RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 ROBO3Q96MS0 1386 aa12.19□□□□□ -0.46
COL5A1-202ENST00000371820 RPTORQ8N122 1335 aa12.19□□□□□ -0.46
COL5A1-202ENST00000371820 CYP2D7A0A087X1C5 515 aa12.19□□□□□ -0.46
COL5A1-202ENST00000371820 GSG1L2A8MUP6 293 aa12.19□□□□□ -0.46
COL5A1-202ENST00000371820 MINDY4BA8MYZ0 360 aa12.19□□□□□ -0.46
COL5A1-202ENST00000371820 PATL2C9JE40 543 aaKnown RBP12.19□□□□□ -0.46
COL5A1-202ENST00000371820 EVI5O60447 810 aa12.19□□□□□ -0.46
COL5A1-202ENST00000371820 BAG4O95429 457 aaKnown RBP12.19□□□□□ -0.46
COL5A1-202ENST00000371820 AKR1B1P15121 316 aa12.19□□□□□ -0.46
COL5A1-202ENST00000371820 ERVK-9P63128 1117 aa12.19□□□□□ -0.46
COL5A1-202ENST00000371820 ERVK-24P63145 666 aa12.19□□□□□ -0.46
COL5A1-202ENST00000371820 TRIM32Q13049 653 aa12.19□□□□□ -0.46
COL5A1-202ENST00000371820 ZMYM1Q5SVZ6 1142 aa12.19□□□□□ -0.46
COL5A1-202ENST00000371820 LBX2Q6XYB7 198 aa12.19□□□□□ -0.46
COL5A1-202ENST00000371820 CATSPERGQ6ZRH7 1159 aa12.19□□□□□ -0.46
COL5A1-202ENST00000371820 ANKLE1Q8NAG6 615 aa12.19□□□□□ -0.46
COL5A1-202ENST00000371820 ACER1Q8TDN7 264 aa12.19□□□□□ -0.46
COL5A1-202ENST00000371820 OTUD7AQ8TE49 926 aaPredicted RBP12.19□□□□□ -0.46
COL5A1-202ENST00000371820 DIS3LQ8TF46 1054 aaKnown RBP12.19□□□□□ -0.46
COL5A1-202ENST00000371820 PAWRQ96IZ0 340 aaKnown RBP12.19□□□□□ -0.46
COL5A1-202ENST00000371820 PAGR1Q9BTK6 254 aa12.19□□□□□ -0.46
COL5A1-202ENST00000371820 RPAP3Q9H6T3 665 aaPredicted RBP12.19□□□□□ -0.46
COL5A1-202ENST00000371820 KANSL2Q9H9L4 492 aa12.19□□□□□ -0.46
COL5A1-202ENST00000371820 DDX49Q9Y6V7 483 aaKnown RBP12.19□□□□□ -0.46
COL5A1-202ENST00000371820 M0R2C6 588 aa12.18□□□□□ -0.46
COL5A1-202ENST00000371820 WDR46O15213 610 aaKnown RBP12.18□□□□□ -0.46
COL5A1-202ENST00000371820 PEX10O60683 326 aa12.18□□□□□ -0.46
COL5A1-202ENST00000371820 MBD3O95983 291 aa12.18□□□□□ -0.46
COL5A1-202ENST00000371820 NCLP19338 710 aaKnown RBP12.18□□□□□ -0.46
COL5A1-202ENST00000371820 MAP3K21Q5TCX8 1036 aa12.18□□□□□ -0.46
COL5A1-202ENST00000371820 NECAB2Q7Z6G3 386 aa12.18□□□□□ -0.46
COL5A1-202ENST00000371820 TRMT44Q8IYL2 757 aaKnown RBP12.18□□□□□ -0.46
COL5A1-202ENST00000371820 SYAP1Q96A49 352 aaPredicted RBP12.18□□□□□ -0.46
COL5A1-202ENST00000371820 NUDT12Q9BQG2 462 aa12.18□□□□□ -0.46
COL5A1-202ENST00000371820 NAPBQ9H115 298 aa12.18□□□□□ -0.46
COL5A1-202ENST00000371820 VCPKMTQ9H867 229 aa12.18□□□□□ -0.46
COL5A1-202ENST00000371820 GOPCQ9HD26 462 aa12.18□□□□□ -0.46
COL5A1-202ENST00000371820 HMX1Q9NP08 348 aaPredicted RBP12.18□□□□□ -0.46
COL5A1-202ENST00000371820 HOXC10Q9NYD6 342 aa12.18□□□□□ -0.46
COL5A1-202ENST00000371820 RBPJLQ9UBG7 517 aa12.18□□□□□ -0.46
COL5A1-202ENST00000371820 TMX2Q9Y320 296 aa12.18□□□□□ -0.46
COL5A1-202ENST00000371820 SZT2Q5T011 3432 aa12.18□□□□□ -0.46
COL5A1-202ENST00000371820 A0A1W2PPC1 479 aa12.17□□□□□ -0.46
COL5A1-202ENST00000371820 XRCC5P13010 732 aaKnown RBP12.17□□□□□ -0.46
COL5A1-202ENST00000371820 CYP2B6P20813 491 aa12.17□□□□□ -0.46
COL5A1-202ENST00000371820 MNX1P50219 401 aaPredicted RBP12.17□□□□□ -0.46
COL5A1-202ENST00000371820 ZNF445P59923 1031 aa12.17□□□□□ -0.46
COL5A1-202ENST00000371820 EVX2Q03828 476 aa12.17□□□□□ -0.46
COL5A1-202ENST00000371820 PDE4BQ07343 736 aa12.17□□□□□ -0.46
COL5A1-202ENST00000371820 COG2Q14746 738 aa12.17□□□□□ -0.46
COL5A1-202ENST00000371820 POTEEQ6S8J3 1075 aa12.17□□□□□ -0.46
COL5A1-202ENST00000371820 IFNL3Q8IZI9 196 aa12.17□□□□□ -0.46
COL5A1-202ENST00000371820 ZNF444Q8N0Y2 327 aaPredicted RBP12.17□□□□□ -0.46
COL5A1-202ENST00000371820 MB21D1Q8N884 522 aa12.17□□□□□ -0.46
COL5A1-202ENST00000371820 TANGO6Q9C0B7 1094 aa12.17□□□□□ -0.46
COL5A1-202ENST00000371820 HELLSQ9NRZ9 838 aa12.17□□□□□ -0.46
COL5A1-202ENST00000371820 A0A1W2PRG0 241 aa12.16□□□□□ -0.46
COL5A1-202ENST00000371820 TRIM6-TRIM34B2RNG4 842 aa12.16□□□□□ -0.46
COL5A1-202ENST00000371820 PRKAR2AP13861 404 aaKnown RBP12.16□□□□□ -0.46
COL5A1-202ENST00000371820 RGS2P41220 211 aa12.16□□□□□ -0.46
COL5A1-202ENST00000371820 ATP2B2Q01814 1243 aa12.16□□□□□ -0.46
COL5A1-202ENST00000371820 PPP4R3BQ5MIZ7 849 aa12.16□□□□□ -0.46
COL5A1-202ENST00000371820 PLEKHH3Q7Z736 793 aa12.16□□□□□ -0.46
COL5A1-202ENST00000371820 RUFY2Q8WXA3 655 aa12.16□□□□□ -0.46
COL5A1-202ENST00000371820 USP6NLQ92738 828 aa12.16□□□□□ -0.46
COL5A1-202ENST00000371820 GZF1Q9H116 711 aaPredicted RBP12.16□□□□□ -0.46
COL5A1-202ENST00000371820 PORCNQ9H237 461 aa12.16□□□□□ -0.46
COL5A1-202ENST00000371820 EPB41L4AQ9HCS5 686 aaPredicted RBP12.16□□□□□ -0.46
COL5A1-202ENST00000371820 OGDHLQ9ULD0 1010 aa12.16□□□□□ -0.46
COL5A1-202ENST00000371820 IVNS1ABPQ9Y6Y0 642 aa12.16□□□□□ -0.46
COL5A1-202ENST00000371820 SPDYE16A6NNV3 312 aaPredicted RBP12.15□□□□□ -0.46
COL5A1-202ENST00000371820 LETM1O95202 739 aaPredicted RBP12.15□□□□□ -0.46
COL5A1-202ENST00000371820 EEF2P13639 858 aaKnown RBP12.15□□□□□ -0.46
COL5A1-202ENST00000371820 ZKSCAN1P17029 563 aaPredicted RBP12.15□□□□□ -0.46
COL5A1-202ENST00000371820 Q3C1V9 767 aa12.15□□□□□ -0.46
COL5A1-202ENST00000371820 MORN1Q5T089 497 aa12.15□□□□□ -0.46
COL5A1-202ENST00000371820 GPR142Q7Z601 462 aa12.15□□□□□ -0.46
COL5A1-202ENST00000371820 PPP1R9BQ96SB3 815 aa12.15□□□□□ -0.46
COL5A1-202ENST00000371820 SEC62Q99442 399 aaKnown RBP12.15□□□□□ -0.46
COL5A1-202ENST00000371820 APBA2Q99767 749 aa12.15□□□□□ -0.46
COL5A1-202ENST00000371820 ESYT1Q9BSJ8 1104 aa12.15□□□□□ -0.46
COL5A1-202ENST00000371820 NBPF3Q9H094 633 aa12.15□□□□□ -0.46
COL5A1-202ENST00000371820 RTN4Q9NQC3 1192 aaKnown RBP12.15□□□□□ -0.46
COL5A1-202ENST00000371820 NYAP2Q9P242 653 aa12.15□□□□□ -0.46
COL5A1-202ENST00000371820 SYNPO2Q9UMS6 1093 aa12.15□□□□□ -0.46
COL5A1-202ENST00000371820 GREB1LQ9C091 1923 aaPredicted RBP12.14□□□□□ -0.47
COL5A1-202ENST00000371820 CNMDO75829 334 aa12.14□□□□□ -0.47
COL5A1-202ENST00000371820 FLOT1O75955 427 aa12.14□□□□□ -0.47
COL5A1-202ENST00000371820 RASA1P20936 1047 aa12.14□□□□□ -0.47
COL5A1-202ENST00000371820 PPARAQ07869 468 aa12.14□□□□□ -0.47
COL5A1-202ENST00000371820 CUL4AQ13619 759 aa12.14□□□□□ -0.47
COL5A1-202ENST00000371820 CSPP1Q1MSJ5 1256 aa12.14□□□□□ -0.47
COL5A1-202ENST00000371820 MCMDC2Q4G0Z9 681 aa12.14□□□□□ -0.47
COL5A1-202ENST00000371820 WDR78Q5VTH9 848 aa12.14□□□□□ -0.47
COL5A1-202ENST00000371820 C7orf61Q8IZ16 206 aa12.14□□□□□ -0.47
COL5A1-202ENST00000371820 STK11IPQ8N1F8 1099 aa12.14□□□□□ -0.47
COL5A1-202ENST00000371820 C11orf49Q9H6J7 331 aa12.14□□□□□ -0.47
COL5A1-202ENST00000371820 A0A0G2JMZ2 1700 aa12.14□□□□□ -0.47
COL5A1-202ENST00000371820 FRMPD3Q5JV73 1810 aa12.14□□□□□ -0.47
COL5A1-202ENST00000371820 LAMA3Q16787 3333 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms