□□ 0.22
MSH5-201ENST00000375703 LAMB2P55268 1798 aa16.4■□□□□ 0.22
MSH5-201ENST00000375703 CCDC151A5D8V7 595 aa16.4■□□□□ 0.22
MSH5-201ENST00000375703 ABL1P00519 1130 aa16.4■□□□□ 0.22
MSH5-201ENST00000375703 USP17L8P0C7I0 530 aa16.4■□□□□ 0.22
MSH5-201ENST00000375703 CYP2C19P33261 490 aa16.4■□□□□ 0.22
MSH5-201ENST00000375703 BRD3Q15059 726 aa16.4■□□□□ 0.22
MSH5-201ENST00000375703 DTHD1Q6ZMT9 781 aa16.4■□□□□ 0.22
MSH5-201ENST00000375703 LONRF2Q1L5Z9 754 aa16.4■□□□□ 0.22
MSH5-201ENST00000375703 TBC1D9BQ66K14 1250 aa16.4■□□□□ 0.22
MSH5-201ENST00000375703 STAG2Q8N3U4 1231 aa16.4■□□□□ 0.22
MSH5-201ENST00000375703 RASGRP4Q8TDF6 673 aa16.4■□□□□ 0.22
MSH5-201ENST00000375703 NLRP3Q96P20 1036 aa16.4■□□□□ 0.22
MSH5-201ENST00000375703 ANKRD2Q9GZV1 360 aa16.4■□□□□ 0.22
MSH5-201ENST00000375703 ZCCHC17Q9NP64 241 aaKnown RBP16.4■□□□□ 0.22
MSH5-201ENST00000375703 PDS5AQ29RF7 1337 aaKnown RBP16.4■□□□□ 0.22
MSH5-201ENST00000375703 FAM205AQ6ZU69 1335 aa16.4■□□□□ 0.22
MSH5-201ENST00000375703 BAZ2BQ9UIF8 2168 aaKnown RBP16.4■□□□□ 0.22
MSH5-201ENST00000375703 CCDC194A0A1B0GVG4 234 aa16.39■□□□□ 0.22
MSH5-201ENST00000375703 DGKHQ86XP1 1220 aa16.39■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms